Difference between revisions of "NONHSAT069094"
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sequence = <dnaseq>ggcaggagaattgcttgaacccaggaggcagaggttgcagtgagctgagatcatgctattgcactccagcctggatgacagagtagtactttgtctcaaaaaaaaaaaaaaaatttgagatgaagtctcactctgttgcccaggctggactgcagtggcatgatcgcggctcactgcaacctctgcctcccaggttcaaggattctcctgcctcagcctcctgagtagctaggactacaggcatgcgctaccaagcccagc</dnaseq>| | sequence = <dnaseq>ggcaggagaattgcttgaacccaggaggcagaggttgcagtgagctgagatcatgctattgcactccagcctggatgacagagtagtactttgtctcaaaaaaaaaaaaaaaatttgagatgaagtctcactctgttgcccaggctggactgcagtggcatgatcgcggctcactgcaacctctgcctcccaggttcaaggattctcctgcctcagcctcctgagtagctaggactacaggcatgcgctaccaagcccagc</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:NONHSAG026980]] | + | [[Category:Intergenic]][[Category:NONHSAG026980]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 23:11, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT069094 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
261 nt |
| Genomic location |
chr2+:10420757..10421017 |
| Exon number |
1 |
| Exons |
10420757..10421017 |
| Genome context |
|
| Sequence |
000001 ggcaggagaa ttgcttgaac ccaggaggca gaggttgcag tgagctgaga tcatgctatt gcactccagc ctggatgaca 000080
000081 gagtagtact ttgtctcaaa aaaaaaaaaa aaatttgaga tgaagtctca ctctgttgcc caggctggac tgcagtggca 000160 000161 tgatcgcggc tcactgcaac ctctgcctcc caggttcaag gattctcctg cctcagcctc ctgagtagct aggactacag 000240 000241 gcatgcgcta ccaagcccag c |
Predicted Small Protein
| Name | NONHSAT069094_smProtein_119:223 |
| Length | 35 |
| Molecular weight | 3688.0946 |
| Aromaticity | 0.0588235294118 |
| Instability index | 65.7411764706 |
| Isoelectric point | 9.98443603516 |
| Runs | 5 |
| Runs residual | 0.0390915860015 |
| Runs probability | 0.0111641052818 |
| Amino acid sequence | MKSHSVAQAGLQWHDRGSLQPLPPRFKDSPASAS |
| Secondary structure | LLLHHHHHHLLEEELLLLLLLLLLLLLLLLLLLL |
| PRMN | - |
| PiMo | - |
