Difference between revisions of "Lnc-AC092329.1-1:7"
| Line 42: | Line 42: | ||
sequence = <dnaseq>TAATTTTTTGTATTTTTAGTAGAGAAGGATTCCTCCATGTTGGTCAGGCTGGTCTCAAACTTCTGACCTCAGGTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATCAGCCACTGTGCCCGGCGACTCTTTTCTTACGTGGGCTTTGCTAATAGTAGAGATTGTGACCTATCTCTGGGCCCAGCACCTAGATATTATGACTGTCCTACCCTGCCTGGTCCATGCCCACAGAAAAGAGTGACTTATCACTAGGCTTAACACACAAGTGATTCGATTCTTCTGCATGATCCCAGCCCACATGGCTTATTGTGACATATCTAGACCCATCACCTAGATGATGTAACTCTCCTTTTCTTTCTGGGAACTGTCCATAATGAGGATTGTGACACATCACTTGGCCCAGCACTTATGTGATATGACTCTCTTCTTTTGCCTGGGCTTATCAAATTGGGTGATTATGTCATATAGCTGTACTCAGCTCCTAGGTTATGTGTCTCTCCTGTTTCTCCTGAGTCCAACCCACAGAGGTCATTGCAACATATCTCTGAGCCCCTAATTTACGTAGTTTGACTCCTGCCTGGGCCCTCCCTTCAGTGATTTTTGTGACATATTTTTTGACTCAGCACCTAGGTAATGTGACTCTTCTCCACTGCTTGGACTCTGTCACAGAAGGTATTGTGATGTATCACTGGGCCTGACACCTAGGTGAAGGTACTGTCTTCTCCTGCCTGGGCCCTGCATAAATTGTATATTTTGACATGTCACTGGGTTCAACACATGGGTGATTCAACTCTCTCACATGGACCTTGAGCATGGGGTTATTAGGACATTTATTTTTGTTCATCTCAGTGATATGACTCCTTTCCTCCCTGAACCCTGTCAAAAAGAAAGATTGTGACATATCACTTAAACCAGAACTTAGGTGATGAGACTCTTCTGTCTAGCAACCACTTATTTTGGGTATTGTGACATTTCACTGGGCCAAACACCTAAAAAATGGGAGGCTCCTGCCTCAGCCCTGTCCACATATATCTGGACATATATCTGCATCCATTACATAAAACATGTGATACCTTTTCTGCCTGTACCCTGCCCACAGGAAAGATTGTGACACTGCAGGGCCTGGCCGCCAGCTGTTGTGTCTCACCTGAATGTACATAACTTTCAGGAGAAAGTTGTAACATGTCACTGGTTGAAAACCCAGATGATGTGACTCTCCTGGCTTTTCACAGCCCTCAGGGAAAAAATTTACATATCAGTGGCCCAGCATCCAGGTGATGCGACTCTCCTGGGTGCTTTCTGCCAACAAGTTGATTGGTAACATATATCTCATCCCAGCTCACAGGTTTGATGATGACTCTAATACTTCATACCAGTCAATAGAAGAGATAGTGTCTCTCACAGCTAGGCTTAGAAAAAGGAGTAAAATCTCAGGTCTCCTCTCTGCATGAAGGTTATAGCGAATCACCACTCTCATATATTGTATAAAGCACTCAGATGATACAGAGCATGTCATCATAGGACCCAGCAAACAGGTTAGATCATGTTTCATGTAAGCGCTCCCTGACAATTTTTAGAATTGTCATCGTCACACATGGTGAAAGTCCACTGATGAGGTCATAATTCTCATGCACAGATGCAGTCCACAGTTAAAATTGTAACTATCATATGTAAACGTGGCCACAGTTGAGATGGTGACTCATTTCTAAACCCAGCTCATAGGTGAGTGAGGACTCTCCTCTCTGGACCCAGCCAATTGAAGAGATGTTGACCCATACCTAGACTTAGGACCACATAAGATCATGGGTCCAAAGCAGCGCAAAGTTCTCAGAGTAGGTTGCAACTCATACAGTCCTCAAGAGAGTGCCCTTACAGGGCCAAGCACACAGGTGAGATTGTCAAACTTACATTCACACCCAGTCAATAGCAAAGATTGTCATTTACTTAAACACACCCTACTTTTGAGGTTCTGAATCTCACTTTTGGAGGCAGTTGAATGTTGGAAAATTGACTCTCATTTGTGTGGATTTTGTCCACATTTGGGTGACTCTTTAATCAAAATTCAGCACACCTTTGTGACTGTAACTTCACTAAGGAGCTTTATTTATTTAGAGATGAAGTTTCATTCTTGTAACCCAGGCTGGAGTGCGGTGGCGTGATCTCCGCTCACTGCAACCTCTGCCTACTGGGTTCAAGCGATTCTCCTGCCTGATTCTCCCAAGTAGCTGGGATTACAGGTGCTCACTACCATGTTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGCTTTACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCGCCCACCTCGGCCTCCCAAAATGCTGAGATTACAGGTGTGAGCCACCGTGCCCAGTCTAAGGCACACAATTTGCAAAGGAAATTGAGGCTCTCGCACAAATCCAGTCCACCCTGTACTTACACCCAACATGCAGGAGGTGTTGACTCTCATCCCTTGACTCAGGACATGTGTGTAATTGTTAATGTCATCGCAAGGCCTTTTGACAAGTGTAATTGTGACATATACCTTGGCCTAGCATCTGAGTTATTTGTTGTTTCCTGGGTCCAGCTCACAGTGCCATATCACTGGATCCAGACCCTTGGTAATGTGATTCTATTCTGCCTTGATACAGCCCACAGGGGTCATTGTGACATCGCTGGGCATTGCACCTAGGTGATTTGAGTCTCCTCTTCTGCCTTGGTGCTGCCCACAGGTGTATTGTGACATATTGCTGGGCGTATGTTATGTGACTCTTGCTTGTGCCCTAAACACATAGGCCATTGTAACATTGCTGAGTGCAACACCCAGGTGATGTAACGCTTCACCCTGGACCTGTCTACAGAGGGCATTGTAATATATGTCTTCACCAATCACCCAGGAAATGTGACTTTTTATTCCTCCCTGTTCTGTACTCACAGGGGGTATTGGGACATATTGGGCCCAGCACCTAGCTGATGTGACTTTTCTTTATTCTAGGTTCTGACAACAAAGGAGATTGTGACATATTGCTGGGCCTAACACTAAGGTGATGTTAGTTATTTGCTTTGGCTGTGCCCTTGGAAGGCATTGAGACATACTGCTGTGCCCAGCACCAAGATGATGTAACGTGACTCTTCTGCTTCAGGCCTGCCAAAAGAAAAGATTGTGACAGATCACTGGACCCAGCACCTAGGTGATATGACTCTCCTCATTTGCCTGAGACCTGCATATTTTAGACATTGTGATATACAACTGGAACAAACACCTAGGGGTTGGAAGGCTCCTGCCTGAG</dnaseq>| | sequence = <dnaseq>TAATTTTTTGTATTTTTAGTAGAGAAGGATTCCTCCATGTTGGTCAGGCTGGTCTCAAACTTCTGACCTCAGGTGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATCAGCCACTGTGCCCGGCGACTCTTTTCTTACGTGGGCTTTGCTAATAGTAGAGATTGTGACCTATCTCTGGGCCCAGCACCTAGATATTATGACTGTCCTACCCTGCCTGGTCCATGCCCACAGAAAAGAGTGACTTATCACTAGGCTTAACACACAAGTGATTCGATTCTTCTGCATGATCCCAGCCCACATGGCTTATTGTGACATATCTAGACCCATCACCTAGATGATGTAACTCTCCTTTTCTTTCTGGGAACTGTCCATAATGAGGATTGTGACACATCACTTGGCCCAGCACTTATGTGATATGACTCTCTTCTTTTGCCTGGGCTTATCAAATTGGGTGATTATGTCATATAGCTGTACTCAGCTCCTAGGTTATGTGTCTCTCCTGTTTCTCCTGAGTCCAACCCACAGAGGTCATTGCAACATATCTCTGAGCCCCTAATTTACGTAGTTTGACTCCTGCCTGGGCCCTCCCTTCAGTGATTTTTGTGACATATTTTTTGACTCAGCACCTAGGTAATGTGACTCTTCTCCACTGCTTGGACTCTGTCACAGAAGGTATTGTGATGTATCACTGGGCCTGACACCTAGGTGAAGGTACTGTCTTCTCCTGCCTGGGCCCTGCATAAATTGTATATTTTGACATGTCACTGGGTTCAACACATGGGTGATTCAACTCTCTCACATGGACCTTGAGCATGGGGTTATTAGGACATTTATTTTTGTTCATCTCAGTGATATGACTCCTTTCCTCCCTGAACCCTGTCAAAAAGAAAGATTGTGACATATCACTTAAACCAGAACTTAGGTGATGAGACTCTTCTGTCTAGCAACCACTTATTTTGGGTATTGTGACATTTCACTGGGCCAAACACCTAAAAAATGGGAGGCTCCTGCCTCAGCCCTGTCCACATATATCTGGACATATATCTGCATCCATTACATAAAACATGTGATACCTTTTCTGCCTGTACCCTGCCCACAGGAAAGATTGTGACACTGCAGGGCCTGGCCGCCAGCTGTTGTGTCTCACCTGAATGTACATAACTTTCAGGAGAAAGTTGTAACATGTCACTGGTTGAAAACCCAGATGATGTGACTCTCCTGGCTTTTCACAGCCCTCAGGGAAAAAATTTACATATCAGTGGCCCAGCATCCAGGTGATGCGACTCTCCTGGGTGCTTTCTGCCAACAAGTTGATTGGTAACATATATCTCATCCCAGCTCACAGGTTTGATGATGACTCTAATACTTCATACCAGTCAATAGAAGAGATAGTGTCTCTCACAGCTAGGCTTAGAAAAAGGAGTAAAATCTCAGGTCTCCTCTCTGCATGAAGGTTATAGCGAATCACCACTCTCATATATTGTATAAAGCACTCAGATGATACAGAGCATGTCATCATAGGACCCAGCAAACAGGTTAGATCATGTTTCATGTAAGCGCTCCCTGACAATTTTTAGAATTGTCATCGTCACACATGGTGAAAGTCCACTGATGAGGTCATAATTCTCATGCACAGATGCAGTCCACAGTTAAAATTGTAACTATCATATGTAAACGTGGCCACAGTTGAGATGGTGACTCATTTCTAAACCCAGCTCATAGGTGAGTGAGGACTCTCCTCTCTGGACCCAGCCAATTGAAGAGATGTTGACCCATACCTAGACTTAGGACCACATAAGATCATGGGTCCAAAGCAGCGCAAAGTTCTCAGAGTAGGTTGCAACTCATACAGTCCTCAAGAGAGTGCCCTTACAGGGCCAAGCACACAGGTGAGATTGTCAAACTTACATTCACACCCAGTCAATAGCAAAGATTGTCATTTACTTAAACACACCCTACTTTTGAGGTTCTGAATCTCACTTTTGGAGGCAGTTGAATGTTGGAAAATTGACTCTCATTTGTGTGGATTTTGTCCACATTTGGGTGACTCTTTAATCAAAATTCAGCACACCTTTGTGACTGTAACTTCACTAAGGAGCTTTATTTATTTAGAGATGAAGTTTCATTCTTGTAACCCAGGCTGGAGTGCGGTGGCGTGATCTCCGCTCACTGCAACCTCTGCCTACTGGGTTCAAGCGATTCTCCTGCCTGATTCTCCCAAGTAGCTGGGATTACAGGTGCTCACTACCATGTTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGCTTTACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCGCCCACCTCGGCCTCCCAAAATGCTGAGATTACAGGTGTGAGCCACCGTGCCCAGTCTAAGGCACACAATTTGCAAAGGAAATTGAGGCTCTCGCACAAATCCAGTCCACCCTGTACTTACACCCAACATGCAGGAGGTGTTGACTCTCATCCCTTGACTCAGGACATGTGTGTAATTGTTAATGTCATCGCAAGGCCTTTTGACAAGTGTAATTGTGACATATACCTTGGCCTAGCATCTGAGTTATTTGTTGTTTCCTGGGTCCAGCTCACAGTGCCATATCACTGGATCCAGACCCTTGGTAATGTGATTCTATTCTGCCTTGATACAGCCCACAGGGGTCATTGTGACATCGCTGGGCATTGCACCTAGGTGATTTGAGTCTCCTCTTCTGCCTTGGTGCTGCCCACAGGTGTATTGTGACATATTGCTGGGCGTATGTTATGTGACTCTTGCTTGTGCCCTAAACACATAGGCCATTGTAACATTGCTGAGTGCAACACCCAGGTGATGTAACGCTTCACCCTGGACCTGTCTACAGAGGGCATTGTAATATATGTCTTCACCAATCACCCAGGAAATGTGACTTTTTATTCCTCCCTGTTCTGTACTCACAGGGGGTATTGGGACATATTGGGCCCAGCACCTAGCTGATGTGACTTTTCTTTATTCTAGGTTCTGACAACAAAGGAGATTGTGACATATTGCTGGGCCTAACACTAAGGTGATGTTAGTTATTTGCTTTGGCTGTGCCCTTGGAAGGCATTGAGACATACTGCTGTGCCCAGCACCAAGATGATGTAACGTGACTCTTCTGCTTCAGGCCTGCCAAAAGAAAAGATTGTGACAGATCACTGGACCCAGCACCTAGGTGATATGACTCTCCTCATTTGCCTGAGACCTGCATATTTTAGACATTGTGATATACAACTGGAACAAACACCTAGGGGTTGGAAGGCTCCTGCCTGAG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:lnc-AC092329.1-1]][[Category:NONHSAG025343]] | + | [[Category:Intergenic]][[Category:lnc-AC092329.1-1]][[Category:NONHSAG025343]][[Category:Transcripts]] |
Latest revision as of 03:30, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
lnc-AC092329.1-1:7 |
| Source |
LNCipedia2.1 |
| Same with |
NONHSAT063875 |
| Classification |
intergenic |
| Length |
3319 nt |
| Genomic location |
chr19-:23443567..23447570 |
| Exon number |
2 |
| Exons |
23443567..23443736,23444422..23447570 |
| Genome context |
|
| Sequence |
000001 TAATTTTTTG TATTTTTAGT AGAGAAGGAT TCCTCCATGT TGGTCAGGCT GGTCTCAAAC TTCTGACCTC AGGTGATCTG 000080
000081 CCTGCCTCGG CCTCCCAAAG TGCTGGGATT ACAGGCATCA GCCACTGTGC CCGGCGACTC TTTTCTTACG TGGGCTTTGC 000160 000161 TAATAGTAGA GATTGTGACC TATCTCTGGG CCCAGCACCT AGATATTATG ACTGTCCTAC CCTGCCTGGT CCATGCCCAC 000240 000241 AGAAAAGAGT GACTTATCAC TAGGCTTAAC ACACAAGTGA TTCGATTCTT CTGCATGATC CCAGCCCACA TGGCTTATTG 000320 000321 TGACATATCT AGACCCATCA CCTAGATGAT GTAACTCTCC TTTTCTTTCT GGGAACTGTC CATAATGAGG ATTGTGACAC 000400 000401 ATCACTTGGC CCAGCACTTA TGTGATATGA CTCTCTTCTT TTGCCTGGGC TTATCAAATT GGGTGATTAT GTCATATAGC 000480 000481 TGTACTCAGC TCCTAGGTTA TGTGTCTCTC CTGTTTCTCC TGAGTCCAAC CCACAGAGGT CATTGCAACA TATCTCTGAG 000560 000561 CCCCTAATTT ACGTAGTTTG ACTCCTGCCT GGGCCCTCCC TTCAGTGATT TTTGTGACAT ATTTTTTGAC TCAGCACCTA 000640 000641 GGTAATGTGA CTCTTCTCCA CTGCTTGGAC TCTGTCACAG AAGGTATTGT GATGTATCAC TGGGCCTGAC ACCTAGGTGA 000720 000721 AGGTACTGTC TTCTCCTGCC TGGGCCCTGC ATAAATTGTA TATTTTGACA TGTCACTGGG TTCAACACAT GGGTGATTCA 000800 000801 ACTCTCTCAC ATGGACCTTG AGCATGGGGT TATTAGGACA TTTATTTTTG TTCATCTCAG TGATATGACT CCTTTCCTCC 000880 000881 CTGAACCCTG TCAAAAAGAA AGATTGTGAC ATATCACTTA AACCAGAACT TAGGTGATGA GACTCTTCTG TCTAGCAACC 000960 000961 ACTTATTTTG GGTATTGTGA CATTTCACTG GGCCAAACAC CTAAAAAATG GGAGGCTCCT GCCTCAGCCC TGTCCACATA 001040 001041 TATCTGGACA TATATCTGCA TCCATTACAT AAAACATGTG ATACCTTTTC TGCCTGTACC CTGCCCACAG GAAAGATTGT 001120 001121 GACACTGCAG GGCCTGGCCG CCAGCTGTTG TGTCTCACCT GAATGTACAT AACTTTCAGG AGAAAGTTGT AACATGTCAC 001200 001201 TGGTTGAAAA CCCAGATGAT GTGACTCTCC TGGCTTTTCA CAGCCCTCAG GGAAAAAATT TACATATCAG TGGCCCAGCA 001280 001281 TCCAGGTGAT GCGACTCTCC TGGGTGCTTT CTGCCAACAA GTTGATTGGT AACATATATC TCATCCCAGC TCACAGGTTT 001360 001361 GATGATGACT CTAATACTTC ATACCAGTCA ATAGAAGAGA TAGTGTCTCT CACAGCTAGG CTTAGAAAAA GGAGTAAAAT 001440 001441 CTCAGGTCTC CTCTCTGCAT GAAGGTTATA GCGAATCACC ACTCTCATAT ATTGTATAAA GCACTCAGAT GATACAGAGC 001520 001521 ATGTCATCAT AGGACCCAGC AAACAGGTTA GATCATGTTT CATGTAAGCG CTCCCTGACA ATTTTTAGAA TTGTCATCGT 001600 001601 CACACATGGT GAAAGTCCAC TGATGAGGTC ATAATTCTCA TGCACAGATG CAGTCCACAG TTAAAATTGT AACTATCATA 001680 001681 TGTAAACGTG GCCACAGTTG AGATGGTGAC TCATTTCTAA ACCCAGCTCA TAGGTGAGTG AGGACTCTCC TCTCTGGACC 001760 001761 CAGCCAATTG AAGAGATGTT GACCCATACC TAGACTTAGG ACCACATAAG ATCATGGGTC CAAAGCAGCG CAAAGTTCTC 001840 001841 AGAGTAGGTT GCAACTCATA CAGTCCTCAA GAGAGTGCCC TTACAGGGCC AAGCACACAG GTGAGATTGT CAAACTTACA 001920 001921 TTCACACCCA GTCAATAGCA AAGATTGTCA TTTACTTAAA CACACCCTAC TTTTGAGGTT CTGAATCTCA CTTTTGGAGG 002000 002001 CAGTTGAATG TTGGAAAATT GACTCTCATT TGTGTGGATT TTGTCCACAT TTGGGTGACT CTTTAATCAA AATTCAGCAC 002080 002081 ACCTTTGTGA CTGTAACTTC ACTAAGGAGC TTTATTTATT TAGAGATGAA GTTTCATTCT TGTAACCCAG GCTGGAGTGC 002160 002161 GGTGGCGTGA TCTCCGCTCA CTGCAACCTC TGCCTACTGG GTTCAAGCGA TTCTCCTGCC TGATTCTCCC AAGTAGCTGG 002240 002241 GATTACAGGT GCTCACTACC ATGTTGGCTA ATTTTTTGTA TTTTTAGTAG AGATGGGGCT TTACCATGTT GGTCAGGCTG 002320 002321 GTCTTGAACT CCTGACCTCA AGTGATCCGC CCACCTCGGC CTCCCAAAAT GCTGAGATTA CAGGTGTGAG CCACCGTGCC 002400 002401 CAGTCTAAGG CACACAATTT GCAAAGGAAA TTGAGGCTCT CGCACAAATC CAGTCCACCC TGTACTTACA CCCAACATGC 002480 002481 AGGAGGTGTT GACTCTCATC CCTTGACTCA GGACATGTGT GTAATTGTTA ATGTCATCGC AAGGCCTTTT GACAAGTGTA 002560 002561 ATTGTGACAT ATACCTTGGC CTAGCATCTG AGTTATTTGT TGTTTCCTGG GTCCAGCTCA CAGTGCCATA TCACTGGATC 002640 002641 CAGACCCTTG GTAATGTGAT TCTATTCTGC CTTGATACAG CCCACAGGGG TCATTGTGAC ATCGCTGGGC ATTGCACCTA 002720 002721 GGTGATTTGA GTCTCCTCTT CTGCCTTGGT GCTGCCCACA GGTGTATTGT GACATATTGC TGGGCGTATG TTATGTGACT 002800 002801 CTTGCTTGTG CCCTAAACAC ATAGGCCATT GTAACATTGC TGAGTGCAAC ACCCAGGTGA TGTAACGCTT CACCCTGGAC 002880 002881 CTGTCTACAG AGGGCATTGT AATATATGTC TTCACCAATC ACCCAGGAAA TGTGACTTTT TATTCCTCCC TGTTCTGTAC 002960 002961 TCACAGGGGG TATTGGGACA TATTGGGCCC AGCACCTAGC TGATGTGACT TTTCTTTATT CTAGGTTCTG ACAACAAAGG 003040 003041 AGATTGTGAC ATATTGCTGG GCCTAACACT AAGGTGATGT TAGTTATTTG CTTTGGCTGT GCCCTTGGAA GGCATTGAGA 003120 003121 CATACTGCTG TGCCCAGCAC CAAGATGATG TAACGTGACT CTTCTGCTTC AGGCCTGCCA AAAGAAAAGA TTGTGACAGA 003200 003201 TCACTGGACC CAGCACCTAG GTGATATGAC TCTCCTCATT TGCCTGAGAC CTGCATATTT TAGACATTGT GATATACAAC 003280 003281 TGGAACAAAC ACCTAGGGGT TGGAAGGCTC CTGCCTGAG |
