Difference between revisions of "NONHSAT069575"

From LncRNAWiki
Jump to: navigation, search
 
(One intermediate revision by one other user not shown)
Line 42: Line 42:
 
sequence = <dnaseq>ACCCACCCGCAACCGCGTCCGTTGACGGTCGGGTCCTTGGTCGCCGGGTCCTTGCGGGCACCACAGAGCGGGGTGGCGTCCGCTCCCTCGAGTCCTCGGTGCCAGGGAATTCACCGCTCACCACCCCCTGCCCCGCCTTGGGTCCTGCTCGGGGACCAAACCACTGGAAGGCAGTGGCGGGAAACGGGCGCCTGTGCCGGAGGTAACGCCCAGTGATGTCCGAACACTGGTGAATGGATTTGCCAAGAACCCTTTGCAAGCCCGAAGAGAAGGACTGTATTTCAAGGGAAAAGATTACAGATGTGTCCGGGCAGATGAATATTCTCTTTATGCCAAAAATGAGAACACTGGTGTGGTTGTCGTGAAGACCCATCTGTATCTTCTGGTAGCAACTTACACTGAGGGCATGTATCCTAGCATCTGTGTGGAAGCCACAGAGAGCCTGGGAGACTACCTAAGAAAAAAAGGAAGTTAAGTCATCAGAGGCCCATGAAAGACAATTTTATTATTTTAGAAGAAAATTGAAGAGCCTAAAGAAAAAATATTTTATGGTTGAAAAAACACTAGACAGAAGGCACTAAAAAAGAAGAATGAATTAAGGGAGCAATTTTTATTACTTCCAGAGATCCTCTTCTTTCACTGGAATTACTTGATCAACTGT</dnaseq>|
 
sequence = <dnaseq>ACCCACCCGCAACCGCGTCCGTTGACGGTCGGGTCCTTGGTCGCCGGGTCCTTGCGGGCACCACAGAGCGGGGTGGCGTCCGCTCCCTCGAGTCCTCGGTGCCAGGGAATTCACCGCTCACCACCCCCTGCCCCGCCTTGGGTCCTGCTCGGGGACCAAACCACTGGAAGGCAGTGGCGGGAAACGGGCGCCTGTGCCGGAGGTAACGCCCAGTGATGTCCGAACACTGGTGAATGGATTTGCCAAGAACCCTTTGCAAGCCCGAAGAGAAGGACTGTATTTCAAGGGAAAAGATTACAGATGTGTCCGGGCAGATGAATATTCTCTTTATGCCAAAAATGAGAACACTGGTGTGGTTGTCGTGAAGACCCATCTGTATCTTCTGGTAGCAACTTACACTGAGGGCATGTATCCTAGCATCTGTGTGGAAGCCACAGAGAGCCTGGGAGACTACCTAAGAAAAAAAGGAAGTTAAGTCATCAGAGGCCCATGAAAGACAATTTTATTATTTTAGAAGAAAATTGAAGAGCCTAAAGAAAAAATATTTTATGGTTGAAAAAACACTAGACAGAAGGCACTAAAAAAGAAGAATGAATTAAGGGAGCAATTTTTATTACTTCCAGAGATCCTCTTCTTTCACTGGAATTACTTGATCAACTGT</dnaseq>|
 
}}
 
}}
[[Category:Sense]][[Category:NONHSAG027229]]
+
[[Category:Sense]][[Category:NONHSAG027229]][[Category:Transcripts]][[Category:Transcripts]]

Latest revision as of 23:13, 16 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT069575

Source

NONCODE4.0

Same with

,

Classification

sense

Length

661 nt

Genomic location

chr2-:24338267..24346189

Exon number

4

Exons

24338267..24338481,24342447..24342552,24344033..24344170,24345988..24346189

Genome context

Sequence
000001 ACCCACCCGC AACCGCGTCC GTTGACGGTC GGGTCCTTGG TCGCCGGGTC CTTGCGGGCA CCACAGAGCG GGGTGGCGTC 000080
000081 CGCTCCCTCG AGTCCTCGGT GCCAGGGAAT TCACCGCTCA CCACCCCCTG CCCCGCCTTG GGTCCTGCTC GGGGACCAAA 000160
000161 CCACTGGAAG GCAGTGGCGG GAAACGGGCG CCTGTGCCGG AGGTAACGCC CAGTGATGTC CGAACACTGG TGAATGGATT 000240
000241 TGCCAAGAAC CCTTTGCAAG CCCGAAGAGA AGGACTGTAT TTCAAGGGAA AAGATTACAG ATGTGTCCGG GCAGATGAAT 000320
000321 ATTCTCTTTA TGCCAAAAAT GAGAACACTG GTGTGGTTGT CGTGAAGACC CATCTGTATC TTCTGGTAGC AACTTACACT 000400
000401 GAGGGCATGT ATCCTAGCAT CTGTGTGGAA GCCACAGAGA GCCTGGGAGA CTACCTAAGA AAAAAAGGAA GTTAAGTCAT 000480
000481 CAGAGGCCCA TGAAAGACAA TTTTATTATT TTAGAAGAAA ATTGAAGAGC CTAAAGAAAA AATATTTTAT GGTTGAAAAA 000560
000561 ACACTAGACA GAAGGCACTA AAAAAGAAGA ATGAATTAAG GGAGCAATTT TTATTACTTC CAGAGATCCT CTTCTTTCAC 000640
000641 TGGAATTACT TGATCAACTG T
[back to top]

Predicted Small Protein

Name NONHSAT069575_smProtein_233:364
Length 44
Molecular weight 5055.0144
Aromaticity 0.046511627907
Instability index 58.4813953488
Isoelectric point 7.79107666016
Runs 8
Runs residual 0.0287431408414
Runs probability 0.0293344815404
Amino acid sequence MDLPRTLCKPEEKDCISREKITDVSGQMNILFMPKMRTLVWLS
Secondary structure LLLLLLLLLLLLLLLLLHHHHEELLLLEEEEEELLLLEEEEEL
PRMN -
PiMo -