Difference between revisions of "Lnc-WDR27-1:5"

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sequence = <dnaseq>CTCGTTTGAAAGTGTCGGTAACAGGCTCTGTGTCTGAACCAAAGTTTCCCTTGCAACCTGGTGTGGCTGCATGATGGAGTTTGGGCCGTGACATATGGTGGGTTTGACGTGTGCCACTCTTAGGGCCAACTTCTAAAGCCTCCAAGACACAGCCCCATGCCCTGTGCCCTTCTGCAGCTCAGAGCAGATGAGCCCAGTGACCTTGAGGCCCTTGAAGATGGTGGAACCAGGAGACATGAGGGGCCTTGGCCTGGAAACACAACTCGAAGGGAAATCACTCATCTGGAAAACGTGTTTGGACCCATACCACACCGTGGCAAATACCTGGTAAAACTGTCATCTGAAATTGCTTGGAAATAGGACACTACCACCTAAACCCACAGCTCGTAGGCCAGGGCACCTCAACTGTAGTCCCCAGACCAGCAGCATCGGTGTTACCTGGAAAATTAAAAATGCAAAGTTTTGGGCCCACTTCAGACCCCAGGTCAGAAATTGTGGGTTGCAGAAATCTGTGTTTTAATAACCCTTCAGATGACTGTGGTGCCCGACAAAGTTGAAATGCCTGCTCCCATGTGTGCTGGGTTTAGTTTGTGCTTTAGCAAAGCGGGATAAGAAAGAAAGGAGGCCAGGATGGAATTCGCTGGTTTCCAACTAGAAGTGACAGAAAATAGAAAGAGTCCAGTAATGTGAGGTCTTGAAGTGTTGGGAGAATTCATTCATCACTTCTAGATTCCAGACAATCAGAAATAAAATTTTAAAAGTCTTTCAATGACAAACTAAGACTTCTCAGTTGGGAAAAAAAAAAAAAAAGGACTCAGTCTTGTTGCAGACATGAGATGAAGAGTGTGGTCTTTTCACAAATGCCTGTGCAAGGGAGTCAAGGACAGAAGCCATCCGGTGGGCTCCTTGGCACGGGGGCGGCTGAAGCAAACCAACCAGGAGCCCACGCAGCTGTCAAGGGCTTGTGTCAGCAAGTAAAGCCTAGACTGCTTGTGACTGTGAAGTGTAAAAGTGCCCCTGGGTCCTCAGGCCTGTGGACAGGACAAAGCCAAAGCCGCCCAGCGCCGTGTGATGCGGCCACAGAGAACACGAGCCTCGGGAGAGAGGAGCCTGGGGCTGGAAAACAAGGGTGAAGGACGCTCCCCTCTGGCTGCAGGAGAGGGGCTGCTGAGGGCAAGATCCATCATTTCTTGGGACCAATGATGCTGCTTCCTACTCTCTGCTTTCTGCCTGGGAGTTTTGTCTGGGACGCCTGTGTCTGCCCCACTCACTGTGTGGTGCAAGCTCCATTTCCAGTGAGGACAACCGTGGCTGCCGAGAGCACCTTACAAGCCAGGCATCCTCCTCTGAGCTCAAGGCAGCCTTGAGAAGTGGGACGAAGACTTCCTTCACGGGAAGAGGAGCGGCTCAGAGAAAGGAAGAGGCTAGTCCAGAACCACCACGTGGACATCTTCTGTGAAGGCCCTGGGGTGAAGGGCACAGGTGGGATTCAGAATAGAAATGACTCGAGGGACGCAAGGAGTTGGGATCAGAAGAAGCAGCAGAAACTCCTGCTCTGCAGACACAGCAGACATTACTGGGAAAGACACCAGAGACCCAGGAGTTCACCCAAGTCCTCTGCACACTGTCTTCCCAGCCCTCTCTCCTGGATCTGAGATGATTTCACTTAAAAACACAAGCCTTTGCTTAAAGGTAGATGAACATTCCTTTCAGTTTCTAAGATGGGGGGCCCACGGTCCTAGGCGCTGAGTCAGAAACTTTTTAGATGTCCCCAGAGTGCACAGGTTTAAGGACAGAGGGAGATTCTCAGTCTTCCTGGGTCCTCCCTGTCTCTCAGCCCAGTCATCACACTCTAAATCCCAGGGACTTGACTCTGCCTTCCAATAGTTCTCAGATCCACCTACTTTGCTCCCTTCTTTCAGAGCGCAGGTAGCCACTTGCTCTCCCAGAGAGTGCTGCAGCGGTGATGATCGGTTTCCCCCCTCCCCACCTGCTCAGTCCTGCAAAGCCTGGACTCTGCTCCAAGGCCTTTGGGACCCAACACCTGCTTTCCAGCCTCAGGGCCTCAGGCCTGAGACCACAGGGGCTCTTCCCGGCGGCTGTACCTCCTGCCATTCACCTGCTGATTTCTT</dnaseq>|
 
sequence = <dnaseq>CTCGTTTGAAAGTGTCGGTAACAGGCTCTGTGTCTGAACCAAAGTTTCCCTTGCAACCTGGTGTGGCTGCATGATGGAGTTTGGGCCGTGACATATGGTGGGTTTGACGTGTGCCACTCTTAGGGCCAACTTCTAAAGCCTCCAAGACACAGCCCCATGCCCTGTGCCCTTCTGCAGCTCAGAGCAGATGAGCCCAGTGACCTTGAGGCCCTTGAAGATGGTGGAACCAGGAGACATGAGGGGCCTTGGCCTGGAAACACAACTCGAAGGGAAATCACTCATCTGGAAAACGTGTTTGGACCCATACCACACCGTGGCAAATACCTGGTAAAACTGTCATCTGAAATTGCTTGGAAATAGGACACTACCACCTAAACCCACAGCTCGTAGGCCAGGGCACCTCAACTGTAGTCCCCAGACCAGCAGCATCGGTGTTACCTGGAAAATTAAAAATGCAAAGTTTTGGGCCCACTTCAGACCCCAGGTCAGAAATTGTGGGTTGCAGAAATCTGTGTTTTAATAACCCTTCAGATGACTGTGGTGCCCGACAAAGTTGAAATGCCTGCTCCCATGTGTGCTGGGTTTAGTTTGTGCTTTAGCAAAGCGGGATAAGAAAGAAAGGAGGCCAGGATGGAATTCGCTGGTTTCCAACTAGAAGTGACAGAAAATAGAAAGAGTCCAGTAATGTGAGGTCTTGAAGTGTTGGGAGAATTCATTCATCACTTCTAGATTCCAGACAATCAGAAATAAAATTTTAAAAGTCTTTCAATGACAAACTAAGACTTCTCAGTTGGGAAAAAAAAAAAAAAAGGACTCAGTCTTGTTGCAGACATGAGATGAAGAGTGTGGTCTTTTCACAAATGCCTGTGCAAGGGAGTCAAGGACAGAAGCCATCCGGTGGGCTCCTTGGCACGGGGGCGGCTGAAGCAAACCAACCAGGAGCCCACGCAGCTGTCAAGGGCTTGTGTCAGCAAGTAAAGCCTAGACTGCTTGTGACTGTGAAGTGTAAAAGTGCCCCTGGGTCCTCAGGCCTGTGGACAGGACAAAGCCAAAGCCGCCCAGCGCCGTGTGATGCGGCCACAGAGAACACGAGCCTCGGGAGAGAGGAGCCTGGGGCTGGAAAACAAGGGTGAAGGACGCTCCCCTCTGGCTGCAGGAGAGGGGCTGCTGAGGGCAAGATCCATCATTTCTTGGGACCAATGATGCTGCTTCCTACTCTCTGCTTTCTGCCTGGGAGTTTTGTCTGGGACGCCTGTGTCTGCCCCACTCACTGTGTGGTGCAAGCTCCATTTCCAGTGAGGACAACCGTGGCTGCCGAGAGCACCTTACAAGCCAGGCATCCTCCTCTGAGCTCAAGGCAGCCTTGAGAAGTGGGACGAAGACTTCCTTCACGGGAAGAGGAGCGGCTCAGAGAAAGGAAGAGGCTAGTCCAGAACCACCACGTGGACATCTTCTGTGAAGGCCCTGGGGTGAAGGGCACAGGTGGGATTCAGAATAGAAATGACTCGAGGGACGCAAGGAGTTGGGATCAGAAGAAGCAGCAGAAACTCCTGCTCTGCAGACACAGCAGACATTACTGGGAAAGACACCAGAGACCCAGGAGTTCACCCAAGTCCTCTGCACACTGTCTTCCCAGCCCTCTCTCCTGGATCTGAGATGATTTCACTTAAAAACACAAGCCTTTGCTTAAAGGTAGATGAACATTCCTTTCAGTTTCTAAGATGGGGGGCCCACGGTCCTAGGCGCTGAGTCAGAAACTTTTTAGATGTCCCCAGAGTGCACAGGTTTAAGGACAGAGGGAGATTCTCAGTCTTCCTGGGTCCTCCCTGTCTCTCAGCCCAGTCATCACACTCTAAATCCCAGGGACTTGACTCTGCCTTCCAATAGTTCTCAGATCCACCTACTTTGCTCCCTTCTTTCAGAGCGCAGGTAGCCACTTGCTCTCCCAGAGAGTGCTGCAGCGGTGATGATCGGTTTCCCCCCTCCCCACCTGCTCAGTCCTGCAAAGCCTGGACTCTGCTCCAAGGCCTTTGGGACCCAACACCTGCTTTCCAGCCTCAGGGCCTCAGGCCTGAGACCACAGGGGCTCTTCCCGGCGGCTGTACCTCCTGCCATTCACCTGCTGATTTCTT</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:lnc-WDR27-1]]
+
[[Category:Intergenic]][[Category:lnc-WDR27-1]][[Category:NONHSAG045479]][[Category:Transcripts]]

Latest revision as of 05:40, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-WDR27-1:5

Source

LNCipedia2.1

Same with

NONHSAT116206

Classification

intergenic

Length

2132 nt

Genomic location

chr6-:169827133..169830752

Exon number

3

Exons

169827133..169827803,169828875..169830318,169830736..169830752

Genome context

Sequence
000001 CTCGTTTGAA AGTGTCGGTA ACAGGCTCTG TGTCTGAACC AAAGTTTCCC TTGCAACCTG GTGTGGCTGC ATGATGGAGT 000080
000081 TTGGGCCGTG ACATATGGTG GGTTTGACGT GTGCCACTCT TAGGGCCAAC TTCTAAAGCC TCCAAGACAC AGCCCCATGC 000160
000161 CCTGTGCCCT TCTGCAGCTC AGAGCAGATG AGCCCAGTGA CCTTGAGGCC CTTGAAGATG GTGGAACCAG GAGACATGAG 000240
000241 GGGCCTTGGC CTGGAAACAC AACTCGAAGG GAAATCACTC ATCTGGAAAA CGTGTTTGGA CCCATACCAC ACCGTGGCAA 000320
000321 ATACCTGGTA AAACTGTCAT CTGAAATTGC TTGGAAATAG GACACTACCA CCTAAACCCA CAGCTCGTAG GCCAGGGCAC 000400
000401 CTCAACTGTA GTCCCCAGAC CAGCAGCATC GGTGTTACCT GGAAAATTAA AAATGCAAAG TTTTGGGCCC ACTTCAGACC 000480
000481 CCAGGTCAGA AATTGTGGGT TGCAGAAATC TGTGTTTTAA TAACCCTTCA GATGACTGTG GTGCCCGACA AAGTTGAAAT 000560
000561 GCCTGCTCCC ATGTGTGCTG GGTTTAGTTT GTGCTTTAGC AAAGCGGGAT AAGAAAGAAA GGAGGCCAGG ATGGAATTCG 000640
000641 CTGGTTTCCA ACTAGAAGTG ACAGAAAATA GAAAGAGTCC AGTAATGTGA GGTCTTGAAG TGTTGGGAGA ATTCATTCAT 000720
000721 CACTTCTAGA TTCCAGACAA TCAGAAATAA AATTTTAAAA GTCTTTCAAT GACAAACTAA GACTTCTCAG TTGGGAAAAA 000800
000801 AAAAAAAAAA GGACTCAGTC TTGTTGCAGA CATGAGATGA AGAGTGTGGT CTTTTCACAA ATGCCTGTGC AAGGGAGTCA 000880
000881 AGGACAGAAG CCATCCGGTG GGCTCCTTGG CACGGGGGCG GCTGAAGCAA ACCAACCAGG AGCCCACGCA GCTGTCAAGG 000960
000961 GCTTGTGTCA GCAAGTAAAG CCTAGACTGC TTGTGACTGT GAAGTGTAAA AGTGCCCCTG GGTCCTCAGG CCTGTGGACA 001040
001041 GGACAAAGCC AAAGCCGCCC AGCGCCGTGT GATGCGGCCA CAGAGAACAC GAGCCTCGGG AGAGAGGAGC CTGGGGCTGG 001120
001121 AAAACAAGGG TGAAGGACGC TCCCCTCTGG CTGCAGGAGA GGGGCTGCTG AGGGCAAGAT CCATCATTTC TTGGGACCAA 001200
001201 TGATGCTGCT TCCTACTCTC TGCTTTCTGC CTGGGAGTTT TGTCTGGGAC GCCTGTGTCT GCCCCACTCA CTGTGTGGTG 001280
001281 CAAGCTCCAT TTCCAGTGAG GACAACCGTG GCTGCCGAGA GCACCTTACA AGCCAGGCAT CCTCCTCTGA GCTCAAGGCA 001360
001361 GCCTTGAGAA GTGGGACGAA GACTTCCTTC ACGGGAAGAG GAGCGGCTCA GAGAAAGGAA GAGGCTAGTC CAGAACCACC 001440
001441 ACGTGGACAT CTTCTGTGAA GGCCCTGGGG TGAAGGGCAC AGGTGGGATT CAGAATAGAA ATGACTCGAG GGACGCAAGG 001520
001521 AGTTGGGATC AGAAGAAGCA GCAGAAACTC CTGCTCTGCA GACACAGCAG ACATTACTGG GAAAGACACC AGAGACCCAG 001600
001601 GAGTTCACCC AAGTCCTCTG CACACTGTCT TCCCAGCCCT CTCTCCTGGA TCTGAGATGA TTTCACTTAA AAACACAAGC 001680
001681 CTTTGCTTAA AGGTAGATGA ACATTCCTTT CAGTTTCTAA GATGGGGGGC CCACGGTCCT AGGCGCTGAG TCAGAAACTT 001760
001761 TTTAGATGTC CCCAGAGTGC ACAGGTTTAA GGACAGAGGG AGATTCTCAG TCTTCCTGGG TCCTCCCTGT CTCTCAGCCC 001840
001841 AGTCATCACA CTCTAAATCC CAGGGACTTG ACTCTGCCTT CCAATAGTTC TCAGATCCAC CTACTTTGCT CCCTTCTTTC 001920
001921 AGAGCGCAGG TAGCCACTTG CTCTCCCAGA GAGTGCTGCA GCGGTGATGA TCGGTTTCCC CCCTCCCCAC CTGCTCAGTC 002000
002001 CTGCAAAGCC TGGACTCTGC TCCAAGGCCT TTGGGACCCA ACACCTGCTT TCCAGCCTCA GGGCCTCAGG CCTGAGACCA 002080
002081 CAGGGGCTCT TCCCGGCGGC TGTACCTCCT GCCATTCACC TGCTGATTTC TT
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