Difference between revisions of "NONHSAT013065"
(One intermediate revision by one other user not shown) | |||
Line 42: | Line 42: | ||
sequence = <dnaseq>GGGGGCGCTGTGCCTCGCCCGGAGCCTCACCCAGAGCCTTCTGGGGTGGTGGATAGGTGAGGACCTCATCGAGGTTTGAGACTTAAATACCTCTCTACTAAAAGGGAAATGGATAAAAAGATGCTGACTGCCAGGCTGGTTTCGGATCCTTTGTATTCTGTCAGATGAGAACACTTGTTTACCTTCCAGGACTGACCTGAGCATGAGTTTCTAAgaggcaacatcgtctcatgaaagcaggcctagaccagaagtaggaaaatctctcctcattcaaaggtcagcttgccatttgccagccatgctatcctcagcagcttctccttctgcaaagttgggataacaaaaaagtttccctccttgccaacctcctctggtgactgggataagcacacaagatgatgtacatcaagacacAACACTCCCAGCAAACAATGGCATCCCAGCGGACTCTTGTGGACTGCCTGCCACGTGATGGCTTTAGCTTCAATTCTACTGCCGATTCTGCTAAAGCGAGGGAGGAGTCGCAGACACTATTGAAATGAGGCTTTTAAggccaggtgcggtggctcatgcctgtaatcccagcactttgggaggccgaggctggtggatcatgagatcaggagatcgagaccatcttggctaacatggtgaaaccccgtctctactaaaaacatacaaaaaaaaattcgccatgcatggtggcgggcgcctgtagtcccagctactcgggaggctgag</dnaseq>| | sequence = <dnaseq>GGGGGCGCTGTGCCTCGCCCGGAGCCTCACCCAGAGCCTTCTGGGGTGGTGGATAGGTGAGGACCTCATCGAGGTTTGAGACTTAAATACCTCTCTACTAAAAGGGAAATGGATAAAAAGATGCTGACTGCCAGGCTGGTTTCGGATCCTTTGTATTCTGTCAGATGAGAACACTTGTTTACCTTCCAGGACTGACCTGAGCATGAGTTTCTAAgaggcaacatcgtctcatgaaagcaggcctagaccagaagtaggaaaatctctcctcattcaaaggtcagcttgccatttgccagccatgctatcctcagcagcttctccttctgcaaagttgggataacaaaaaagtttccctccttgccaacctcctctggtgactgggataagcacacaagatgatgtacatcaagacacAACACTCCCAGCAAACAATGGCATCCCAGCGGACTCTTGTGGACTGCCTGCCACGTGATGGCTTTAGCTTCAATTCTACTGCCGATTCTGCTAAAGCGAGGGAGGAGTCGCAGACACTATTGAAATGAGGCTTTTAAggccaggtgcggtggctcatgcctgtaatcccagcactttgggaggccgaggctggtggatcatgagatcaggagatcgagaccatcttggctaacatggtgaaaccccgtctctactaaaaacatacaaaaaaaaattcgccatgcatggtggcgggcgcctgtagtcccagctactcgggaggctgag</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:NONHSAG005758]] | + | [[Category:Intergenic]][[Category:NONHSAG005758]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 20:08, 16 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT013065 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
744 nt |
Genomic location |
chr10-:45556875..45567068 |
Exon number |
5 |
Exons |
45556875..45557088,45557710..45558032,45560975..45561061,45561623..45561669,45566996..45567068 |
Genome context |
|
Sequence |
000001 GGGGGCGCTG TGCCTCGCCC GGAGCCTCAC CCAGAGCCTT CTGGGGTGGT GGATAGGTGA GGACCTCATC GAGGTTTGAG 000080
000081 ACTTAAATAC CTCTCTACTA AAAGGGAAAT GGATAAAAAG ATGCTGACTG CCAGGCTGGT TTCGGATCCT TTGTATTCTG 000160 000161 TCAGATGAGA ACACTTGTTT ACCTTCCAGG ACTGACCTGA GCATGAGTTT CTAAgaggca acatcgtctc atgaaagcag 000240 000241 gcctagacca gaagtaggaa aatctctcct cattcaaagg tcagcttgcc atttgccagc catgctatcc tcagcagctt 000320 000321 ctccttctgc aaagttggga taacaaaaaa gtttccctcc ttgccaacct cctctggtga ctgggataag cacacaagat 000400 000401 gatgtacatc aagacacAAC ACTCCCAGCA AACAATGGCA TCCCAGCGGA CTCTTGTGGA CTGCCTGCCA CGTGATGGCT 000480 000481 TTAGCTTCAA TTCTACTGCC GATTCTGCTA AAGCGAGGGA GGAGTCGCAG ACACTATTGA AATGAGGCTT TTAAggccag 000560 000561 gtgcggtggc tcatgcctgt aatcccagca ctttgggagg ccgaggctgg tggatcatga gatcaggaga tcgagaccat 000640 000641 cttggctaac atggtgaaac cccgtctcta ctaaaaacat acaaaaaaaa attcgccatg catggtggcg ggcgcctgta 000720 000721 gtcccagcta ctcgggaggc tgag |
Predicted Small Protein
Name | NONHSAT013065_smProtein_398:544 |
Length | 49 |
Molecular weight | 5452.0995 |
Aromaticity | 0.0625 |
Instability index | 44.0083333333 |
Isoelectric point | 7.94000244141 |
Runs | 9 |
Runs residual | 0.0219298245614 |
Runs probability | 0.02114859958 |
Amino acid sequence | MMYIKTQHSQQTMASQRTLVDCLPRDGFSFNSTADSAKAREESQTLLK |
Secondary structure | LEEEELLLLHHHHHHHHHHHHHLLLLLLEELLHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |