Difference between revisions of "Lnc-NDUFS6-5:3"

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sequence = <dnaseq>CGGGCCTCTCCCTCCGCCGTGGCCTGGTCTGCCTGCTCCAGGGCGCAGCTGCGCCCGCTTCAGCGCCTCCCGGGTCTGCGTGGCCTGCTCGGCTCAGAGGCCTCCACCACGGTCCGCTCCCTGCCGGACGCCGCGCTGCTGTGGCCGCGGTGGTTCTGTGGCTGTGAGGGCCGTTTCTGTCCGTCCACACCGCCTTCCCTCTGCAGATTTCCTCTGCAGAGGCCCGGAGTTACCAGCAAGGTCTGACGCAGCAGAGTGCAGAAACGGCCTCCCTGTCTGTCAAAGTGGCCTCCCGAGGACACCCAGCGAGGCCACCAGATCATCACGTGGAGTATCGGTGGCCTTATTAAAACAAAAACAACAACTCCACAGCCCGGCGAGCGGTGGACGGCATCCAGACGCGGAGGGAAGTTTCCTCCTGGGGAGCAGCGCACGTGCTGCCTGGAGACAGAAGCGAAGATCAGATTGCACGTGCGTGGAATGTGGCCGCAGCACCAGTTCTGAGCTCCACGATTTGCCGGAGCATGACTCTGTTCTTCATGAAAATTATTATAAAGAGTGCTTCCAGGAGGCTGAGGCAGGAGAATCGTTTGAACCCGGGAGGCAGAGGTTGCAGTGAGTGGAGATTGCGCCACTGCACTCCCAGCCTGGGCAACAGAGAGAGACTCCGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGTGCTTCCACATTAAATCAAGAAAGACACACACACAAGTGAACTGGAAGAGTATCACACCCTCTTAGGCCTCAATGTCCACAACATCACTGGCCACAGCTTTTAGTTTCAGGAGGTGAGATATGAAAACAAACCTAATGGGCAAAGCAGATCTAAACAGGGTAAGACCTGGAGCCCCGGCCCCATGCAGCCTGCAGAAGGTGAGTGAGGTCGGCCTCCCCTCATTCCACAGTTGCCTCTTTCCAGAGACCCTGGGTGTCTGGAGGGATATAGAGTGATGTGGCCAGGCGCTGTGCCCGGGGAAATGACATTAAAATTAGTAATAGTAGGGGAAAAAAAAGAAATACTTTCCTTTACAGACAACAGAATGCAACTTGAGGCAAACCATTCTATACATACAGTCTCAGAAACGATTCCAGATTTCCGACCTGCGTGTTTTGTTTCTTTGTTTGTTTATGTCAAGACTTTACAATTTGCCATGAATCAAAAACACACATGAGCTCAGGGGATAGAAAGAAATATTCAGAAAGAGTCTGAGTGGAATTTGGATTAGGATGGGTGTTTTTTGGC</dnaseq>|
 
sequence = <dnaseq>CGGGCCTCTCCCTCCGCCGTGGCCTGGTCTGCCTGCTCCAGGGCGCAGCTGCGCCCGCTTCAGCGCCTCCCGGGTCTGCGTGGCCTGCTCGGCTCAGAGGCCTCCACCACGGTCCGCTCCCTGCCGGACGCCGCGCTGCTGTGGCCGCGGTGGTTCTGTGGCTGTGAGGGCCGTTTCTGTCCGTCCACACCGCCTTCCCTCTGCAGATTTCCTCTGCAGAGGCCCGGAGTTACCAGCAAGGTCTGACGCAGCAGAGTGCAGAAACGGCCTCCCTGTCTGTCAAAGTGGCCTCCCGAGGACACCCAGCGAGGCCACCAGATCATCACGTGGAGTATCGGTGGCCTTATTAAAACAAAAACAACAACTCCACAGCCCGGCGAGCGGTGGACGGCATCCAGACGCGGAGGGAAGTTTCCTCCTGGGGAGCAGCGCACGTGCTGCCTGGAGACAGAAGCGAAGATCAGATTGCACGTGCGTGGAATGTGGCCGCAGCACCAGTTCTGAGCTCCACGATTTGCCGGAGCATGACTCTGTTCTTCATGAAAATTATTATAAAGAGTGCTTCCAGGAGGCTGAGGCAGGAGAATCGTTTGAACCCGGGAGGCAGAGGTTGCAGTGAGTGGAGATTGCGCCACTGCACTCCCAGCCTGGGCAACAGAGAGAGACTCCGTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGTGCTTCCACATTAAATCAAGAAAGACACACACACAAGTGAACTGGAAGAGTATCACACCCTCTTAGGCCTCAATGTCCACAACATCACTGGCCACAGCTTTTAGTTTCAGGAGGTGAGATATGAAAACAAACCTAATGGGCAAAGCAGATCTAAACAGGGTAAGACCTGGAGCCCCGGCCCCATGCAGCCTGCAGAAGGTGAGTGAGGTCGGCCTCCCCTCATTCCACAGTTGCCTCTTTCCAGAGACCCTGGGTGTCTGGAGGGATATAGAGTGATGTGGCCAGGCGCTGTGCCCGGGGAAATGACATTAAAATTAGTAATAGTAGGGGAAAAAAAAGAAATACTTTCCTTTACAGACAACAGAATGCAACTTGAGGCAAACCATTCTATACATACAGTCTCAGAAACGATTCCAGATTTCCGACCTGCGTGTTTTGTTTCTTTGTTTGTTTATGTCAAGACTTTACAATTTGCCATGAATCAAAAACACACATGAGCTCAGGGGATAGAAAGAAATATTCAGAAAGAGTCTGAGTGGAATTTGGATTAGGATGGGTGTTTTTTGGC</dnaseq>|
 
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}}
[[Category:Intergenic]][[Category:lnc-NDUFS6-5]][[Category:NONHSAG039690]]
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[[Category:Intergenic]][[Category:lnc-NDUFS6-5]][[Category:NONHSAG039690]][[Category:Transcripts]]

Latest revision as of 04:46, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-NDUFS6-5:3

Source

LNCipedia2.1

Same with

NONHSAT100084

Classification

intergenic

Length

1274 nt

Genomic location

chr5+:1931298..2067530

Exon number

3

Exons

1931298..1931503,1933923..1934099,2066640..2067530

Genome context

Sequence
000001 CGGGCCTCTC CCTCCGCCGT GGCCTGGTCT GCCTGCTCCA GGGCGCAGCT GCGCCCGCTT CAGCGCCTCC CGGGTCTGCG 000080
000081 TGGCCTGCTC GGCTCAGAGG CCTCCACCAC GGTCCGCTCC CTGCCGGACG CCGCGCTGCT GTGGCCGCGG TGGTTCTGTG 000160
000161 GCTGTGAGGG CCGTTTCTGT CCGTCCACAC CGCCTTCCCT CTGCAGATTT CCTCTGCAGA GGCCCGGAGT TACCAGCAAG 000240
000241 GTCTGACGCA GCAGAGTGCA GAAACGGCCT CCCTGTCTGT CAAAGTGGCC TCCCGAGGAC ACCCAGCGAG GCCACCAGAT 000320
000321 CATCACGTGG AGTATCGGTG GCCTTATTAA AACAAAAACA ACAACTCCAC AGCCCGGCGA GCGGTGGACG GCATCCAGAC 000400
000401 GCGGAGGGAA GTTTCCTCCT GGGGAGCAGC GCACGTGCTG CCTGGAGACA GAAGCGAAGA TCAGATTGCA CGTGCGTGGA 000480
000481 ATGTGGCCGC AGCACCAGTT CTGAGCTCCA CGATTTGCCG GAGCATGACT CTGTTCTTCA TGAAAATTAT TATAAAGAGT 000560
000561 GCTTCCAGGA GGCTGAGGCA GGAGAATCGT TTGAACCCGG GAGGCAGAGG TTGCAGTGAG TGGAGATTGC GCCACTGCAC 000640
000641 TCCCAGCCTG GGCAACAGAG AGAGACTCCG TCTAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAGAGTGCT TCCACATTAA 000720
000721 ATCAAGAAAG ACACACACAC AAGTGAACTG GAAGAGTATC ACACCCTCTT AGGCCTCAAT GTCCACAACA TCACTGGCCA 000800
000801 CAGCTTTTAG TTTCAGGAGG TGAGATATGA AAACAAACCT AATGGGCAAA GCAGATCTAA ACAGGGTAAG ACCTGGAGCC 000880
000881 CCGGCCCCAT GCAGCCTGCA GAAGGTGAGT GAGGTCGGCC TCCCCTCATT CCACAGTTGC CTCTTTCCAG AGACCCTGGG 000960
000961 TGTCTGGAGG GATATAGAGT GATGTGGCCA GGCGCTGTGC CCGGGGAAAT GACATTAAAA TTAGTAATAG TAGGGGAAAA 001040
001041 AAAAGAAATA CTTTCCTTTA CAGACAACAG AATGCAACTT GAGGCAAACC ATTCTATACA TACAGTCTCA GAAACGATTC 001120
001121 CAGATTTCCG ACCTGCGTGT TTTGTTTCTT TGTTTGTTTA TGTCAAGACT TTACAATTTG CCATGAATCA AAAACACACA 001200
001201 TGAGCTCAGG GGATAGAAAG AAATATTCAG AAAGAGTCTG AGTGGAATTT GGATTAGGAT GGGTGTTTTT TGGC
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