Difference between revisions of "NONHSAT067158"
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sequence = <dnaseq>GGATCGTGCATTGTGCCATGACAAGTGTCCCATGCTTGGGGATAGTAACCCAGGCTAAATCGCTGTCCTCGGTCCACATCCCCCACCCCAGCTTTCATGCCTACCTGGAAGGGGCCCTCATCTTCAGTCGCTTTCTCTCTCCCAGGCCACAGTGGCTGCCTTCACAGCCAGCGAGGGCCACGCACATCCCAGGGTAGTGGAGCTACCCAAGACGGATGAGGGCCTAGGCTTCAACATCATGGGTGGCAAAGAGCAAAACTCGCCCATCTACATCTCCCGGGTCATCCCAGGGGGTGTGGCTGACCGCCATGGAGGCCTCAAGCGTGGGGATCAACTGTTGTCGGTGAACGGTGTGAGCGTTGAGGGTGAGCAGCATGAGAAGGCGGTGGAGCTGCTGAAGGCGGCCCAGGGCTCGGTGAAGCTGGTTGTCCGTTACACACCGCGAGTGCTGGAGGAGATGGAGGCCCGGTTCGAGAAGATGCGCTCTGCCCGCCGG</dnaseq>| | sequence = <dnaseq>GGATCGTGCATTGTGCCATGACAAGTGTCCCATGCTTGGGGATAGTAACCCAGGCTAAATCGCTGTCCTCGGTCCACATCCCCCACCCCAGCTTTCATGCCTACCTGGAAGGGGCCCTCATCTTCAGTCGCTTTCTCTCTCCCAGGCCACAGTGGCTGCCTTCACAGCCAGCGAGGGCCACGCACATCCCAGGGTAGTGGAGCTACCCAAGACGGATGAGGGCCTAGGCTTCAACATCATGGGTGGCAAAGAGCAAAACTCGCCCATCTACATCTCCCGGGTCATCCCAGGGGGTGTGGCTGACCGCCATGGAGGCCTCAAGCGTGGGGATCAACTGTTGTCGGTGAACGGTGTGAGCGTTGAGGGTGAGCAGCATGAGAAGGCGGTGGAGCTGCTGAAGGCGGCCCAGGGCTCGGTGAAGCTGGTTGTCCGTTACACACCGCGAGTGCTGGAGGAGATGGAGGCCCGGTTCGAGAAGATGCGCTCTGCCCGCCGG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]][[Category:NONHSAG026222]] | + | [[Category:Sense]][[Category:NONHSAG026222]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 23:00, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT067158 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
496 nt |
| Genomic location |
chr19+:49619375..49621252 |
| Exon number |
2 |
| Exons |
49619375..49619729,49621112..49621252 |
| Genome context |
|
| Sequence |
000001 GGATCGTGCA TTGTGCCATG ACAAGTGTCC CATGCTTGGG GATAGTAACC CAGGCTAAAT CGCTGTCCTC GGTCCACATC 000080
000081 CCCCACCCCA GCTTTCATGC CTACCTGGAA GGGGCCCTCA TCTTCAGTCG CTTTCTCTCT CCCAGGCCAC AGTGGCTGCC 000160 000161 TTCACAGCCA GCGAGGGCCA CGCACATCCC AGGGTAGTGG AGCTACCCAA GACGGATGAG GGCCTAGGCT TCAACATCAT 000240 000241 GGGTGGCAAA GAGCAAAACT CGCCCATCTA CATCTCCCGG GTCATCCCAG GGGGTGTGGC TGACCGCCAT GGAGGCCTCA 000320 000321 AGCGTGGGGA TCAACTGTTG TCGGTGAACG GTGTGAGCGT TGAGGGTGAG CAGCATGAGA AGGCGGTGGA GCTGCTGAAG 000400 000401 GCGGCCCAGG GCTCGGTGAA GCTGGTTGTC CGTTACACAC CGCGAGTGCT GGAGGAGATG GAGGCCCGGT TCGAGAAGAT 000480 000481 GCGCTCTGCC CGCCGG |
Predicted Small Protein
| Name | NONHSAT067158_smProtein_17:196 |
| Length | 60 |
| Molecular weight | 6434.411 |
| Aromaticity | 0.0847457627119 |
| Instability index | 61.8949152542 |
| Isoelectric point | 10.0444946289 |
| Runs | 7 |
| Runs residual | 0.0258124708443 |
| Runs probability | 0.0217906982613 |
| Amino acid sequence | MTSVPCLGIVTQAKSLSSVHIPHPSFHAYLEGALIFSRFLSPRPQWLPSQPARATHIPG |
| Secondary structure | LLLLLLLLEEELLLLLLLLLLLLLLHHHHHHHHHHLLEELLLLLLLLLLLLLLLLLLLL |
| PRMN | - |
| PiMo | - |
