Difference between revisions of "ENST00000580278.1"

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sequence = <dnaseq>TGGATTGAACTCGTGATTAGCCTTCTTCAGCATATGTAAAATGATGTCTGCTTTTCTTCTCTATTTGTCATTTTACCGACTTTTTATATATAGTAGTTTCCCCATATCCATGGAGGATGTATCCCAAGACCCCCAGAGGATGCTTGAAACCACAGATAATAACAAACTCTATGTATCCTATGATTTTTCCTGTACATCCTTACCTATCATAAAAAATTGAAGTTGAAGTATAAGGAGAATTTTTACATCACCCAGGTTCTAATTTGGAAGGTTTCTAACAGCCCTCTGTCCTCTTCTGGTGCTCACTGTGAAAGAATTTGCACCCTGCAACACTAAGTGTTTGTGCTAGAATCCACTTCTGATGTTGGCTGCTCTGACACAGCTTCCATTCGGAAGCGGTCACATCCAGACTCACCAGGCCTGAGATGTTGGAAGATGGAGAAGCCTTTGCCACAGGAAAAATCCTCCATGAACACAATGAAACTTGGCCTGCACCTGGGACATCCTTCTCCACGGCTAGTCTACAATGCAGGTGCTCTGCACACGCTCCCTGGCTGACCCCAACGCAGAGAAGATGCACGTGAGCCCACCCCCACAGCAGGCGTGGACATTTGCCTCCCTTTTATAATAGCTGTATTCAAATGAGGTATCCTGGAAGCCTCGTTCTGATAGGATGAGAGCAGACTCTGTACTACAACACGGATTGGATAATAGTCTCCAACTCTGATTGGTTAAGATTGTGCAATCAGAGATGGAAATTATTATCCAATAAGAGTTGTCAAAAAGGTTCCTTGCGCAGTGGTCGTCATAGTTCAGAAGCGACCGGGAGCGTGTGTGGTGCGCGCCTGCCTTGAGGCCAGGCCTCAGAGAAGGGTGTCCCAGATGTAGGCAAAGCGTCCTCCATGTGTTCCTGGAGGACCGTCCCAAGTCCTTCTCCATTCTCCCAACCTCTTGGGCCTGGTAAGTCTGGATGCGAGCGCATCCCACGGGGCCGAGGCACAGGGAGAGAGGAACGGGGCAGAGGGAGGAAAGCGTGTGCAGGGGCCCGGAGCGCCAGGCTGCCAGGGCTTCACCCCATGGCCACCGGGGAGCTGTGGCCCCACTCGGCCCAAGGCAGAGTCCGGCCCTCCTGCTGCTGGCACTGTCACCTCCCTGGGGTCCTGCCTTCTGGGTCCCTGTGGGCCTCCTGTCATCTGGCACTGGAAATAAGCTAGCGAAGCAAAATTTCGTGAATATTGGCCTTTGCATCTTTTTCTTCATTTTCAGTGCTGGTTTTTCTGTTGGGTCATTTATGTTCTTACATTGATTTGAATAATTTTAAAATGTATTTTATAAATTAATTCTTCATGGGCTCATTTCTAGTGTAGATAGTTGTTTCCTAGTCTGGTCATTGTTCTTTAATTGTATTTTGCATTTCTTTCTTGCTGATACATAGGAATCTGATTGATTTTATGTATTCATCTTGCATCCTGTAGCCTGGCTTAATTCACATATTCATAACCATCATTTTTGGATTGTGGTGTATTTTTCATGTACATAATAGTGTCAGCCACATACAATAACAGCTGTATTGCTTAAATGTTGGTTCTTATACCTTTATTTTTGTTTTATTGTCCCAATTACACCTCCAGCACTGTGTGAAATAGAGGGGGTATGTCCAGGAAGTCTTGCTTGGTTCTGATTACAGTGGAAAAGCTTCAGTGGTCCTGTGTTGTAATTTCATTTTAGACAAGCTTAATCAGATTAAGGAAGCTGCCTTCCTTTGCATTTGCTAAGAGTTATGACTAATTGTTGAATTTGAATAAATGCTTTTTTTACA</dnaseq>|
 
sequence = <dnaseq>TGGATTGAACTCGTGATTAGCCTTCTTCAGCATATGTAAAATGATGTCTGCTTTTCTTCTCTATTTGTCATTTTACCGACTTTTTATATATAGTAGTTTCCCCATATCCATGGAGGATGTATCCCAAGACCCCCAGAGGATGCTTGAAACCACAGATAATAACAAACTCTATGTATCCTATGATTTTTCCTGTACATCCTTACCTATCATAAAAAATTGAAGTTGAAGTATAAGGAGAATTTTTACATCACCCAGGTTCTAATTTGGAAGGTTTCTAACAGCCCTCTGTCCTCTTCTGGTGCTCACTGTGAAAGAATTTGCACCCTGCAACACTAAGTGTTTGTGCTAGAATCCACTTCTGATGTTGGCTGCTCTGACACAGCTTCCATTCGGAAGCGGTCACATCCAGACTCACCAGGCCTGAGATGTTGGAAGATGGAGAAGCCTTTGCCACAGGAAAAATCCTCCATGAACACAATGAAACTTGGCCTGCACCTGGGACATCCTTCTCCACGGCTAGTCTACAATGCAGGTGCTCTGCACACGCTCCCTGGCTGACCCCAACGCAGAGAAGATGCACGTGAGCCCACCCCCACAGCAGGCGTGGACATTTGCCTCCCTTTTATAATAGCTGTATTCAAATGAGGTATCCTGGAAGCCTCGTTCTGATAGGATGAGAGCAGACTCTGTACTACAACACGGATTGGATAATAGTCTCCAACTCTGATTGGTTAAGATTGTGCAATCAGAGATGGAAATTATTATCCAATAAGAGTTGTCAAAAAGGTTCCTTGCGCAGTGGTCGTCATAGTTCAGAAGCGACCGGGAGCGTGTGTGGTGCGCGCCTGCCTTGAGGCCAGGCCTCAGAGAAGGGTGTCCCAGATGTAGGCAAAGCGTCCTCCATGTGTTCCTGGAGGACCGTCCCAAGTCCTTCTCCATTCTCCCAACCTCTTGGGCCTGGTAAGTCTGGATGCGAGCGCATCCCACGGGGCCGAGGCACAGGGAGAGAGGAACGGGGCAGAGGGAGGAAAGCGTGTGCAGGGGCCCGGAGCGCCAGGCTGCCAGGGCTTCACCCCATGGCCACCGGGGAGCTGTGGCCCCACTCGGCCCAAGGCAGAGTCCGGCCCTCCTGCTGCTGGCACTGTCACCTCCCTGGGGTCCTGCCTTCTGGGTCCCTGTGGGCCTCCTGTCATCTGGCACTGGAAATAAGCTAGCGAAGCAAAATTTCGTGAATATTGGCCTTTGCATCTTTTTCTTCATTTTCAGTGCTGGTTTTTCTGTTGGGTCATTTATGTTCTTACATTGATTTGAATAATTTTAAAATGTATTTTATAAATTAATTCTTCATGGGCTCATTTCTAGTGTAGATAGTTGTTTCCTAGTCTGGTCATTGTTCTTTAATTGTATTTTGCATTTCTTTCTTGCTGATACATAGGAATCTGATTGATTTTATGTATTCATCTTGCATCCTGTAGCCTGGCTTAATTCACATATTCATAACCATCATTTTTGGATTGTGGTGTATTTTTCATGTACATAATAGTGTCAGCCACATACAATAACAGCTGTATTGCTTAAATGTTGGTTCTTATACCTTTATTTTTGTTTTATTGTCCCAATTACACCTCCAGCACTGTGTGAAATAGAGGGGGTATGTCCAGGAAGTCTTGCTTGGTTCTGATTACAGTGGAAAAGCTTCAGTGGTCCTGTGTTGTAATTTCATTTTAGACAAGCTTAATCAGATTAAGGAAGCTGCCTTCCTTTGCATTTGCTAAGAGTTATGACTAATTGTTGAATTTGAATAAATGCTTTTTTTACA</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:ENSG00000233098.4]][[Category:lnc-DHRS7B-5]]
+
[[Category:Intergenic]][[Category:ENSG00000233098.4]][[Category:lnc-DHRS7B-5]][[Category:Transcripts]]

Latest revision as of 18:14, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000580278.1

Source

Gencode19

Same with

lnc-DHRS7B-5:10

Classification

intergenic

Length

1819 nt

Genomic location

chr17+:20833068..20842832

Exon number

3

Exons

20833068..20833280,20834906..20835084,20841406..20842832

Genome context

Sequence
000001 TGGATTGAAC TCGTGATTAG CCTTCTTCAG CATATGTAAA ATGATGTCTG CTTTTCTTCT CTATTTGTCA TTTTACCGAC 000080
000081 TTTTTATATA TAGTAGTTTC CCCATATCCA TGGAGGATGT ATCCCAAGAC CCCCAGAGGA TGCTTGAAAC CACAGATAAT 000160
000161 AACAAACTCT ATGTATCCTA TGATTTTTCC TGTACATCCT TACCTATCAT AAAAAATTGA AGTTGAAGTA TAAGGAGAAT 000240
000241 TTTTACATCA CCCAGGTTCT AATTTGGAAG GTTTCTAACA GCCCTCTGTC CTCTTCTGGT GCTCACTGTG AAAGAATTTG 000320
000321 CACCCTGCAA CACTAAGTGT TTGTGCTAGA ATCCACTTCT GATGTTGGCT GCTCTGACAC AGCTTCCATT CGGAAGCGGT 000400
000401 CACATCCAGA CTCACCAGGC CTGAGATGTT GGAAGATGGA GAAGCCTTTG CCACAGGAAA AATCCTCCAT GAACACAATG 000480
000481 AAACTTGGCC TGCACCTGGG ACATCCTTCT CCACGGCTAG TCTACAATGC AGGTGCTCTG CACACGCTCC CTGGCTGACC 000560
000561 CCAACGCAGA GAAGATGCAC GTGAGCCCAC CCCCACAGCA GGCGTGGACA TTTGCCTCCC TTTTATAATA GCTGTATTCA 000640
000641 AATGAGGTAT CCTGGAAGCC TCGTTCTGAT AGGATGAGAG CAGACTCTGT ACTACAACAC GGATTGGATA ATAGTCTCCA 000720
000721 ACTCTGATTG GTTAAGATTG TGCAATCAGA GATGGAAATT ATTATCCAAT AAGAGTTGTC AAAAAGGTTC CTTGCGCAGT 000800
000801 GGTCGTCATA GTTCAGAAGC GACCGGGAGC GTGTGTGGTG CGCGCCTGCC TTGAGGCCAG GCCTCAGAGA AGGGTGTCCC 000880
000881 AGATGTAGGC AAAGCGTCCT CCATGTGTTC CTGGAGGACC GTCCCAAGTC CTTCTCCATT CTCCCAACCT CTTGGGCCTG 000960
000961 GTAAGTCTGG ATGCGAGCGC ATCCCACGGG GCCGAGGCAC AGGGAGAGAG GAACGGGGCA GAGGGAGGAA AGCGTGTGCA 001040
001041 GGGGCCCGGA GCGCCAGGCT GCCAGGGCTT CACCCCATGG CCACCGGGGA GCTGTGGCCC CACTCGGCCC AAGGCAGAGT 001120
001121 CCGGCCCTCC TGCTGCTGGC ACTGTCACCT CCCTGGGGTC CTGCCTTCTG GGTCCCTGTG GGCCTCCTGT CATCTGGCAC 001200
001201 TGGAAATAAG CTAGCGAAGC AAAATTTCGT GAATATTGGC CTTTGCATCT TTTTCTTCAT TTTCAGTGCT GGTTTTTCTG 001280
001281 TTGGGTCATT TATGTTCTTA CATTGATTTG AATAATTTTA AAATGTATTT TATAAATTAA TTCTTCATGG GCTCATTTCT 001360
001361 AGTGTAGATA GTTGTTTCCT AGTCTGGTCA TTGTTCTTTA ATTGTATTTT GCATTTCTTT CTTGCTGATA CATAGGAATC 001440
001441 TGATTGATTT TATGTATTCA TCTTGCATCC TGTAGCCTGG CTTAATTCAC ATATTCATAA CCATCATTTT TGGATTGTGG 001520
001521 TGTATTTTTC ATGTACATAA TAGTGTCAGC CACATACAAT AACAGCTGTA TTGCTTAAAT GTTGGTTCTT ATACCTTTAT 001600
001601 TTTTGTTTTA TTGTCCCAAT TACACCTCCA GCACTGTGTG AAATAGAGGG GGTATGTCCA GGAAGTCTTG CTTGGTTCTG 001680
001681 ATTACAGTGG AAAAGCTTCA GTGGTCCTGT GTTGTAATTT CATTTTAGAC AAGCTTAATC AGATTAAGGA AGCTGCCTTC 001760
001761 CTTTGCATTT GCTAAGAGTT ATGACTAATT GTTGAATTTG AATAAATGCT TTTTTTACA
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