Difference between revisions of "ENST00000517509.1"
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sequence = <dnaseq>GAGGCGGAGACACAAGGCTCCGTTCCACTGGGCACGCCAGCGGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGAGCTCAGGCGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACGGGCGTGAGCCACTGCACCCGGTTCAAGCGATTCTCCTGCCTCAGCCCCCTGAGTAGCTGGGATTACAGGCACGCGCCACCACTCCCAGATCTTCACTTCAGGTCAGCTCCAAGGAGGCTATCCTTGCCCATCTTCCTAAAATAGAGCTCTCAAAACCTGGCTGTTTTCCTTCAGAGCACTGGCCTCCAATTGCTCCGGTAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGCGTTTGGACCCCTGTCTTGGACCGCTGTCGGATAGTAAATCCCAAGTAAGGTACCTGCCGTCGGCAGATTTGAGCTTTCTTCTTGGACACCTAATACCCAGAGTCCTCCAGGCTCCGGTAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGCGGCATCGGACCCGTCGGAGAGTAAATCCCAAGTAAGGTACCTGCCGTTGGCAGATTTGAGCTTTCTTCTTGGACACCTAATACCCACAGTCCTCCAGGCTCCGGTAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGTGGCATCGACCCGTCGGAGAGTAAATCCCAAGTAAGGTACCTGCCGTTGGCAGATTTGAGCTTTCTTCTTGGACACCTAATACCCACAGTCCTCCAGTAAATCCCAAGCAAGGTACCTGCCGTCAGCAGATTTGAGCTTTCTTCTTGGACACCTAATACCCACAGTCCTCCAGGCTCCGGTAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGCTGCGTTCGGACCCCTGTCGGATAGTAACTCCCAAGTAAGGTACCTGCCGTCGGCAGATTGGAGCTTTCTTCTTGGAGACCTAATACCCACAGTCCTCCAGAAAAACAAACAAAGACATGGATTTACTGTGCATATTAGCAGATCCATACTGGAAAATGCATGGAGGTTTCATATACACCACTTACAGTTTTCAGCTCCTCAGTAGTGACAAAGCCATACCCATCATTGTCGATTCGATCAACAATCTTCCCTAGCCTCTCCTTGCTCTCGTCCGGGGTGAGCTCGTCGAAGTTCTTGGAGTCCTCCTTGCCCAGGAAGGCCTCGTGGTCGTACTGGAAGCTCTGGTTGTCCTCAGGGGGCCGCTCGCCCAGCTCCGAGTCGGGCCGCACCACGCGCTCTTTGCGCACCGTGGGCTTGGCCCGCAGAACCCGCGGCGCCAGCACCAGCGCCAGCAGCAGCCCCAGGGCTAACCCCAGGCGGCCACCGCGCGCCATCGTCCCGAGGAGAGGGCGGCCGGGAGGGAGACGCTGAGCGAGCGACAACAGCGGCAGCTCGGGAATGGGGGCTCGGAGCGCGGCGGCCAAGTTTTATGTTATGTATATTTTACAAGTAAAAAAATTTTTTCACCTCAGCCTGAA</dnaseq>| | sequence = <dnaseq>GAGGCGGAGACACAAGGCTCCGTTCCACTGGGCACGCCAGCGGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGAGCTCAGGCGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACGGGCGTGAGCCACTGCACCCGGTTCAAGCGATTCTCCTGCCTCAGCCCCCTGAGTAGCTGGGATTACAGGCACGCGCCACCACTCCCAGATCTTCACTTCAGGTCAGCTCCAAGGAGGCTATCCTTGCCCATCTTCCTAAAATAGAGCTCTCAAAACCTGGCTGTTTTCCTTCAGAGCACTGGCCTCCAATTGCTCCGGTAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGCGTTTGGACCCCTGTCTTGGACCGCTGTCGGATAGTAAATCCCAAGTAAGGTACCTGCCGTCGGCAGATTTGAGCTTTCTTCTTGGACACCTAATACCCAGAGTCCTCCAGGCTCCGGTAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGCGGCATCGGACCCGTCGGAGAGTAAATCCCAAGTAAGGTACCTGCCGTTGGCAGATTTGAGCTTTCTTCTTGGACACCTAATACCCACAGTCCTCCAGGCTCCGGTAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGTGGCATCGACCCGTCGGAGAGTAAATCCCAAGTAAGGTACCTGCCGTTGGCAGATTTGAGCTTTCTTCTTGGACACCTAATACCCACAGTCCTCCAGTAAATCCCAAGCAAGGTACCTGCCGTCAGCAGATTTGAGCTTTCTTCTTGGACACCTAATACCCACAGTCCTCCAGGCTCCGGTAGATTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGCTGCGTTCGGACCCCTGTCGGATAGTAACTCCCAAGTAAGGTACCTGCCGTCGGCAGATTGGAGCTTTCTTCTTGGAGACCTAATACCCACAGTCCTCCAGAAAAACAAACAAAGACATGGATTTACTGTGCATATTAGCAGATCCATACTGGAAAATGCATGGAGGTTTCATATACACCACTTACAGTTTTCAGCTCCTCAGTAGTGACAAAGCCATACCCATCATTGTCGATTCGATCAACAATCTTCCCTAGCCTCTCCTTGCTCTCGTCCGGGGTGAGCTCGTCGAAGTTCTTGGAGTCCTCCTTGCCCAGGAAGGCCTCGTGGTCGTACTGGAAGCTCTGGTTGTCCTCAGGGGGCCGCTCGCCCAGCTCCGAGTCGGGCCGCACCACGCGCTCTTTGCGCACCGTGGGCTTGGCCCGCAGAACCCGCGGCGCCAGCACCAGCGCCAGCAGCAGCCCCAGGGCTAACCCCAGGCGGCCACCGCGCGCCATCGTCCCGAGGAGAGGGCGGCCGGGAGGGAGACGCTGAGCGAGCGACAACAGCGGCAGCTCGGGAATGGGGGCTCGGAGCGCGGCGGCCAAGTTTTATGTTATGTATATTTTACAAGTAAAAAAATTTTTTCACCTCAGCCTGAA</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:ENSG00000170919.11]][[Category:lnc-GTF2F2-2]] | + | [[Category:Intergenic]][[Category:ENSG00000170919.11]][[Category:lnc-GTF2F2-2]][[Category:Transcripts]] |
Latest revision as of 16:53, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000517509.1 |
Source |
Gencode19 |
Same with |
lnc-GTF2F2-2:1 |
Classification |
intergenic |
Length |
1526 nt |
Genomic location |
chr13+:45915480..45965618 |
Exon number |
11 |
Exons |
45915480..45915522,45917561..45917675,45918514..45918581,45944215..45944317,45951196..45951350,45952665..45952806,45953330..45953470,45954061..45954136,45957226..45957370,45963870..45963955,45965167..45965618 |
Genome context |
|
Sequence |
000001 GAGGCGGAGA CACAAGGCTC CGTTCCACTG GGCACGCCAG CGGTAGAGAC AGGGTTTCAC CATGTTGGCC AGGCTGGTCT 000080
000081 CAAACTCCTG AGCTCAGGCG ATCTGCCCGC CTCGGCCTCC CAAAGTGCTG GGATTACGGG CGTGAGCCAC TGCACCCGGT 000160 000161 TCAAGCGATT CTCCTGCCTC AGCCCCCTGA GTAGCTGGGA TTACAGGCAC GCGCCACCAC TCCCAGATCT TCACTTCAGG 000240 000241 TCAGCTCCAA GGAGGCTATC CTTGCCCATC TTCCTAAAAT AGAGCTCTCA AAACCTGGCT GTTTTCCTTC AGAGCACTGG 000320 000321 CCTCCAATTG CTCCGGTAGA TTGCAAATGA CCTGCTTTCT TTCTGTTCCC GGGCGTTTGG ACCCCTGTCT TGGACCGCTG 000400 000401 TCGGATAGTA AATCCCAAGT AAGGTACCTG CCGTCGGCAG ATTTGAGCTT TCTTCTTGGA CACCTAATAC CCAGAGTCCT 000480 000481 CCAGGCTCCG GTAGATTGCA AATGACCTGC TTTCTTTCTG TTCCCGGGCG GCATCGGACC CGTCGGAGAG TAAATCCCAA 000560 000561 GTAAGGTACC TGCCGTTGGC AGATTTGAGC TTTCTTCTTG GACACCTAAT ACCCACAGTC CTCCAGGCTC CGGTAGATTG 000640 000641 CAAATGACCT GCTTTCTTTC TGTTCCCGGG TGGCATCGAC CCGTCGGAGA GTAAATCCCA AGTAAGGTAC CTGCCGTTGG 000720 000721 CAGATTTGAG CTTTCTTCTT GGACACCTAA TACCCACAGT CCTCCAGTAA ATCCCAAGCA AGGTACCTGC CGTCAGCAGA 000800 000801 TTTGAGCTTT CTTCTTGGAC ACCTAATACC CACAGTCCTC CAGGCTCCGG TAGATTGCAA ATGACCTGCT TTCTTTCTGT 000880 000881 TCCCGGGCTG CGTTCGGACC CCTGTCGGAT AGTAACTCCC AAGTAAGGTA CCTGCCGTCG GCAGATTGGA GCTTTCTTCT 000960 000961 TGGAGACCTA ATACCCACAG TCCTCCAGAA AAACAAACAA AGACATGGAT TTACTGTGCA TATTAGCAGA TCCATACTGG 001040 001041 AAAATGCATG GAGGTTTCAT ATACACCACT TACAGTTTTC AGCTCCTCAG TAGTGACAAA GCCATACCCA TCATTGTCGA 001120 001121 TTCGATCAAC AATCTTCCCT AGCCTCTCCT TGCTCTCGTC CGGGGTGAGC TCGTCGAAGT TCTTGGAGTC CTCCTTGCCC 001200 001201 AGGAAGGCCT CGTGGTCGTA CTGGAAGCTC TGGTTGTCCT CAGGGGGCCG CTCGCCCAGC TCCGAGTCGG GCCGCACCAC 001280 001281 GCGCTCTTTG CGCACCGTGG GCTTGGCCCG CAGAACCCGC GGCGCCAGCA CCAGCGCCAG CAGCAGCCCC AGGGCTAACC 001360 001361 CCAGGCGGCC ACCGCGCGCC ATCGTCCCGA GGAGAGGGCG GCCGGGAGGG AGACGCTGAG CGAGCGACAA CAGCGGCAGC 001440 001441 TCGGGAATGG GGGCTCGGAG CGCGGCGGCC AAGTTTTATG TTATGTATAT TTTACAAGTA AAAAAATTTT TTCACCTCAG 001520 001521 CCTGAA |