Difference between revisions of "NONHSAT093721"
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sequence = <dnaseq>attttacagaagggggaactgaggctcagtaggataatgtgatttgttcaaggtcacacagctagtaagtggtgcagccaggattggaacccaagcatctggctccagcgttctttcttaaGCTTCCTAGGGCACCCTGGAGGTTCCTTTCCATGTTCCTTTTTCATAAGCCCTGCCTGGGCATCCTAATTGGCCTAGCCTGCACAGTGTCTGAGCGTAGGGCCTTCTTGTCTCTCTGCTCCAGGTCTGTGGGGTGTGGCGGGCAGTGCCTCGGTTGTCTCTGCGGCTCCTTAGGGCAGAACAGCTGCATGTGGCACTTGTGACACTCACTCACCCTTCAGGGGAGGTCTGGGGGCCTCTCATCCGGCACCGGGCCCTGGCTGCAGAGACCTTCAGTGCCATCCTGACTCTAGAAGGCCCCCCACAGCAGGGCGTAGGGGGCATCACCCTGCTCACTCTCAGTGACACAGAGGACTCCTTGCATTTTTTGCTGCTCTTCCGAGGGCTGCTGGAACCCAGGAGTGGGGGTAAGTGGGATGGGGGCAAAACACGTGAGAAGGTTAGGGAGAGCACCTGTCTCAGAAAGGCCCACATGTGCGGCCTTGCAGGACTAACCCAGGTTCCCTTGAGGCTCCAGATTCTACACCAGGGGCAGCTACTGCGAGAACTTCAGGCCAATGTCT</dnaseq>| | sequence = <dnaseq>attttacagaagggggaactgaggctcagtaggataatgtgatttgttcaaggtcacacagctagtaagtggtgcagccaggattggaacccaagcatctggctccagcgttctttcttaaGCTTCCTAGGGCACCCTGGAGGTTCCTTTCCATGTTCCTTTTTCATAAGCCCTGCCTGGGCATCCTAATTGGCCTAGCCTGCACAGTGTCTGAGCGTAGGGCCTTCTTGTCTCTCTGCTCCAGGTCTGTGGGGTGTGGCGGGCAGTGCCTCGGTTGTCTCTGCGGCTCCTTAGGGCAGAACAGCTGCATGTGGCACTTGTGACACTCACTCACCCTTCAGGGGAGGTCTGGGGGCCTCTCATCCGGCACCGGGCCCTGGCTGCAGAGACCTTCAGTGCCATCCTGACTCTAGAAGGCCCCCCACAGCAGGGCGTAGGGGGCATCACCCTGCTCACTCTCAGTGACACAGAGGACTCCTTGCATTTTTTGCTGCTCTTCCGAGGGCTGCTGGAACCCAGGAGTGGGGGTAAGTGGGATGGGGGCAAAACACGTGAGAAGGTTAGGGAGAGCACCTGTCTCAGAAAGGCCCACATGTGCGGCCTTGCAGGACTAACCCAGGTTCCCTTGAGGCTCCAGATTCTACACCAGGGGCAGCTACTGCGAGAACTTCAGGCCAATGTCT</dnaseq>| | ||
}} | }} | ||
− | [[Category:Sense]][[Category:NONHSAG036861]] | + | [[Category:Sense]][[Category:NONHSAG036861]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 00:48, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT093721 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
683 nt |
Genomic location |
chr3+:184099933..184100718 |
Exon number |
2 |
Exons |
184099933..184100318,184100422..184100718 |
Genome context |
|
Sequence |
000001 attttacaga agggggaact gaggctcagt aggataatgt gatttgttca aggtcacaca gctagtaagt ggtgcagcca 000080
000081 ggattggaac ccaagcatct ggctccagcg ttctttctta aGCTTCCTAG GGCACCCTGG AGGTTCCTTT CCATGTTCCT 000160 000161 TTTTCATAAG CCCTGCCTGG GCATCCTAAT TGGCCTAGCC TGCACAGTGT CTGAGCGTAG GGCCTTCTTG TCTCTCTGCT 000240 000241 CCAGGTCTGT GGGGTGTGGC GGGCAGTGCC TCGGTTGTCT CTGCGGCTCC TTAGGGCAGA ACAGCTGCAT GTGGCACTTG 000320 000321 TGACACTCAC TCACCCTTCA GGGGAGGTCT GGGGGCCTCT CATCCGGCAC CGGGCCCTGG CTGCAGAGAC CTTCAGTGCC 000400 000401 ATCCTGACTC TAGAAGGCCC CCCACAGCAG GGCGTAGGGG GCATCACCCT GCTCACTCTC AGTGACACAG AGGACTCCTT 000480 000481 GCATTTTTTG CTGCTCTTCC GAGGGCTGCT GGAACCCAGG AGTGGGGGTA AGTGGGATGG GGGCAAAACA CGTGAGAAGG 000560 000561 TTAGGGAGAG CACCTGTCTC AGAAAGGCCC ACATGTGCGG CCTTGCAGGA CTAACCCAGG TTCCCTTGAG GCTCCAGATT 000640 000641 CTACACCAGG GGCAGCTACT GCGAGAACTT CAGGCCAATG TCT |
Predicted Small Protein
Name | NONHSAT093721_smProtein_152:322 |
Length | 57 |
Molecular weight | 5979.1671 |
Aromaticity | 0.0714285714286 |
Instability index | 77.4321428571 |
Isoelectric point | 8.52337646484 |
Runs | 10 |
Runs residual | 0.0252732240437 |
Runs probability | 0.0482600247306 |
Amino acid sequence | MFLFHKPCLGILIGLACTVSERRAFLSLCSRSVGCGGQCLGCLCGSLGQNSCMWHL |
Secondary structure | LEEEELLLHHHEEELLLLLHHHHHHHHHHLLLLLLLLHHHHHHHLLLLLLLLLLLL |
PRMN | - |
PiMo | - |