Difference between revisions of "NONHSAT067418"
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sequence = <dnaseq>CTGCACCCAGCACTGTCATGCCTCACTGGCCTCACCAGAAGTCCGTAATCCTCCTCCTTCTGATGCCCGCTCTTTGTGTCTGGGAAAGCTGGGAGGAGAATCAAAGTCGAGGGCCTTACAGGCAGCAGAAGGTGAGGAGACCCAGTTATTGAAGGTAAATCCCAGAGATAACTCCAATCCATCTGCAGGCACCACATGGCCTGTATCAGGAGTGATGCTGGGGGTGGTCGGGGGAGCTGGAGCCACAGCCCTGGTCTTCCTGTCCTTCTGCGTCATCTTCATCGTAGTGAGGTCCTGCAGGAAGAAATCAGCAAGGCCAGCAGCGGGCATCAGGGATATGGGCATGGAGGATGCAAACGCTGTCAGGGGCTCAGCCTATCAGGTGAGCGATGTGGGCATCTCCATACCCAGCATTCAGCCTGGACACCTCCCACAGG</dnaseq>| | sequence = <dnaseq>CTGCACCCAGCACTGTCATGCCTCACTGGCCTCACCAGAAGTCCGTAATCCTCCTCCTTCTGATGCCCGCTCTTTGTGTCTGGGAAAGCTGGGAGGAGAATCAAAGTCGAGGGCCTTACAGGCAGCAGAAGGTGAGGAGACCCAGTTATTGAAGGTAAATCCCAGAGATAACTCCAATCCATCTGCAGGCACCACATGGCCTGTATCAGGAGTGATGCTGGGGGTGGTCGGGGGAGCTGGAGCCACAGCCCTGGTCTTCCTGTCCTTCTGCGTCATCTTCATCGTAGTGAGGTCCTGCAGGAAGAAATCAGCAAGGCCAGCAGCGGGCATCAGGGATATGGGCATGGAGGATGCAAACGCTGTCAGGGGCTCAGCCTATCAGGTGAGCGATGTGGGCATCTCCATACCCAGCATTCAGCCTGGACACCTCCCACAGG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:NONHSAG026351]] | + | [[Category:Intergenic]][[Category:NONHSAG026351]][[Category:Transcripts]] |
Latest revision as of 23:02, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT067418 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
437 nt |
| Genomic location |
chr19+:51690238..51691051 |
| Exon number |
2 |
| Exons |
51690238..51690522,51690900..51691051 |
| Genome context |
|
| Sequence |
000001 CTGCACCCAG CACTGTCATG CCTCACTGGC CTCACCAGAA GTCCGTAATC CTCCTCCTTC TGATGCCCGC TCTTTGTGTC 000080
000081 TGGGAAAGCT GGGAGGAGAA TCAAAGTCGA GGGCCTTACA GGCAGCAGAA GGTGAGGAGA CCCAGTTATT GAAGGTAAAT 000160 000161 CCCAGAGATA ACTCCAATCC ATCTGCAGGC ACCACATGGC CTGTATCAGG AGTGATGCTG GGGGTGGTCG GGGGAGCTGG 000240 000241 AGCCACAGCC CTGGTCTTCC TGTCCTTCTG CGTCATCTTC ATCGTAGTGA GGTCCTGCAG GAAGAAATCA GCAAGGCCAG 000320 000321 CAGCGGGCAT CAGGGATATG GGCATGGAGG ATGCAAACGC TGTCAGGGGC TCAGCCTATC AGGTGAGCGA TGTGGGCATC 000400 000401 TCCATACCCA GCATTCAGCC TGGACACCTC CCACAGG |
Predicted Small Protein
| Name | NONHSAT067418_smProtein_17:151 |
| Length | 45 |
| Molecular weight | 5376.2067 |
| Aromaticity | 0.113636363636 |
| Instability index | 83.3931818182 |
| Isoelectric point | 9.62127685547 |
| Runs | 7 |
| Runs residual | 0.00401069518717 |
| Runs probability | 0.0409443056501 |
| Amino acid sequence | MPHWPHQKSVILLLLMPALCVWESWEENQSRGPYRQQKVRRPSY |
| Secondary structure | LLLLLLLHHHHHHHHLLLLEEELLHHHHLLLLLLLLLLLLLLLL |
| PRMN | - |
| PiMo | - |
