Difference between revisions of "Lnc-COPG2-1:1"

Latest revision as of 04:00, 17 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-COPG2-1:1
Source	LNCipedia2.1
Same with	NONHSAT123349
Classification	intronic(AS)
Length	3242 nt
Genomic location	chr7-:130126898..130131013
Exon number	2
Exons	130126898..130129808,130130683..130131013
Genome context
Sequence	000001 TTAAAAGGCA TCCCTTACGC CTTTGAAAAG TGTAGAGTAT CACGAAGTGT CTGTGTTCAT TTTCTGACCG TAAACTGAAA 000080 000081 TACTGGTGAA CAAACGTGGG GTGCGAGCGG GTGAGCGGGG CGGCCGGCCG GTGCCCGCTG CATCCAGAGG GGGCGCTGCA 000160 000161 GGCCTCCCTT CGGCTGCGCA CGGCCCGGGC CCTCCGCGGC TCTGCAACTC TGCACCCCGA AAGGTTCGGT GCTGGACCGC 000240 000241 GGGGCATCCA ACCCGGGACC GGGGGCGACC CACGGACACT GAGGAAACTA CCGCCTATAA GCCTATCATC AGAACCTCTG 000320 000321 GCACAACACA GGCCAGAAAC ACCAGCATCC AAGATGAAGG CAATTTTCTG TTTATGGACT GAGTACCCCA CAAAAGATCT 000400 000401 TATTCTGAAG GCCATGGAAC ATGTCTACCC ACATGGATCA AGTGGGCAGA CTGGAGGAGA AACAGTTTAA AGGCCCTGGG 000480 000481 GGAAGGAGGG AGCGCCAGGG AGAGCTCCTG AAGACAACAG GAATTCCAAG TCTGGCACTC GGGAGAAATC CTCCCTTCAG 000560 000561 ACATTATTGA TGTCTGGCCG AGGAGTTAGG AAAAACTTCC TTGAAGGAGG GATTGAGGTT GAGATGGGCA TGGAACCCAG 000640 000641 ATCTTAGGCA GAGAAAGCAT ATTCCTGTTT GGAAGAACCC TGAGTACAGA AGTCAGCTCA AAGATATCAG CTTGGCCCAA 000720 000721 CCAGGAATTC GCTGTGGGAA GTCTAAGAGA GAAAATGCTG GCCATAATCC CCCAGGAGCC AAAGAGTTAA CGAATCTTCT 000800 000801 AAATGTGCCT GATTTACTTC CAGAAAGGAG CTTCCTCCGC AGGGGGAGAA TTTGACCCAA GGTATAAAAC ACTTGGAGCC 000880 000881 CTGAGAAAAC ACACAGCCAC ACATAAATTC AAAGTCGGCT CTGGCTTGCT CGAAGTTGCA CCCTTTCAGT TCCTCTGGAC 000960 000961 AGATGCTATC CTGGACTGTG CAGGATATCT CATGCAGTAG TACTCCCTCA GCCAGTGGCT TATCACACAT TCTTGTCACA 001040 001041 TTCCAAGTCT AACACAGTTC CGCCTCATGA TAAGACCTCA GATCTGTGCA AAAATTCATG TAGAAAGCTC TGCATTTATT 001120 001121 ATCTCGCTGA TTCACAACAG TGGTATGGGA TCAGCAGAGA TGGTACCACA GATTCAAGAA CCATATTTTT CTAACCCCAG 001200 001201 TTTGAGACCC ATAATATGAC AAGTGCAGGA TATTTATGGA GACAACAAGA CACAACCGGG ACTGCCACTT TCAAGAGCCA 001280 001281 TCATTGTAGA TTCAAATCAA CTAAAACACT TCATAATGGG AGAAACTTGG TTGAACAGGA GCACATGTTA ACGAAGGGGT 001360 001361 TTTGGTTGAG AAACTTACTG AATCAGTAAG ACAGGACCCT TAAAAAGGCT ACTGTGACTG CAGACTGAGG GGAAGTACCA 001440 001441 AAAATAAGCT AATCCTACTC TATTATGCTG GTTAGAACTC ACAGAAAGCA TTTTATTCTG TTCTACAGAG CAGATACATA 001520 001521 TTGAAACAGA GACAAATAGG AATGTGTTCA GAGAAGGTCA ACTAAATGAA TTGCAAACTG AAGGTGTAAC AGTTCTCGTA 001600 001601 TTTTAAGCTC CTACCATGAG CATGGATCTT CACCCAACAT ATCCCTGATC CTCACAGTAG CCTGGCTAGA TGAGTATTTT 001680 001681 CACTCACAGA TTTCAGAGAG AGATACGGCA GCTCGGAACG CTAAGTGTTA GGATGTGAAG GGGCTGGGAA CTGAACGCAG 001760 001761 ATGTGCCTGG CTCCAAAGTT GGCCTTCTTT CCACTACTCC ACACTGCCTC CCTGTTTGAA ATAGATGGGC ATGTTTGGTT 001840 001841 TGAAGAAAAG AAGCCTTGTG GAGTAAGTAG AAGAAGGAAA TGTGTTAGCA GTCCTCAAAT ATTTGTGGAA GCAGCATTAG 001920 001921 ACATTTTATT CTGTATGGC

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 sequence = <dnaseq>TTAAAAGGCATCCCTTACGCCTTTGAAAAGTGTAGAGTATCACGAAGTGTCTGTGTTCATTTTCTGACCGTAAACTGAAATACTGGTGAACAAACGTGGGGTGCGAGCGGGTGAGCGGGGCGGCCGGCCGGTGCCCGCTGCATCCAGAGGGGGCGCTGCAGGCCTCCCTTCGGCTGCGCACGGCCCGGGCCCTCCGCGGCTCTGCAACTCTGCACCCCGAAAGGTTCGGTGCTGGACCGCGGGGCATCCAACCCGGGACCGGGGGCGACCCACGGACACTGAGGAAACTACCGCCTATAAGCCTATCATCAGAACCTCTGGCACAACACAGGCCAGAAACACCAGCATCCAAGATGAAGGCAATTTTCTGTTTATGGACTGAGTACCCCACAAAAGATCTTATTCTGAAGGCCATGGAACATGTCTACCCACATGGATCAAGTGGGCAGACTGGAGGAGAAACAGTTTAAAGGCCCTGGGGGAAGGAGGGAGCGCCAGGGAGAGCTCCTGAAGACAACAGGAATTCCAAGTCTGGCACTCGGGAGAAATCCTCCCTTCAGACATTATTGATGTCTGGCCGAGGAGTTAGGAAAAACTTCCTTGAAGGAGGGATTGAGGTTGAGATGGGCATGGAACCCAGATCTTAGGCAGAGAAAGCATATTCCTGTTTGGAAGAACCCTGAGTACAGAAGTCAGCTCAAAGATATCAGCTTGGCCCAACCAGGAATTCGCTGTGGGAAGTCTAAGAGAGAAAATGCTGGCCATAATCCCCCAGGAGCCAAAGAGTTAACGAATCTTCTAAATGTGCCTGATTTACTTCCAGAAAGGAGCTTCCTCCGCAGGGGGAGAATTTGACCCAAGGTATAAAACACTTGGAGCCCTGAGAAAACACACAGCCACACATAAATTCAAAGTCGGCTCTGGCTTGCTCGAAGTTGCACCCTTTCAGTTCCTCTGGACAGATGCTATCCTGGACTGTGCAGGATATCTCATGCAGTAGTACTCCCTCAGCCAGTGGCTTATCACACATTCTTGTCACATTCCAAGTCTAACACAGTTCCGCCTCATGATAAGACCTCAGATCTGTGCAAAAATTCATGTAGAAAGCTCTGCATTTATTATCTCGCTGATTCACAACAGTGGTATGGGATCAGCAGAGATGGTACCACAGATTCAAGAACCATATTTTTCTAACCCCAGTTTGAGACCCATAATATGACAAGTGCAGGATATTTATGGAGACAACAAGACACAACCGGGACTGCCACTTTCAAGAGCCATCATTGTAGATTCAAATCAACTAAAACACTTCATAATGGGAGAAACTTGGTTGAACAGGAGCACATGTTAACGAAGGGGTTTTGGTTGAGAAACTTACTGAATCAGTAAGACAGGACCCTTAAAAAGGCTACTGTGACTGCAGACTGAGGGGAAGTACCAAAAATAAGCTAATCCTACTCTATTATGCTGGTTAGAACTCACAGAAAGCATTTTATTCTGTTCTACAGAGCAGATACATATTGAAACAGAGACAAATAGGAATGTGTTCAGAGAAGGTCAACTAAATGAATTGCAAACTGAAGGTGTAACAGTTCTCGTATTTTAAGCTCCTACCATGAGCATGGATCTTCACCCAACATATCCCTGATCCTCACAGTAGCCTGGCTAGATGAGTATTTTCACTCACAGATTTCAGAGAGAGATACGGCAGCTCGGAACGCTAAGTGTTAGGATGTGAAGGGGCTGGGAACTGAACGCAGATGTGCCTGGCTCCAAAGTTGGCCTTCTTTCCACTACTCCACACTGCCTCCCTGTTTGAAATAGATGGGCATGTTTGGTTTGAAGAAAAGAAGCCTTGTGGAGTAAGTAGAAGAAGGAAATGTGTTAGCAGTCCTCAAATATTTGTGGAAGCAGCATTAGACATTTTATTCTGTATGGCTCCAATGAGTGCAAATTGTAGAGAAACAGATGTCGATTCAACATAAAGAATTTTCCAACATAGGGGCTGTCTAGAGGGATTGGGTGGCTCAGCCATTTTGGTATGGGACAAATTCTCTGTCCACTGGGGGCTGGGTAACCCTGTGGCAGGTATGCGAGCTCTGCATGTAAGACAATGAATGACCTGCAAGGTCTTTTCCCATCTGATGTAAAATAAGGCTCCAAGATGAACTGGAACTTGGCCAGGGTGATCCTCTACTGAGGGGACAAATTCACAGCTCAGTCTTCCCTAGTTATGTCCCTCAGCCCAGAACCCTTGGTACAACATGCTGCTTTGTACTGAGGGCAAGGCAAATTGAAGACATTATCATCAATAAAATCACATCGAGCCCGCTCTCAACCAAATTAACCAATGTGGCCGGGCGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGAGGCTGAAGCAGGCGGATCACTTCAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACCAAAAATACAAAAATTAGCCATGTGTAGTGGTGTGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATAGCTTGAGTCCCGGAGGCAGAAGTTGCAGTGAGATGAGATGGCGTCACTGCACTCCAGCCTGGGTGACAGAGCGAGACTTCATCTCAAAAACAAAACCAAACAAAAACAAATTAACCAATATATCCCTGAAGCTACTGGTGTGTTCCTCTTCAGGCCCATTTTTGAGTAAAAGTGTTTGGCTGTAAAAAGCTCAAAAGATGAGTGGCAGACGAGGGAAGCAGTGGAACTGAATAATCTCTTACCCAAATAAGATGAACCTAAATGACAGATGGTTGTTTCTCCAGGTGACAGTATTAGTGGGCACCCCTAAACTATCTTCACACACCCTCTGCATTACTCCACACATCCCATTATCCCACAGCTGGTACTTCTTCACCAGGTACTCCTGCCCCACTATCCCACACCTAGAGGACATTTTATCCACTCAAACAGATAAATAGGCTGAAGGATTCTAATTAAGTAATAGAATCTTGCATTTTTATAGCTCTTTACCCTTTCACATATATCATCTCATTTGTCACTCACCACAGTCCCCTAAGGAAAACAGCTACTTTCTTTCAGACAGGCAATTTTCTAGCTGCCTGGGAGCTAGGAGGAGGAAAGGGCTTCAGCACAGGCACAGTCGCTCTTTCTCGCTTTTTTTTTTTTTTCCTGTTACTACCTTCCCACATTAGATTATGCCTCCAGCCAGAA</dnaseq>|
 }}
-[[Category:Intronic(AS)]][[Category:lnc-COPG2-1]][[Category:NONHSAG048806]]
+[[Category:Intronic(AS)]][[Category:lnc-COPG2-1]][[Category:NONHSAG048806]][[Category:Transcripts]]