Difference between revisions of "ENST00000414282.1"
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sequence = <dnaseq>CTCTGCGTGCGCCGGAGGCTGCCGTGGCGGGTGGGCCGCCTGACTTCTCCTCCCGGCCAGTTCTCGAGCGCCTCACCGGGCCTCGCCCTGCAGCCTCGCTCTCGCTGGCGCTGCGCGGCCTAGGGGACTGGGCTGCTGGCCTCCGGGTGCGGGGTGGGGGCAGGCTCCGACCTGGGGCGTCCTGGCCGCGCGAGCCGCGGGATGGGGGCCCGGGCCGCGGAGGAGGCGCCGCTGGTGTGTCCCTTGGTGGAGAGGGCGCTGCCGGCCCTGCGCGGTTTCCAGCCAGGAAGCTTCGGGAAGCCTGGACGTCTGCTCACTGGAGATGACACGTGCGTGGGGTGTTGGCATTCTTGTTATTTAACACGGGAAGGAGGTGACTTCGCCTGTGATGGACTTCCAGTGTGAGCACTGGCCAGAGTGACCAGGCTGACCAGCACCAGCCCTGATCCAGATGCAGAGGCCAGGATGTGGGCCCAGCCCTGTGCCAGGAGGCTGGCTGGAATAAAGAGTAACAAACCCCCTTGGAGGACTCTCCTGCCGGGATGTCCATGTCCGCCTTTGCTCCGAGCTGGGGTCTCATGTCTGTGGTGCTGGAATCCAGAGCCCTGACGGGACAGCAGCAGCAGGAACTCGTTACGCTGCAGCAGGGCCCACACGGACTTGGCTTCCGCCAGGGACACCCGGTTGTCCTTGTTGAAGTCAGCCATGAGCAGGACCTGGCCAACCAGCGCCGGCAGGGAAGGCAGGTCTCCCAGGTTCGCCTGGCGTTTGGGACCAAAAGAAAGGAAAAGCCAGCTGATTTGATGTCTGGGAGCACGACCTGGCCTTTACCTGGTCCTCCTGGCGGGGTGGTCTGCCGGCCAGACCAGCACATCTGCCAGGTTAGGGGTCCCAGCCCACAGCTACACGGGTGGAGGACGCAGCCAGCAATGTGTCAGCTCACTCTGCTGGCCTGTGTGGCTGCTGCCAGACAGACCTCCCGCCTCCTGGCAGCCTTGGGTGCACCTGGGGAGCTCGGGGGTGGGCACCTGGGCAGAGAAGCCTCAGAGCTTCCCTGAGGATGAGAATCGGCACAGGGCAGAGGGCACGCACTGGCTGAAGCCCTGGGAAGCGGCCCCTTTCCACAAGCCCTGGTCTCCATTCGGGGCACCTGCCCTGCTGGACACACGGCCCTTGACTGCAGGAGCCTCCCCTCGACCTCAGCTGCCAGCCCACCGGCGCCCCCAACCCTTGCCCCCAGCCCTGGAGAGGCTCCTTCCCTGGCAGGGCTCATGCCCAGGGGCTGGGGGATGGGAGGTCTGCCCAGGGTCCACTTGGGCCCATCTGTGCCTTTGCGCTGGGCATGTTGGTGCCAGGGCCGCCTGCTGGGCATATGACCGTGGTGTGGACTCCTGCCCTGCCCCCTAGGAGAGCTGCCTGACCTTGAGGAAGCTGAGGGTCATCTCCCGGAATTCCTTGATGGAGGTGCCCCGGGTGGGCTTGTCAAACAGTACCAGCTCCCGCCGGGGGGCCGCATCCGACCGGGCCTTGGAGTCGAGGGTCTCCTCAATGCCACACTTGATGGTTACATCCTTGTCCCGCCAGAGCCCGCTGTACACCTGGACAGGGCCACAGAGGTCCTCCGTGCAGACATCCCCCTCCCACTGCACGGGCAGTATCAGCCCCAGGCCCACCCGCCCTGCCAGTGGCTATACCTGCTGGCCCGGGGCCACCGAGAGGCAGGTCCTCCACTCCACCATATGCAGCTCACACAGGTCCTGGCAGACGGAGCCCGAGATGATCCCCTTGCGGTACTGGTCACACTGAGGAGACAGGTGCAGGCGTGCCGGGCGGGGCAGCCACACCCCTGCCCCACTGAGCCCCTGCCCACAGGCCCGAAGCTGGCAGGGGCCTCCACTTGCTGCAGTTGGAAAGCTGCCAGCCCCTCACACAGGCAGTGCCGGGGCCCTGGGTCATGCCATTGGTGGCTGCAGGATGGGGCTGTCGGCTGCAGGGGCAGCCCCGCCAACCCTCCGGTCCGGTCCCGTCCCCACCATCCTGGCTCCTGTAACAGGACGGCACAGCAAAGGCCACTGCCTGGACATGAGACACACACCACACCCAGTGTCGACCCCACGCCAGGGCCAGAGGCAGGAACCTGGAGGCAGCTCTCCGCCCAGCCGACCCAGCTCTGGACCATCCAGGCATTGGCCGGTGAACTAGAATTCACACTAGTCCCTAATATCTACACCACCAGCTGCCACACGCGCGCTCTCTGCCTGACTCTTCATTCCTGCCTCGGGTGACGCCAGGAGGGAGGATGCACCCCCTGACTCATGGCGCCCTCCCTGCCCGGAATAGTAAGTGAGACATTTCTG</dnaseq>| | sequence = <dnaseq>CTCTGCGTGCGCCGGAGGCTGCCGTGGCGGGTGGGCCGCCTGACTTCTCCTCCCGGCCAGTTCTCGAGCGCCTCACCGGGCCTCGCCCTGCAGCCTCGCTCTCGCTGGCGCTGCGCGGCCTAGGGGACTGGGCTGCTGGCCTCCGGGTGCGGGGTGGGGGCAGGCTCCGACCTGGGGCGTCCTGGCCGCGCGAGCCGCGGGATGGGGGCCCGGGCCGCGGAGGAGGCGCCGCTGGTGTGTCCCTTGGTGGAGAGGGCGCTGCCGGCCCTGCGCGGTTTCCAGCCAGGAAGCTTCGGGAAGCCTGGACGTCTGCTCACTGGAGATGACACGTGCGTGGGGTGTTGGCATTCTTGTTATTTAACACGGGAAGGAGGTGACTTCGCCTGTGATGGACTTCCAGTGTGAGCACTGGCCAGAGTGACCAGGCTGACCAGCACCAGCCCTGATCCAGATGCAGAGGCCAGGATGTGGGCCCAGCCCTGTGCCAGGAGGCTGGCTGGAATAAAGAGTAACAAACCCCCTTGGAGGACTCTCCTGCCGGGATGTCCATGTCCGCCTTTGCTCCGAGCTGGGGTCTCATGTCTGTGGTGCTGGAATCCAGAGCCCTGACGGGACAGCAGCAGCAGGAACTCGTTACGCTGCAGCAGGGCCCACACGGACTTGGCTTCCGCCAGGGACACCCGGTTGTCCTTGTTGAAGTCAGCCATGAGCAGGACCTGGCCAACCAGCGCCGGCAGGGAAGGCAGGTCTCCCAGGTTCGCCTGGCGTTTGGGACCAAAAGAAAGGAAAAGCCAGCTGATTTGATGTCTGGGAGCACGACCTGGCCTTTACCTGGTCCTCCTGGCGGGGTGGTCTGCCGGCCAGACCAGCACATCTGCCAGGTTAGGGGTCCCAGCCCACAGCTACACGGGTGGAGGACGCAGCCAGCAATGTGTCAGCTCACTCTGCTGGCCTGTGTGGCTGCTGCCAGACAGACCTCCCGCCTCCTGGCAGCCTTGGGTGCACCTGGGGAGCTCGGGGGTGGGCACCTGGGCAGAGAAGCCTCAGAGCTTCCCTGAGGATGAGAATCGGCACAGGGCAGAGGGCACGCACTGGCTGAAGCCCTGGGAAGCGGCCCCTTTCCACAAGCCCTGGTCTCCATTCGGGGCACCTGCCCTGCTGGACACACGGCCCTTGACTGCAGGAGCCTCCCCTCGACCTCAGCTGCCAGCCCACCGGCGCCCCCAACCCTTGCCCCCAGCCCTGGAGAGGCTCCTTCCCTGGCAGGGCTCATGCCCAGGGGCTGGGGGATGGGAGGTCTGCCCAGGGTCCACTTGGGCCCATCTGTGCCTTTGCGCTGGGCATGTTGGTGCCAGGGCCGCCTGCTGGGCATATGACCGTGGTGTGGACTCCTGCCCTGCCCCCTAGGAGAGCTGCCTGACCTTGAGGAAGCTGAGGGTCATCTCCCGGAATTCCTTGATGGAGGTGCCCCGGGTGGGCTTGTCAAACAGTACCAGCTCCCGCCGGGGGGCCGCATCCGACCGGGCCTTGGAGTCGAGGGTCTCCTCAATGCCACACTTGATGGTTACATCCTTGTCCCGCCAGAGCCCGCTGTACACCTGGACAGGGCCACAGAGGTCCTCCGTGCAGACATCCCCCTCCCACTGCACGGGCAGTATCAGCCCCAGGCCCACCCGCCCTGCCAGTGGCTATACCTGCTGGCCCGGGGCCACCGAGAGGCAGGTCCTCCACTCCACCATATGCAGCTCACACAGGTCCTGGCAGACGGAGCCCGAGATGATCCCCTTGCGGTACTGGTCACACTGAGGAGACAGGTGCAGGCGTGCCGGGCGGGGCAGCCACACCCCTGCCCCACTGAGCCCCTGCCCACAGGCCCGAAGCTGGCAGGGGCCTCCACTTGCTGCAGTTGGAAAGCTGCCAGCCCCTCACACAGGCAGTGCCGGGGCCCTGGGTCATGCCATTGGTGGCTGCAGGATGGGGCTGTCGGCTGCAGGGGCAGCCCCGCCAACCCTCCGGTCCGGTCCCGTCCCCACCATCCTGGCTCCTGTAACAGGACGGCACAGCAAAGGCCACTGCCTGGACATGAGACACACACCACACCCAGTGTCGACCCCACGCCAGGGCCAGAGGCAGGAACCTGGAGGCAGCTCTCCGCCCAGCCGACCCAGCTCTGGACCATCCAGGCATTGGCCGGTGAACTAGAATTCACACTAGTCCCTAATATCTACACCACCAGCTGCCACACGCGCGCTCTCTGCCTGACTCTTCATTCCTGCCTCGGGTGACGCCAGGAGGGAGGATGCACCCCCTGACTCATGGCGCCCTCCCTGCCCGGAATAGTAAGTGAGACATTTCTG</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:lnc-LCN6-1]][[Category:NONHSAG053806]] | + | [[Category:Intergenic]][[Category:lnc-LCN6-1]][[Category:NONHSAG053806]][[Category:ENSG00000233016.2]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 14:51, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000414282.1 |
Source |
Gencode19 |
Same with |
lnc-LCN6-1:3,NONHSAT135575 |
Classification |
intergenic |
Length |
2357 nt |
Genomic location |
chr9-:139615818..139622636 |
Exon number |
6 |
Exons |
139615818..139617563,139618349..139618452,139619507..139619562,139620763..139620868,139621498..139621538,139622333..139622636 |
Genome context |
|
Sequence |
000001 CTCTGCGTGC GCCGGAGGCT GCCGTGGCGG GTGGGCCGCC TGACTTCTCC TCCCGGCCAG TTCTCGAGCG CCTCACCGGG 000080
000081 CCTCGCCCTG CAGCCTCGCT CTCGCTGGCG CTGCGCGGCC TAGGGGACTG GGCTGCTGGC CTCCGGGTGC GGGGTGGGGG 000160 000161 CAGGCTCCGA CCTGGGGCGT CCTGGCCGCG CGAGCCGCGG GATGGGGGCC CGGGCCGCGG AGGAGGCGCC GCTGGTGTGT 000240 000241 CCCTTGGTGG AGAGGGCGCT GCCGGCCCTG CGCGGTTTCC AGCCAGGAAG CTTCGGGAAG CCTGGACGTC TGCTCACTGG 000320 000321 AGATGACACG TGCGTGGGGT GTTGGCATTC TTGTTATTTA ACACGGGAAG GAGGTGACTT CGCCTGTGAT GGACTTCCAG 000400 000401 TGTGAGCACT GGCCAGAGTG ACCAGGCTGA CCAGCACCAG CCCTGATCCA GATGCAGAGG CCAGGATGTG GGCCCAGCCC 000480 000481 TGTGCCAGGA GGCTGGCTGG AATAAAGAGT AACAAACCCC CTTGGAGGAC TCTCCTGCCG GGATGTCCAT GTCCGCCTTT 000560 000561 GCTCCGAGCT GGGGTCTCAT GTCTGTGGTG CTGGAATCCA GAGCCCTGAC GGGACAGCAG CAGCAGGAAC TCGTTACGCT 000640 000641 GCAGCAGGGC CCACACGGAC TTGGCTTCCG CCAGGGACAC CCGGTTGTCC TTGTTGAAGT CAGCCATGAG CAGGACCTGG 000720 000721 CCAACCAGCG CCGGCAGGGA AGGCAGGTCT CCCAGGTTCG CCTGGCGTTT GGGACCAAAA GAAAGGAAAA GCCAGCTGAT 000800 000801 TTGATGTCTG GGAGCACGAC CTGGCCTTTA CCTGGTCCTC CTGGCGGGGT GGTCTGCCGG CCAGACCAGC ACATCTGCCA 000880 000881 GGTTAGGGGT CCCAGCCCAC AGCTACACGG GTGGAGGACG CAGCCAGCAA TGTGTCAGCT CACTCTGCTG GCCTGTGTGG 000960 000961 CTGCTGCCAG ACAGACCTCC CGCCTCCTGG CAGCCTTGGG TGCACCTGGG GAGCTCGGGG GTGGGCACCT GGGCAGAGAA 001040 001041 GCCTCAGAGC TTCCCTGAGG ATGAGAATCG GCACAGGGCA GAGGGCACGC ACTGGCTGAA GCCCTGGGAA GCGGCCCCTT 001120 001121 TCCACAAGCC CTGGTCTCCA TTCGGGGCAC CTGCCCTGCT GGACACACGG CCCTTGACTG CAGGAGCCTC CCCTCGACCT 001200 001201 CAGCTGCCAG CCCACCGGCG CCCCCAACCC TTGCCCCCAG CCCTGGAGAG GCTCCTTCCC TGGCAGGGCT CATGCCCAGG 001280 001281 GGCTGGGGGA TGGGAGGTCT GCCCAGGGTC CACTTGGGCC CATCTGTGCC TTTGCGCTGG GCATGTTGGT GCCAGGGCCG 001360 001361 CCTGCTGGGC ATATGACCGT GGTGTGGACT CCTGCCCTGC CCCCTAGGAG AGCTGCCTGA CCTTGAGGAA GCTGAGGGTC 001440 001441 ATCTCCCGGA ATTCCTTGAT GGAGGTGCCC CGGGTGGGCT TGTCAAACAG TACCAGCTCC CGCCGGGGGG CCGCATCCGA 001520 001521 CCGGGCCTTG GAGTCGAGGG TCTCCTCAAT GCCACACTTG ATGGTTACAT CCTTGTCCCG CCAGAGCCCG CTGTACACCT 001600 001601 GGACAGGGCC ACAGAGGTCC TCCGTGCAGA CATCCCCCTC CCACTGCACG GGCAGTATCA GCCCCAGGCC CACCCGCCCT 001680 001681 GCCAGTGGCT ATACCTGCTG GCCCGGGGCC ACCGAGAGGC AGGTCCTCCA CTCCACCATA TGCAGCTCAC ACAGGTCCTG 001760 001761 GCAGACGGAG CCCGAGATGA TCCCCTTGCG GTACTGGTCA CACTGAGGAG ACAGGTGCAG GCGTGCCGGG CGGGGCAGCC 001840 001841 ACACCCCTGC CCCACTGAGC CCCTGCCCAC AGGCCCGAAG CTGGCAGGGG CCTCCACTTG CTGCAGTTGG AAAGCTGCCA 001920 001921 GCCCCTCACA CAGGCAGTGC CGGGGCCCTG GGTCATGCCA TTGGTGGCTG CAGGATGGGG CTGTCGGCTG CAGGGGCAGC 002000 002001 CCCGCCAACC CTCCGGTCCG GTCCCGTCCC CACCATCCTG GCTCCTGTAA CAGGACGGCA CAGCAAAGGC CACTGCCTGG 002080 002081 ACATGAGACA CACACCACAC CCAGTGTCGA CCCCACGCCA GGGCCAGAGG CAGGAACCTG GAGGCAGCTC TCCGCCCAGC 002160 002161 CGACCCAGCT CTGGACCATC CAGGCATTGG CCGGTGAACT AGAATTCACA CTAGTCCCTA ATATCTACAC CACCAGCTGC 002240 002241 CACACGCGCG CTCTCTGCCT GACTCTTCAT TCCTGCCTCG GGTGACGCCA GGAGGGAGGA TGCACCCCCT GACTCATGGC 002320 002321 GCCCTCCCTG CCCGGAATAG TAAGTGAGAC ATTTCTG |