Difference between revisions of "NONHSAT035878"
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sequence = <dnaseq>GAGCCTGCTGGGATCTTTGCAGTTTGCAGGtcatagaatcagacatgaaaaggcttctcttccgacgtcattggttcctggctcctttacagatgagaacacaggtccagagGCATAAAGAGAAACAAAAGACAATGATGGTATTCTCTGTGTCCTCAGCTTTGGCACTTTTGTTGATGTTGCTAAGGAGCAGTGACCTTGCTAAAAAGACTGAATAATCCACCCACTGAATAGCTAACCTGGGGAGGAAATGAAAATTTCCTTTGTGGATCTCCCCAAATCCATTGTTGTCACCAGGCCCTCCCAGAACCTCCTCAGTTCCTTCACAGTGCAACCCTGTGTACTTGGCCCGCAACCCAATAGTATTGTGCCTCACTTCACCTTCCATGGGCAACTGCCCTCCCTTCTGGACATAAAACCTCATATTTTAAATAAAGTTGAAATATGAAAAGAAAGTA</dnaseq>| | sequence = <dnaseq>GAGCCTGCTGGGATCTTTGCAGTTTGCAGGtcatagaatcagacatgaaaaggcttctcttccgacgtcattggttcctggctcctttacagatgagaacacaggtccagagGCATAAAGAGAAACAAAAGACAATGATGGTATTCTCTGTGTCCTCAGCTTTGGCACTTTTGTTGATGTTGCTAAGGAGCAGTGACCTTGCTAAAAAGACTGAATAATCCACCCACTGAATAGCTAACCTGGGGAGGAAATGAAAATTTCCTTTGTGGATCTCCCCAAATCCATTGTTGTCACCAGGCCCTCCCAGAACCTCCTCAGTTCCTTCACAGTGCAACCCTGTGTACTTGGCCCGCAACCCAATAGTATTGTGCCTCACTTCACCTTCCATGGGCAACTGCCCTCCCTTCTGGACATAAAACCTCATATTTTAAATAAAGTTGAAATATGAAAAGAAAGTA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:NONHSAG014488]] | + | [[Category:Intergenic]][[Category:NONHSAG014488]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 21:33, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT035878 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
458 nt |
| Genomic location |
chr14-:23765124..23766076 |
| Exon number |
2 |
| Exons |
23765124..23765469,23765965..23766076 |
| Genome context |
|
| Sequence |
000001 GAGCCTGCTG GGATCTTTGC AGTTTGCAGG tcatagaatc agacatgaaa aggcttctct tccgacgtca ttggttcctg 000080
000081 gctcctttac agatgagaac acaggtccag agGCATAAAG AGAAACAAAA GACAATGATG GTATTCTCTG TGTCCTCAGC 000160 000161 TTTGGCACTT TTGTTGATGT TGCTAAGGAG CAGTGACCTT GCTAAAAAGA CTGAATAATC CACCCACTGA ATAGCTAACC 000240 000241 TGGGGAGGAA ATGAAAATTT CCTTTGTGGA TCTCCCCAAA TCCATTGTTG TCACCAGGCC CTCCCAGAAC CTCCTCAGTT 000320 000321 CCTTCACAGT GCAACCCTGT GTACTTGGCC CGCAACCCAA TAGTATTGTG CCTCACTTCA CCTTCCATGG GCAACTGCCC 000400 000401 TCCCTTCTGG ACATAAAACC TCATATTTTA AATAAAGTTG AAATATGAAA AGAAAGTA |
Predicted Small Protein
| Name | NONHSAT035878_smProtein_44:217 |
| Length | 58 |
| Molecular weight | 6830.237 |
| Aromaticity | 0.0701754385965 |
| Instability index | 65.9964912281 |
| Isoelectric point | 11.7339477539 |
| Runs | 10 |
| Runs residual | 0.0214912280702 |
| Runs probability | 0.0407701819468 |
| Amino acid sequence | MKRLLFRRHWFLAPLQMRTQVQRHKEKQKTMMVFSVSSALALLLMLLRSSDLAKKTE |
| Secondary structure | LHHHHHHHHHHHLHHHHHHHHHHHHHHLLEEEEEHHHHHHHHHHHHHHLHHHHHLLL |
| PRMN | - |
| PiMo | - |
