Difference between revisions of "Lnc-PPIAL4G-4:2"

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sequence = <dnaseq>TCCTCCGGAAGTGCGGATCCCAGCGGTGGTCGTGTAGCTGAGCAGGCCTGGGGCTTGGTTCTATGTCCCTGTGGCTATGTTTCCAGTGTCCTCTGGGTGTTTCCAAGAGCAACAAGAAACGAATAAATCTCTGGTGACTTTTTGAAAAAATAGTATCTCTTGTTGAAAGAAATGCTCCATCTGTGATTTCAAGTCTCTCACTTGAGTGAATTGGATGGAAGTGGTGAATTTCAGCCAAAGTGGCCAAAGAAATCCTGTTCCTGTGATAATGACGCCATCAGCCTCTGCACCTCTGTCTTCCCTTCTGCCACATGTTGTCTGTTCTCCGTGACTTTGGCTGTCTCTTCAGTGCTGGTGGGATATATCAGAAAGTGATGGAAGATGTGGCACTGTGCCCTCACCCAGAAGCTGGCCATGTGGTTGGCTCCTCCACCAGAATGGATGCTCTGGGTGCTCTTTGAGCCAGCTTGGCTTTGCCTAGCATGCACAGGCTCCGGGTACCGAAATGTTGCTCTGAGTGAGCTTGTCCTGCCTTGGGCCAAATTCTGTTAGGCCAGGGCCACAAAAGGCCGAGTCCCACGGGTGGTAATCCTGGCTGCTTTCTGCACTTCCACATAAAGACCTCCTGAAGATGGCCTGTGGTCTACCTCTTTGCAACCAAGAAGCCCGCAGTGCCATATGAATCCTCAGGCATGGACTGGAGCCCCCGAGGAAGCACACACCCTGCTCCTGAGCCTGCTGCTCATTTTCTCTGTGTGGCTCCATTTGTGTCACAGTTGTTGCACAGACTTGTGCATGCTGGGCAAGGCCAAGCTGGCTCAAAAAGCAACCAGCCACCTCTGCAAGGTTGTGCCAGGAGCCGGTGGACCGGCCACCAACCTCACTCACTGCTGGTCAGGTTACATCAGTTATTCTACCCTAGAGGTAGGGCCCCAGTGCCATATGCTTTTCCTCAGGCCTCTGCTCTATCAGTCATCAGGCGGCAACCACTCAGGCTGTGGGAACCTGGCCATCCCTCCTTCCTTGAGTAGCTGAGGTTGCTGGCTTGTCCGCCTACTACAGGCACAGCCTTGCAGATGTGGCTAGTTGCTCTGAGCCAGCTTGGCCTTTCCTGGCATGCCTAGGCCCCAGGTACTGACACTCTGCTCCGAGTCAGCTTGTCCTGCCTTGGGTCAAATTCTAAGTCTGGCCAGGGCCACAGAAGGCCCAGTCCCCTGGGTGCTAATCTTGGCTGCTTTCTGCACTTGAACATAAAGTCCTCCTCAAGAAAGCCTGTGGTCTGCCTGTTGGCGACCAAGAAACCTA</dnaseq>|
 
sequence = <dnaseq>TCCTCCGGAAGTGCGGATCCCAGCGGTGGTCGTGTAGCTGAGCAGGCCTGGGGCTTGGTTCTATGTCCCTGTGGCTATGTTTCCAGTGTCCTCTGGGTGTTTCCAAGAGCAACAAGAAACGAATAAATCTCTGGTGACTTTTTGAAAAAATAGTATCTCTTGTTGAAAGAAATGCTCCATCTGTGATTTCAAGTCTCTCACTTGAGTGAATTGGATGGAAGTGGTGAATTTCAGCCAAAGTGGCCAAAGAAATCCTGTTCCTGTGATAATGACGCCATCAGCCTCTGCACCTCTGTCTTCCCTTCTGCCACATGTTGTCTGTTCTCCGTGACTTTGGCTGTCTCTTCAGTGCTGGTGGGATATATCAGAAAGTGATGGAAGATGTGGCACTGTGCCCTCACCCAGAAGCTGGCCATGTGGTTGGCTCCTCCACCAGAATGGATGCTCTGGGTGCTCTTTGAGCCAGCTTGGCTTTGCCTAGCATGCACAGGCTCCGGGTACCGAAATGTTGCTCTGAGTGAGCTTGTCCTGCCTTGGGCCAAATTCTGTTAGGCCAGGGCCACAAAAGGCCGAGTCCCACGGGTGGTAATCCTGGCTGCTTTCTGCACTTCCACATAAAGACCTCCTGAAGATGGCCTGTGGTCTACCTCTTTGCAACCAAGAAGCCCGCAGTGCCATATGAATCCTCAGGCATGGACTGGAGCCCCCGAGGAAGCACACACCCTGCTCCTGAGCCTGCTGCTCATTTTCTCTGTGTGGCTCCATTTGTGTCACAGTTGTTGCACAGACTTGTGCATGCTGGGCAAGGCCAAGCTGGCTCAAAAAGCAACCAGCCACCTCTGCAAGGTTGTGCCAGGAGCCGGTGGACCGGCCACCAACCTCACTCACTGCTGGTCAGGTTACATCAGTTATTCTACCCTAGAGGTAGGGCCCCAGTGCCATATGCTTTTCCTCAGGCCTCTGCTCTATCAGTCATCAGGCGGCAACCACTCAGGCTGTGGGAACCTGGCCATCCCTCCTTCCTTGAGTAGCTGAGGTTGCTGGCTTGTCCGCCTACTACAGGCACAGCCTTGCAGATGTGGCTAGTTGCTCTGAGCCAGCTTGGCCTTTCCTGGCATGCCTAGGCCCCAGGTACTGACACTCTGCTCCGAGTCAGCTTGTCCTGCCTTGGGTCAAATTCTAAGTCTGGCCAGGGCCACAGAAGGCCCAGTCCCCTGGGTGCTAATCTTGGCTGCTTTCTGCACTTGAACATAAAGTCCTCCTCAAGAAAGCCTGTGGTCTGCCTGTTGGCGACCAAGAAACCTA</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:lnc-PPIAL4G-4]][[Category:NONHSAG002651]]
+
[[Category:Intergenic]][[Category:lnc-PPIAL4G-4]][[Category:NONHSAG002651]][[Category:Transcripts]]

Latest revision as of 04:58, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-PPIAL4G-4:2

Source

LNCipedia2.1

Same with

NONHSAT005728

Classification

intergenic

Length

1305 nt

Genomic location

chr1-:143429872..143467644

Exon number

4

Exons

143429872..143430840,143431283..143431485,143465380..143465438,143467571..143467644

Genome context

Sequence
000001 TCCTCCGGAA GTGCGGATCC CAGCGGTGGT CGTGTAGCTG AGCAGGCCTG GGGCTTGGTT CTATGTCCCT GTGGCTATGT 000080
000081 TTCCAGTGTC CTCTGGGTGT TTCCAAGAGC AACAAGAAAC GAATAAATCT CTGGTGACTT TTTGAAAAAA TAGTATCTCT 000160
000161 TGTTGAAAGA AATGCTCCAT CTGTGATTTC AAGTCTCTCA CTTGAGTGAA TTGGATGGAA GTGGTGAATT TCAGCCAAAG 000240
000241 TGGCCAAAGA AATCCTGTTC CTGTGATAAT GACGCCATCA GCCTCTGCAC CTCTGTCTTC CCTTCTGCCA CATGTTGTCT 000320
000321 GTTCTCCGTG ACTTTGGCTG TCTCTTCAGT GCTGGTGGGA TATATCAGAA AGTGATGGAA GATGTGGCAC TGTGCCCTCA 000400
000401 CCCAGAAGCT GGCCATGTGG TTGGCTCCTC CACCAGAATG GATGCTCTGG GTGCTCTTTG AGCCAGCTTG GCTTTGCCTA 000480
000481 GCATGCACAG GCTCCGGGTA CCGAAATGTT GCTCTGAGTG AGCTTGTCCT GCCTTGGGCC AAATTCTGTT AGGCCAGGGC 000560
000561 CACAAAAGGC CGAGTCCCAC GGGTGGTAAT CCTGGCTGCT TTCTGCACTT CCACATAAAG ACCTCCTGAA GATGGCCTGT 000640
000641 GGTCTACCTC TTTGCAACCA AGAAGCCCGC AGTGCCATAT GAATCCTCAG GCATGGACTG GAGCCCCCGA GGAAGCACAC 000720
000721 ACCCTGCTCC TGAGCCTGCT GCTCATTTTC TCTGTGTGGC TCCATTTGTG TCACAGTTGT TGCACAGACT TGTGCATGCT 000800
000801 GGGCAAGGCC AAGCTGGCTC AAAAAGCAAC CAGCCACCTC TGCAAGGTTG TGCCAGGAGC CGGTGGACCG GCCACCAACC 000880
000881 TCACTCACTG CTGGTCAGGT TACATCAGTT ATTCTACCCT AGAGGTAGGG CCCCAGTGCC ATATGCTTTT CCTCAGGCCT 000960
000961 CTGCTCTATC AGTCATCAGG CGGCAACCAC TCAGGCTGTG GGAACCTGGC CATCCCTCCT TCCTTGAGTA GCTGAGGTTG 001040
001041 CTGGCTTGTC CGCCTACTAC AGGCACAGCC TTGCAGATGT GGCTAGTTGC TCTGAGCCAG CTTGGCCTTT CCTGGCATGC 001120
001121 CTAGGCCCCA GGTACTGACA CTCTGCTCCG AGTCAGCTTG TCCTGCCTTG GGTCAAATTC TAAGTCTGGC CAGGGCCACA 001200
001201 GAAGGCCCAG TCCCCTGGGT GCTAATCTTG GCTGCTTTCT GCACTTGAAC ATAAAGTCCT CCTCAAGAAA GCCTGTGGTC 001280
001281 TGCCTGTTGG CGACCAAGAA ACCTA
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