Difference between revisions of "ENST00000512099.1"

Revision as of 18:16, 15 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000512099.1
Source	Gencode19
Same with	lnc-SAP30-5:1,NONHSAT099258
Classification	intergenic
Length	2138 nt
Genomic location	chr4+:174448421..174504526
Exon number	4
Exons	174448421..174449652,174452118..174452229,174457999..174458121,174503856..174504526
Genome context
Sequence	000001 CTCCTCCTCA CTGCTTGAGC TCCAGGGCCC AGACGTGCTG CGGCCAGCCC GTCCGGCCTT TGGTTTTCTT GTCGTTGCTG 000080 000081 CTCACTGTGC TTTTCAAGAT TTCGTTCTGG ACAGAGGAAA GGCGAGGGCG AGAAAAGTGG AAAGAGAAAT TCAGAGAGGA 000160 000161 TACCTGGTTC CACACCAACC CGGAGCTTCC TGCGCCGGAG GAGACAGTGA ACCAGAGAGG AAAGGATACG ATGGGGGAGT 000240 000241 CCCAGCCCCT GCAGAGAAGC TACCAAGGTT AGCGCTACCC TAGCCGGCGG GGAGGCCTCG GCGCTGCAGC GCTCAACAAC 000320 000321 CGGATCCACA AGTTTATAAA CAACCGCCCG TTTTCGAGTC GTTTATGGAG GAGCGGGGGG CCTTTTCTCT TACTCCAGAT 000400 000401 GTAGGGGCGG GAGCTGGAGT CGGCGCTAAG TCTGGTTTCT CTGTTTTCAT TAGCAATCCT AGATCCACAT CTAGGAAAAA 000480 000481 TAGGGCGAAG GAGCCTCTGT TTCGGCCTGG GCCTCTCGGC CAGAGGCTCT CGGCCTCCAG CTCAGCAGTG CCTCTCCTCC 000560 000561 AAGGCTTCTG AAATCTCTGG TTATTCGGGA GGTCACTCGA TTATGCAGCC ACCAAAGGGC TGCAGGGGCC AAAGAAGAAA 000640 000641 AATTCGACAA ATGCAATTAT TTTCCGGGCC CTTCGTGGAC ATAGCTCTAT CCTGCACCAC TGCCCTGTGG GCACTTGGTA 000720 000721 GGAATCTGAG AAAATTTTAA GCGGCTCAAT TTACTTTCGT GTTATTTTTA ATAACAATGA CCATAGTAAT GCCTTTTCCC 000800 000801 CCTTAAAATG TACAGGCTTA TTCAAATAAA ATTAGAAATG CCAATGGAAT ATACTCATCT GGGAAATTAC ATTTTAACGT 000880 000881 CATAGCCAAG GAAAAATTGG AGCTGTATTT TGAAGTCAAA AGTACTTATT TTATGTTTAC CATTACGTTT TCCGGGCATA 000960 000961 GTATGAGAAC AACCACAAAA CTCAGGGCTC AGTCTCTGGC AGCCTCCTTC TGGGAGTGGG GTAGGGGGTG CGATCAATAG 001040 001041 TGAAATAATT GGAATCAAGG GCTTCTTCGA GACTTATTCT GGAAACATCT GAAAGCAAGA TTGGATTGGA GGCCAAAAGA 001120 001121 AGGGTCTAAC AGAGACGGGG TGAGGCATCC AGACCAGTGC GATCGCGATC GATCGCGACC CAGAGTTTTC AAGGTCCGTC 001200 001201 CTAAGTACTA GGGGAGCAGC GATAACCCGG AGGGACACCA GTCCCTACGA AGACCTTGGG CGATTTTGAA GTGCGGGCAC 001280 001281 CTCGATTCCC CGAATCTGTA GTGTGGCTGG TATCGGTGTT CCCCTGGTTT AACTAGCCTG TTTGAAGGCA CAGATCATTC 001360 001361 ATGGGGATGT ATAACCGAAA CCAGTCCTCT CCACCGCCTG GGGATCTTCA CTTTCGCAGT CTACGACTGC CTGTGACTCC 001440 001441 AGAAAGACAA ACTGCAGATT GGCCAAGATG GGGAAATTGA GGCAGAGAAG CCAAGACATG TGCTAAAGGT CATGCAGGCT 001520 001521 ATGAATGGAG CTGGAATGTG AACGCAGGCC ATATGACCCC AGAGCCCATG TTCTTGAACC CTTAGAAAGA CAGCAGCAAC 001600 001601 ACACCTGGTG CAGCAGCTGC TTAGTTGGAG TGGCTGACAA GGTTGGCAGA GGATCCCGTT CCTCCCGTGG AGTGGCTGCC 001680 001681 ATGATACTGC CTGCACTGAA GCTGCTCCTA TTTCTGAAAT ATGTATTGTT ATTTTTTTCC CTGCATGTTG AACATTATAC 001760 001761 TCTTCTGTTC TTTCGCATTC TCTTCTTCCC TTCCGGATGA CTTCTAGGGT TTTTGTGATT CTGTAATTCT AAAGGAGAAA 001840 001841 GGATAATAAG AATTGTGAGG CCGGGCGCGG TGGCTCATGC CTGTAATCAC AGCACTTTGG GAGGCCAAGG TGGGCGGATC 001920 001921 ACTAGGTGAG GAGATGGAGA CCATCCTGGC TAACACGGTG AAACCCCGTC TCTACTAAAA ATACAAAAAA TTAGC

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 sequence = <dnaseq>CTCCTCCTCACTGCTTGAGCTCCAGGGCCCAGACGTGCTGCGGCCAGCCCGTCCGGCCTTTGGTTTTCTTGTCGTTGCTGCTCACTGTGCTTTTCAAGATTTCGTTCTGGACAGAGGAAAGGCGAGGGCGAGAAAAGTGGAAAGAGAAATTCAGAGAGGATACCTGGTTCCACACCAACCCGGAGCTTCCTGCGCCGGAGGAGACAGTGAACCAGAGAGGAAAGGATACGATGGGGGAGTCCCAGCCCCTGCAGAGAAGCTACCAAGGTTAGCGCTACCCTAGCCGGCGGGGAGGCCTCGGCGCTGCAGCGCTCAACAACCGGATCCACAAGTTTATAAACAACCGCCCGTTTTCGAGTCGTTTATGGAGGAGCGGGGGGCCTTTTCTCTTACTCCAGATGTAGGGGCGGGAGCTGGAGTCGGCGCTAAGTCTGGTTTCTCTGTTTTCATTAGCAATCCTAGATCCACATCTAGGAAAAATAGGGCGAAGGAGCCTCTGTTTCGGCCTGGGCCTCTCGGCCAGAGGCTCTCGGCCTCCAGCTCAGCAGTGCCTCTCCTCCAAGGCTTCTGAAATCTCTGGTTATTCGGGAGGTCACTCGATTATGCAGCCACCAAAGGGCTGCAGGGGCCAAAGAAGAAAAATTCGACAAATGCAATTATTTTCCGGGCCCTTCGTGGACATAGCTCTATCCTGCACCACTGCCCTGTGGGCACTTGGTAGGAATCTGAGAAAATTTTAAGCGGCTCAATTTACTTTCGTGTTATTTTTAATAACAATGACCATAGTAATGCCTTTTCCCCCTTAAAATGTACAGGCTTATTCAAATAAAATTAGAAATGCCAATGGAATATACTCATCTGGGAAATTACATTTTAACGTCATAGCCAAGGAAAAATTGGAGCTGTATTTTGAAGTCAAAAGTACTTATTTTATGTTTACCATTACGTTTTCCGGGCATAGTATGAGAACAACCACAAAACTCAGGGCTCAGTCTCTGGCAGCCTCCTTCTGGGAGTGGGGTAGGGGGTGCGATCAATAGTGAAATAATTGGAATCAAGGGCTTCTTCGAGACTTATTCTGGAAACATCTGAAAGCAAGATTGGATTGGAGGCCAAAAGAAGGGTCTAACAGAGACGGGGTGAGGCATCCAGACCAGTGCGATCGCGATCGATCGCGACCCAGAGTTTTCAAGGTCCGTCCTAAGTACTAGGGGAGCAGCGATAACCCGGAGGGACACCAGTCCCTACGAAGACCTTGGGCGATTTTGAAGTGCGGGCACCTCGATTCCCCGAATCTGTAGTGTGGCTGGTATCGGTGTTCCCCTGGTTTAACTAGCCTGTTTGAAGGCACAGATCATTCATGGGGATGTATAACCGAAACCAGTCCTCTCCACCGCCTGGGGATCTTCACTTTCGCAGTCTACGACTGCCTGTGACTCCAGAAAGACAAACTGCAGATTGGCCAAGATGGGGAAATTGAGGCAGAGAAGCCAAGACATGTGCTAAAGGTCATGCAGGCTATGAATGGAGCTGGAATGTGAACGCAGGCCATATGACCCCAGAGCCCATGTTCTTGAACCCTTAGAAAGACAGCAGCAACACACCTGGTGCAGCAGCTGCTTAGTTGGAGTGGCTGACAAGGTTGGCAGAGGATCCCGTTCCTCCCGTGGAGTGGCTGCCATGATACTGCCTGCACTGAAGCTGCTCCTATTTCTGAAATATGTATTGTTATTTTTTTCCCTGCATGTTGAACATTATACTCTTCTGTTCTTTCGCATTCTCTTCTTCCCTTCCGGATGACTTCTAGGGTTTTTGTGATTCTGTAATTCTAAAGGAGAAAGGATAATAAGAATTGTGAGGCCGGGCGCGGTGGCTCATGCCTGTAATCACAGCACTTTGGGAGGCCAAGGTGGGCGGATCACTAGGTGAGGAGATGGAGACCATCCTGGCTAACACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCGGGGTGTGGTGGCGGGCGCCTGTAGTCCCAGCAACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATTGCGCCACTGCACTCCAGCCTGGGCGAAGAGGGAGACTCCATCTT</dnaseq>|
 }}
-[[Category:Intergenic]][[Category:lnc-SAP30-5]][[Category:NONHSAG039361]]
+[[Category:Intergenic]][[Category:lnc-SAP30-5]][[Category:NONHSAG039361]][[Category:ENSG00000237125.4]]