Difference between revisions of "NONHSAT129852"

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sequence = <dnaseq>GTCTGAAGGTGCTGCGGGATGCCGTTCCTTCGCGCGTGAGGCTGCGGCTCTGACGCCCCATAGGCTCCTTCAATTTCCGTGATCCTCGGAGTCCCCAGGAGACCAGGTGATGGCAGCAGCCAGACTCCTGCCAGTGCCGGCAGGACCCCAGGCCAAGCTGACCTTCGAGGATGTGGCTGTGCTCCTCTCCCAGGATGAATGGGACCGCCTGTGCCCTGCTCAGAGGGGTCTCTACAGAAATGTGATGATGGAAACCTATGGGAATGTAGTCTCATTGGGTAAGCCACCTTAGCAGGCCTCGTCTATGTATCTGCGTATTGGACTGGGGTGGGGGCTTCTCAGGGTACGGGGCCTGGGACAGGCTGGTCCTGGAGGTTTGCTCTCATCACCTCTCTGGGTGCTCAGCTCCAGCAGAAGATCAGTCCTGTCCATTTTCATGTCCCCACAAGTGGCTTGGGCAGGGGGAGGGGGCTCTGTAAATGTTGTGTAAACAAAGACTTCCCTCCCCACGAGCAGGACTTCCA</dnaseq>|
 
sequence = <dnaseq>GTCTGAAGGTGCTGCGGGATGCCGTTCCTTCGCGCGTGAGGCTGCGGCTCTGACGCCCCATAGGCTCCTTCAATTTCCGTGATCCTCGGAGTCCCCAGGAGACCAGGTGATGGCAGCAGCCAGACTCCTGCCAGTGCCGGCAGGACCCCAGGCCAAGCTGACCTTCGAGGATGTGGCTGTGCTCCTCTCCCAGGATGAATGGGACCGCCTGTGCCCTGCTCAGAGGGGTCTCTACAGAAATGTGATGATGGAAACCTATGGGAATGTAGTCTCATTGGGTAAGCCACCTTAGCAGGCCTCGTCTATGTATCTGCGTATTGGACTGGGGTGGGGGCTTCTCAGGGTACGGGGCCTGGGACAGGCTGGTCCTGGAGGTTTGCTCTCATCACCTCTCTGGGTGCTCAGCTCCAGCAGAAGATCAGTCCTGTCCATTTTCATGTCCCCACAAGTGGCTTGGGCAGGGGGAGGGGGCTCTGTAAATGTTGTGTAAACAAAGACTTCCCTCCCCACGAGCAGGACTTCCA</dnaseq>|
 
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[[Category:Sense]][[Category:NONHSAG051583]]
+
[[Category:Sense]][[Category:NONHSAG051583]][[Category:Transcripts]]

Latest revision as of 07:11, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT129852

Source

NONCODE4.0

Same with

,

Classification

sense

Length

524 nt

Genomic location

chr8-:146115072..146126838

Exon number

3

Exons

146115072..146115444,146115693..146115788,146126784..146126838

Genome context

Sequence
000001 GTCTGAAGGT GCTGCGGGAT GCCGTTCCTT CGCGCGTGAG GCTGCGGCTC TGACGCCCCA TAGGCTCCTT CAATTTCCGT 000080
000081 GATCCTCGGA GTCCCCAGGA GACCAGGTGA TGGCAGCAGC CAGACTCCTG CCAGTGCCGG CAGGACCCCA GGCCAAGCTG 000160
000161 ACCTTCGAGG ATGTGGCTGT GCTCCTCTCC CAGGATGAAT GGGACCGCCT GTGCCCTGCT CAGAGGGGTC TCTACAGAAA 000240
000241 TGTGATGATG GAAACCTATG GGAATGTAGT CTCATTGGGT AAGCCACCTT AGCAGGCCTC GTCTATGTAT CTGCGTATTG 000320
000321 GACTGGGGTG GGGGCTTCTC AGGGTACGGG GCCTGGGACA GGCTGGTCCT GGAGGTTTGC TCTCATCACC TCTCTGGGTG 000400
000401 CTCAGCTCCA GCAGAAGATC AGTCCTGTCC ATTTTCATGT CCCCACAAGT GGCTTGGGCA GGGGGAGGGG GCTCTGTAAA 000480
000481 TGTTGTGTAA ACAAAGACTT CCCTCCCCAC GAGCAGGACT TCCA
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Predicted Small Protein

Name NONHSAT129852_smProtein_170:244
Length 25
Molecular weight 2615.1041
Aromaticity 0.0416666666667
Instability index 58.9375
Isoelectric point 7.83477783203
Runs 5
Runs residual 0.0267857142857
Runs probability 0.0349231584526
Amino acid sequence MWLCSSPRMNGTACALLRGVSTEM
Secondary structure LEEELLLLLLHHHHHHHHLLLLLL
PRMN -
PiMo -