Difference between revisions of "ENST00000399492.2"
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sequence = <dnaseq>GACAAGAGGATGGGACTGCAGTTGTGGCTGCCAGGGCCCCGGCCAGGGTGAAAACAAGGAACATTCCAGAGAAGATCACAAGGATGCGAATAAAATCGGAGCTGCACAGGGATCTTTGGGCTGTAATAGGAGGGGACACACAGGGGTTGGAGTGCAGTGGCACGATCTCGGCTCAGTGCAACCTCCGCCTCCTGAGTTCAAGTGATTCTCCTGCCTCAGCCTCCCTAGTAGCTGGGATTACAGGACAAGGAGAGGGACAAATTCCTTCTTGGCATCCTTATGGCCCTGTGACCTGCTAATGAATGCTGACTCTGAGTTGCTACTAGAATTTGGTTTCCTTGTGGCTTCCCAGGAATTGGTCTCACTCTGCTCACTCTGTCTCCCAAGCTGGAGTGCAGTGGTACAGTCACGGCTCACTGCAGCCTCCACTTCCTGGACTCAAGTGATCTTCTCACTTCAGCCTTCTGAGTAGCTGGGACTACAGCCCCCTCTGCAGCTCTTCATGGGGGTCCACTCAAGTCAGAAGCCACATTTGGGTGTGATTCAGAGAGCTGTTTATGCAAAACCAGCTTTGTCACCATCAGGCAAGGCACCTGAATTCCCACCGCAGAGAGTGTTGTGGCCGTGAGGACTTTTCTGTCACCAGCCATTTCCAGGTAGACCCAGTGTAATCACAAGCATCCTTGTAAGTGGCAAAGAGGCAGAGGAGACAGCGCCAGAGAGGCAGCTGCATGAGAAGGATCAAGATGTTGCTGACTTTGAAGTTGGAAGAAGAAGGCCATGAGCCTCAGTATGTGGGCGGCTTCTAGAAGCTGGAAGGGGCAAGGAGATGGATTTGACCCTTCAGCCTCCAGGGGCAGCTGTACCTGCCATCACTGATTGTAGCCTGGTGAGGCCTGTTTTAGACTTCTGACCTGTAGAGCTGTAACATAATACATTTGGGTTGTTTTCAACCACTAAGTTTGTGGTAATTTGTTGTAGCAGCTGTAGAAAATGAATACATATGAATCCTCTGGCATTTGTTTGAGATTTGCTCTATGGCCTAGTATGTGGTTGTAAATGTTCCATCTGTGCCTGAAAAAATGTATATTTCT</dnaseq>| | sequence = <dnaseq>GACAAGAGGATGGGACTGCAGTTGTGGCTGCCAGGGCCCCGGCCAGGGTGAAAACAAGGAACATTCCAGAGAAGATCACAAGGATGCGAATAAAATCGGAGCTGCACAGGGATCTTTGGGCTGTAATAGGAGGGGACACACAGGGGTTGGAGTGCAGTGGCACGATCTCGGCTCAGTGCAACCTCCGCCTCCTGAGTTCAAGTGATTCTCCTGCCTCAGCCTCCCTAGTAGCTGGGATTACAGGACAAGGAGAGGGACAAATTCCTTCTTGGCATCCTTATGGCCCTGTGACCTGCTAATGAATGCTGACTCTGAGTTGCTACTAGAATTTGGTTTCCTTGTGGCTTCCCAGGAATTGGTCTCACTCTGCTCACTCTGTCTCCCAAGCTGGAGTGCAGTGGTACAGTCACGGCTCACTGCAGCCTCCACTTCCTGGACTCAAGTGATCTTCTCACTTCAGCCTTCTGAGTAGCTGGGACTACAGCCCCCTCTGCAGCTCTTCATGGGGGTCCACTCAAGTCAGAAGCCACATTTGGGTGTGATTCAGAGAGCTGTTTATGCAAAACCAGCTTTGTCACCATCAGGCAAGGCACCTGAATTCCCACCGCAGAGAGTGTTGTGGCCGTGAGGACTTTTCTGTCACCAGCCATTTCCAGGTAGACCCAGTGTAATCACAAGCATCCTTGTAAGTGGCAAAGAGGCAGAGGAGACAGCGCCAGAGAGGCAGCTGCATGAGAAGGATCAAGATGTTGCTGACTTTGAAGTTGGAAGAAGAAGGCCATGAGCCTCAGTATGTGGGCGGCTTCTAGAAGCTGGAAGGGGCAAGGAGATGGATTTGACCCTTCAGCCTCCAGGGGCAGCTGTACCTGCCATCACTGATTGTAGCCTGGTGAGGCCTGTTTTAGACTTCTGACCTGTAGAGCTGTAACATAATACATTTGGGTTGTTTTCAACCACTAAGTTTGTGGTAATTTGTTGTAGCAGCTGTAGAAAATGAATACATATGAATCCTCTGGCATTTGTTTGAGATTTGCTCTATGGCCTAGTATGTGGTTGTAAATGTTCCATCTGTGCCTGAAAAAATGTATATTTCT</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:lnc-VAMP1-1]] | + | [[Category:Intergenic]][[Category:lnc-VAMP1-1]][[Category:NONHSAG010301]] |
Revision as of 13:33, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
ENST00000399492.2 |
| Source |
Gencode19 |
| Same with |
lnc-VAMP1-1:6,NONHSAT026077 |
| Classification |
intergenic |
| Length |
1094 nt |
| Genomic location |
chr12-:6548405..6560668 |
| Exon number |
7 |
| Exons |
6548405..6548842,6552712..6552883,6556127..6556253,6557203..6557316,6557806..6557903,6560036..6560146,6560635..6560668 |
| Genome context |
|
| Sequence |
000001 GACAAGAGGA TGGGACTGCA GTTGTGGCTG CCAGGGCCCC GGCCAGGGTG AAAACAAGGA ACATTCCAGA GAAGATCACA 000080
000081 AGGATGCGAA TAAAATCGGA GCTGCACAGG GATCTTTGGG CTGTAATAGG AGGGGACACA CAGGGGTTGG AGTGCAGTGG 000160 000161 CACGATCTCG GCTCAGTGCA ACCTCCGCCT CCTGAGTTCA AGTGATTCTC CTGCCTCAGC CTCCCTAGTA GCTGGGATTA 000240 000241 CAGGACAAGG AGAGGGACAA ATTCCTTCTT GGCATCCTTA TGGCCCTGTG ACCTGCTAAT GAATGCTGAC TCTGAGTTGC 000320 000321 TACTAGAATT TGGTTTCCTT GTGGCTTCCC AGGAATTGGT CTCACTCTGC TCACTCTGTC TCCCAAGCTG GAGTGCAGTG 000400 000401 GTACAGTCAC GGCTCACTGC AGCCTCCACT TCCTGGACTC AAGTGATCTT CTCACTTCAG CCTTCTGAGT AGCTGGGACT 000480 000481 ACAGCCCCCT CTGCAGCTCT TCATGGGGGT CCACTCAAGT CAGAAGCCAC ATTTGGGTGT GATTCAGAGA GCTGTTTATG 000560 000561 CAAAACCAGC TTTGTCACCA TCAGGCAAGG CACCTGAATT CCCACCGCAG AGAGTGTTGT GGCCGTGAGG ACTTTTCTGT 000640 000641 CACCAGCCAT TTCCAGGTAG ACCCAGTGTA ATCACAAGCA TCCTTGTAAG TGGCAAAGAG GCAGAGGAGA CAGCGCCAGA 000720 000721 GAGGCAGCTG CATGAGAAGG ATCAAGATGT TGCTGACTTT GAAGTTGGAA GAAGAAGGCC ATGAGCCTCA GTATGTGGGC 000800 000801 GGCTTCTAGA AGCTGGAAGG GGCAAGGAGA TGGATTTGAC CCTTCAGCCT CCAGGGGCAG CTGTACCTGC CATCACTGAT 000880 000881 TGTAGCCTGG TGAGGCCTGT TTTAGACTTC TGACCTGTAG AGCTGTAACA TAATACATTT GGGTTGTTTT CAACCACTAA 000960 000961 GTTTGTGGTA ATTTGTTGTA GCAGCTGTAG AAAATGAATA CATATGAATC CTCTGGCATT TGTTTGAGAT TTGCTCTATG 001040 001041 GCCTAGTATG TGGTTGTAAA TGTTCCATCT GTGCCTGAAA AAATGTATAT TTCT |
