Difference between revisions of "ENST00000422657.1"

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sequence = <dnaseq>GGCATCACCTGGGCACACTGTCTCTCCAGGGCACCTCCCTACCCTGGCTGGGCCTCCACTTTCCCTTCTCTAATATGGGCACTCAGGGCCCGGGGTCATCTTTTCTGCAGGAAGCTCACCCACCAGACTCCCACATTGCCTAGCAGCTGGGGTTGGAGCCCAAGGCTTCACTCTCCTCTCCCCACCACCCCATGCTAGGCCCAAGGGCAGCACCACAAAGGGGCACTGCCAGGCGCCTCCACCCCAGACACTTGTGAGGGCTCCAGGACACCAGGTCTGGCACATTCCCATCCTGGGGACCTAACAGGCTAGCAGGCGAGGCAGACAGTTGGCCAGTTAGCTCCAGTCCTAGGTAGATGGAGAATGGCCTTTCCGAGAGGTCCCAGCAGGAGGATGTGACAATGGAGGGACAAAGCAGAGGCTTCCGGCCCTCGCTGGTCTCCTGTGCTCCAAGACATCTTCCACAAAGGATTTCCTGGACTCCCCCCCAACACTTGTGCAAAGCCAAGTCTACTCTGGGTAAGGAAGACATGATTCCCACCAAGCAACAGTGAGGGCCTCCCTCTCCTAGCACTCTAGATGCAAAGCTGTTGGCCAACATCCCTCAGTAAACGGAGGACATAGAAAACAATGTCAGCTCCTGGCACTGCAGACTCCCTTGCTCTAGGCATGGATTCTTCTGATTTCAGAGACTGTTTCCAGCATAATGGTCCCTCACGCTACCCCTTCCATGGCCTCTGACCATCAGCCTTCCAAATCTAAAGGTGAACATTTATTCTTTCCCCCAAACCATCCCGTAGCAACTGAGCCTGCTGAGACCTTGATTCAGCCATCTCTTCTCCCTCAAGGGCACAACTGATCAGCAAGCCTTCTATGTATTCATCCTGGTTGCATATTTAGAAAATAAATGGACCGGCCAATCACAGAGGCCTGCCCTTTAGGCTGCTGCTGAACCTCACTCACTGGGGTGTGGCTGCAGAAGCTACCATCTGAACCACATGCATCCACCTTGTCCATGAGGACATTGTGAGATTTCACCCAGTATCTTCTGGAATCCAGGTGATGCGGCCGGCCAACAGCACGTCTTGTACTACTAACCAGTCACCCTGCTGGAAGAGGAACTGGGGTGGATGGAGTGCTTTTCAAA</dnaseq>|
 
sequence = <dnaseq>GGCATCACCTGGGCACACTGTCTCTCCAGGGCACCTCCCTACCCTGGCTGGGCCTCCACTTTCCCTTCTCTAATATGGGCACTCAGGGCCCGGGGTCATCTTTTCTGCAGGAAGCTCACCCACCAGACTCCCACATTGCCTAGCAGCTGGGGTTGGAGCCCAAGGCTTCACTCTCCTCTCCCCACCACCCCATGCTAGGCCCAAGGGCAGCACCACAAAGGGGCACTGCCAGGCGCCTCCACCCCAGACACTTGTGAGGGCTCCAGGACACCAGGTCTGGCACATTCCCATCCTGGGGACCTAACAGGCTAGCAGGCGAGGCAGACAGTTGGCCAGTTAGCTCCAGTCCTAGGTAGATGGAGAATGGCCTTTCCGAGAGGTCCCAGCAGGAGGATGTGACAATGGAGGGACAAAGCAGAGGCTTCCGGCCCTCGCTGGTCTCCTGTGCTCCAAGACATCTTCCACAAAGGATTTCCTGGACTCCCCCCCAACACTTGTGCAAAGCCAAGTCTACTCTGGGTAAGGAAGACATGATTCCCACCAAGCAACAGTGAGGGCCTCCCTCTCCTAGCACTCTAGATGCAAAGCTGTTGGCCAACATCCCTCAGTAAACGGAGGACATAGAAAACAATGTCAGCTCCTGGCACTGCAGACTCCCTTGCTCTAGGCATGGATTCTTCTGATTTCAGAGACTGTTTCCAGCATAATGGTCCCTCACGCTACCCCTTCCATGGCCTCTGACCATCAGCCTTCCAAATCTAAAGGTGAACATTTATTCTTTCCCCCAAACCATCCCGTAGCAACTGAGCCTGCTGAGACCTTGATTCAGCCATCTCTTCTCCCTCAAGGGCACAACTGATCAGCAAGCCTTCTATGTATTCATCCTGGTTGCATATTTAGAAAATAAATGGACCGGCCAATCACAGAGGCCTGCCCTTTAGGCTGCTGCTGAACCTCACTCACTGGGGTGTGGCTGCAGAAGCTACCATCTGAACCACATGCATCCACCTTGTCCATGAGGACATTGTGAGATTTCACCCAGTATCTTCTGGAATCCAGGTGATGCGGCCGGCCAACAGCACGTCTTGTACTACTAACCAGTCACCCTGCTGGAAGAGGAACTGGGGTGGATGGAGTGCTTTTCAAA</dnaseq>|
 
}}
 
}}
[[Category:Intronic(AS)]][[Category:lnc-MRPS25-3]]
+
[[Category:Intronic(AS)]][[Category:lnc-MRPS25-3]][[Category:NONHSAG034506]][[Category:Transcripts]][[Category:Transcripts]]

Latest revision as of 15:08, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000422657.1

Source

Gencode19

Same with

lnc-MRPS25-3:1,NONHSAT088360

Classification

intronic(AS)

Length

1147 nt

Genomic location

chr3-:14806459..14808947

Exon number

2

Exons

14806459..14807139,14808482..14808947

Genome context

Sequence
000001 GGCATCACCT GGGCACACTG TCTCTCCAGG GCACCTCCCT ACCCTGGCTG GGCCTCCACT TTCCCTTCTC TAATATGGGC 000080
000081 ACTCAGGGCC CGGGGTCATC TTTTCTGCAG GAAGCTCACC CACCAGACTC CCACATTGCC TAGCAGCTGG GGTTGGAGCC 000160
000161 CAAGGCTTCA CTCTCCTCTC CCCACCACCC CATGCTAGGC CCAAGGGCAG CACCACAAAG GGGCACTGCC AGGCGCCTCC 000240
000241 ACCCCAGACA CTTGTGAGGG CTCCAGGACA CCAGGTCTGG CACATTCCCA TCCTGGGGAC CTAACAGGCT AGCAGGCGAG 000320
000321 GCAGACAGTT GGCCAGTTAG CTCCAGTCCT AGGTAGATGG AGAATGGCCT TTCCGAGAGG TCCCAGCAGG AGGATGTGAC 000400
000401 AATGGAGGGA CAAAGCAGAG GCTTCCGGCC CTCGCTGGTC TCCTGTGCTC CAAGACATCT TCCACAAAGG ATTTCCTGGA 000480
000481 CTCCCCCCCA ACACTTGTGC AAAGCCAAGT CTACTCTGGG TAAGGAAGAC ATGATTCCCA CCAAGCAACA GTGAGGGCCT 000560
000561 CCCTCTCCTA GCACTCTAGA TGCAAAGCTG TTGGCCAACA TCCCTCAGTA AACGGAGGAC ATAGAAAACA ATGTCAGCTC 000640
000641 CTGGCACTGC AGACTCCCTT GCTCTAGGCA TGGATTCTTC TGATTTCAGA GACTGTTTCC AGCATAATGG TCCCTCACGC 000720
000721 TACCCCTTCC ATGGCCTCTG ACCATCAGCC TTCCAAATCT AAAGGTGAAC ATTTATTCTT TCCCCCAAAC CATCCCGTAG 000800
000801 CAACTGAGCC TGCTGAGACC TTGATTCAGC CATCTCTTCT CCCTCAAGGG CACAACTGAT CAGCAAGCCT TCTATGTATT 000880
000881 CATCCTGGTT GCATATTTAG AAAATAAATG GACCGGCCAA TCACAGAGGC CTGCCCTTTA GGCTGCTGCT GAACCTCACT 000960
000961 CACTGGGGTG TGGCTGCAGA AGCTACCATC TGAACCACAT GCATCCACCT TGTCCATGAG GACATTGTGA GATTTCACCC 001040
001041 AGTATCTTCT GGAATCCAGG TGATGCGGCC GGCCAACAGC ACGTCTTGTA CTACTAACCA GTCACCCTGC TGGAAGAGGA 001120
001121 ACTGGGGTGG ATGGAGTGCT TTTCAAA
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