Difference between revisions of "ENST00000569279.1"

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sequence = <dnaseq>AACTGTAGTGCTAAGACTAAATGCTTCACGATCCTTGGAGGGGTAAGAGGTGACGTGAGCCACGGGGAAGCCACCTAGGTCACCCTCAAAACTATCCTTTGCATGTCCCACAGCAACTCCAAGAAAACAATCTGAACCTAAGACAACAGACGCAGCTGCACCTGGGACAGCAGACACAGCTGGGCCTGGGACAATGGACACAGCTGTACCTAGAAAAGCAGAAACAGCTGTGCCTGGGAAAAGGAACACAGCTGTGCCTGGAACAGCAGACCCAGCTTCACCTGGGACAGCAGACACAGCAGAACCTATGAGAACAACCACTCCAACAGTTCTGGCCTCCTGGCCTTCTCTCACCCAGAGCACCAACAGCACCCAGCCCACGGCTCTTACCAGCCCCCTCACCAGGTGAGCAGAGCTGGGCTCCCACAGACCTTTCCCTAGGCTGCCCCATGACTGCTCCTTCAGATGCTCTCACCAGGGACCCTCATGTGGCGCTCGTCAGGGGAGAAACAGTGAAGTCTGTAGTGGGCCTTCCCCTCCCTGTCTACACCTGAGCACTGCAGGAGATTCTCCCTGATGAGCTGCAACAGGCTGAGCTCCAGAGAGCAGGCTCTGGGCTCCATGCTTCACCGAGTCCCTCAAGCCCCAGGAGGCAAAAGCGAGGTGAAGCTTTGGGTGCTCTGGAAGGGCAGCTGTCTGGGTGGCTTTCCTGTGGCTGCTGTAACTGATCGTTACAAACTTTGTGGCTTAAAACAACACAGTCTCATGATCATACAGCTGTGGAGACCAGAAGTCTGAAATGGGTCTCACTGGGCTGAAATCAAGGTGTTAACAGGGCTGGTTCCTTCTAGAGGCTCCAGCGGAGGGCCTGTTCCCTTGCCTTTTCCAGCTTCTGGAGGCCACCCGTGTTCCTTGGCTCATGGCCCCCTCCTACCCAAAGCCAGCAAAGGTCGGTGGAGTCTCCCACAGAGCATCGCTCCACTGTCTCTCCTGCCTCCCTCTTTCATTTATAAGGACGCTGGTGATTCCACTGGGCTCAGCCAGATGATCCAGGATAATCCACCCTGGGTCACCTGACGAGCAGTCTCAAATCCACCCACTGCCTTAATTCCCCCTTGCATGTAATAAAACATATTCACAGGCTTTGGGGTTATGACATCGTGGGTGGGGTTCACTATTCTGCCTACCACAGTCACAGGCAGGGGTGTGCCCATCGCTCCAACTCTCCAGCCAAGGCTAGGGAAGGGCAGGGCGGGAGAGCGGGAAGCTGGGCCTCTTGCTTTTCTTTCACATTCCCAGCATGGTAGATGGGTGTGGACATCAATCCGAAGCCCACCTCCTTTCGAGGGATCAATAGGATGTCTCATCACCGCGCAAATGCGGCTGCCCCTGTTTAACCCCATCACAGCCTGGTGCTTCAGGATCCCTCAAAGTCCAGGGTCAAGGCCCATTCTCTCCCTGGATCCTGCCTTCCCTGCTCCACCGGCTCCCTTCTCCAGCCCAACTCCGTTCCTTTCAAAGGGTCTTGTTCCCTGGAGCCTGCCAGCACCGATCCTGTGTTCCCTAGGAGTCCGGAAGAGGCGAGGCACTGGGGATGCTTCCTGACCTGGCCTTCGTCTCGCTCCACTGTTTGCAGAGCGGTTGTTCTGCTGAGTGGGGATGGCAGTGCCAGGACTTCTAGCGAGACGGGAGAGGCACAAGGGGAAACTTGGCGGGAAGAGACCAAGGGTGCGGCGGCTCCACGGGGAGTGGAACTTGCAAGAAGAACACAGTGGTTTAAAGGGTATTTTTAGGATGTGCAATATGGCAGGCCTGCTCTCACTCAAGAAAACTCTGAGTTAAATTCACATGACTCATCACTGCTTCCATGCCCTGGGCTGGAGGCCAGCTTCGGGGAGAGAACAGGGATGGCCTGAGGGAAAGGGCCCTGGCACTGGGTGTAGGGGAGTGGATGAGGAATAAGACTGGGGAATCAGACTCTTACACGCTGATGGGGACTCCCCAGAACCCACTCGTTTAGCTAGACCAAATATTAAACATGTGGGTGATATGAGGCAGCAGGTCTCAGATCTGCTGTCATAAAGTGGGTCCAAGCAGGAGGAGACCCCTCCCAGGAGAACCAAATAGATAAATAGCCAGGTTGTTAGAAGTGGGGGAATCTTCCTGTGCTTCAAAGAGGTAATAATAATTAGATTTGAGCTTGAAAGATGGGCAGAAGTGACAAAGGGAGACACAAGGCAGAGAGAGGAGCAGAAGCAGGAATACAGGACACAGCAGACCCTCGAGCTTGGCGGGACACAGGTGAGTAGCAGGGACTGTGGGAAAGAAGACCAAAGGCAGGCCTGGCTGGGTGCAGTGGCTCACGCCTGTCATCTCAGCACTTTGGGAGGCCAAGGCAGGAGGATGGCTTGAGCTCAGTAGTTCAAAATCAGCCTGGGGTATATAGCGAGACGCCATCTCGGCAAATAATGTTAAAGGCTGGGCAGTCACGGCCAAGGGCAGCGAAGGGGCCGGGCCCCAGACTGAGCCTGTGGGAAGGCCACTGGAAGCTCAGCCTCCGGGTGGCATGACTTTGCCCCTTGCATGGGGCTTCCCTGGTTGGGGACCAGGCAGCTGACCAGGGTGGCAGGTGTTGGCTCAGGGAAGAGGCTGCTCACTCTTGGCATCTTGACCCCTTTGTCCAGGATCCTGCTCTGCAACATCCACTTCCTGCTCCCGATCTCCCTGAAGGGGCTGCTGCTCGTGGGCCTGCTCTGCACTGTGCTGCAAGTGAGCAGTGCTAAGGGGGCCTCCAGGGGGAAATAAAGTCACAGCCTGAGCCGGGGAACCGCAGCTCCCACACCATCAACACCCTCGGAGGGGGCAAGCAGAACCTCTGGCCTCCTATCAGGTAATAAGCAGCAATTGCAGTTCCCCAGGAGACAAGGGTCCCTGCAGAGATGAAATATCCCTCATCCTGGCCTCAGGAAGGCAATCCCACTCCCAGCTGGCTCTGCACAGCACAGGGATGCTGACGGGGCCTCTCTGCCTTCTGCCACCTCTGCCTCAGGAGCAGATAAAAGAAAGGACATCCCCCTTGCACACTGATTCCTTGGAGGCATCTGCATCTCACCTTCATGGATCCTCCCTCAGGCCTCCTTTCCTTGTGGCTCCAGGATGACCCTGTCAGAGATACTGGACTATCGTTCAGTTGCAGAGGCCCCAGGGCCTGTCTGGACTTTTCCATCCCAAGAGGGGCTCGGCTCTATCCCCTTTGTGCCTGTGACCCTCTCCATCCCCCACCCGGCTCAGAACTGGCACAGCCACCACCAACCACTCCTGATTCAACCCAAGCTTCGCCCTTTCCACCTCTCGAGCTGTGCAACAACAAATGCAGGATGCTCAGCCCTCATGTGTCAGTCCCCTCAATTCACTTGTAATTAAATAACAACACACCTCTTTTTCTAATTTTCAAAGGTGTATATATTTCCCCTCAATAAAGTTGTTAGGATTA</dnaseq>|
 
sequence = <dnaseq>AACTGTAGTGCTAAGACTAAATGCTTCACGATCCTTGGAGGGGTAAGAGGTGACGTGAGCCACGGGGAAGCCACCTAGGTCACCCTCAAAACTATCCTTTGCATGTCCCACAGCAACTCCAAGAAAACAATCTGAACCTAAGACAACAGACGCAGCTGCACCTGGGACAGCAGACACAGCTGGGCCTGGGACAATGGACACAGCTGTACCTAGAAAAGCAGAAACAGCTGTGCCTGGGAAAAGGAACACAGCTGTGCCTGGAACAGCAGACCCAGCTTCACCTGGGACAGCAGACACAGCAGAACCTATGAGAACAACCACTCCAACAGTTCTGGCCTCCTGGCCTTCTCTCACCCAGAGCACCAACAGCACCCAGCCCACGGCTCTTACCAGCCCCCTCACCAGGTGAGCAGAGCTGGGCTCCCACAGACCTTTCCCTAGGCTGCCCCATGACTGCTCCTTCAGATGCTCTCACCAGGGACCCTCATGTGGCGCTCGTCAGGGGAGAAACAGTGAAGTCTGTAGTGGGCCTTCCCCTCCCTGTCTACACCTGAGCACTGCAGGAGATTCTCCCTGATGAGCTGCAACAGGCTGAGCTCCAGAGAGCAGGCTCTGGGCTCCATGCTTCACCGAGTCCCTCAAGCCCCAGGAGGCAAAAGCGAGGTGAAGCTTTGGGTGCTCTGGAAGGGCAGCTGTCTGGGTGGCTTTCCTGTGGCTGCTGTAACTGATCGTTACAAACTTTGTGGCTTAAAACAACACAGTCTCATGATCATACAGCTGTGGAGACCAGAAGTCTGAAATGGGTCTCACTGGGCTGAAATCAAGGTGTTAACAGGGCTGGTTCCTTCTAGAGGCTCCAGCGGAGGGCCTGTTCCCTTGCCTTTTCCAGCTTCTGGAGGCCACCCGTGTTCCTTGGCTCATGGCCCCCTCCTACCCAAAGCCAGCAAAGGTCGGTGGAGTCTCCCACAGAGCATCGCTCCACTGTCTCTCCTGCCTCCCTCTTTCATTTATAAGGACGCTGGTGATTCCACTGGGCTCAGCCAGATGATCCAGGATAATCCACCCTGGGTCACCTGACGAGCAGTCTCAAATCCACCCACTGCCTTAATTCCCCCTTGCATGTAATAAAACATATTCACAGGCTTTGGGGTTATGACATCGTGGGTGGGGTTCACTATTCTGCCTACCACAGTCACAGGCAGGGGTGTGCCCATCGCTCCAACTCTCCAGCCAAGGCTAGGGAAGGGCAGGGCGGGAGAGCGGGAAGCTGGGCCTCTTGCTTTTCTTTCACATTCCCAGCATGGTAGATGGGTGTGGACATCAATCCGAAGCCCACCTCCTTTCGAGGGATCAATAGGATGTCTCATCACCGCGCAAATGCGGCTGCCCCTGTTTAACCCCATCACAGCCTGGTGCTTCAGGATCCCTCAAAGTCCAGGGTCAAGGCCCATTCTCTCCCTGGATCCTGCCTTCCCTGCTCCACCGGCTCCCTTCTCCAGCCCAACTCCGTTCCTTTCAAAGGGTCTTGTTCCCTGGAGCCTGCCAGCACCGATCCTGTGTTCCCTAGGAGTCCGGAAGAGGCGAGGCACTGGGGATGCTTCCTGACCTGGCCTTCGTCTCGCTCCACTGTTTGCAGAGCGGTTGTTCTGCTGAGTGGGGATGGCAGTGCCAGGACTTCTAGCGAGACGGGAGAGGCACAAGGGGAAACTTGGCGGGAAGAGACCAAGGGTGCGGCGGCTCCACGGGGAGTGGAACTTGCAAGAAGAACACAGTGGTTTAAAGGGTATTTTTAGGATGTGCAATATGGCAGGCCTGCTCTCACTCAAGAAAACTCTGAGTTAAATTCACATGACTCATCACTGCTTCCATGCCCTGGGCTGGAGGCCAGCTTCGGGGAGAGAACAGGGATGGCCTGAGGGAAAGGGCCCTGGCACTGGGTGTAGGGGAGTGGATGAGGAATAAGACTGGGGAATCAGACTCTTACACGCTGATGGGGACTCCCCAGAACCCACTCGTTTAGCTAGACCAAATATTAAACATGTGGGTGATATGAGGCAGCAGGTCTCAGATCTGCTGTCATAAAGTGGGTCCAAGCAGGAGGAGACCCCTCCCAGGAGAACCAAATAGATAAATAGCCAGGTTGTTAGAAGTGGGGGAATCTTCCTGTGCTTCAAAGAGGTAATAATAATTAGATTTGAGCTTGAAAGATGGGCAGAAGTGACAAAGGGAGACACAAGGCAGAGAGAGGAGCAGAAGCAGGAATACAGGACACAGCAGACCCTCGAGCTTGGCGGGACACAGGTGAGTAGCAGGGACTGTGGGAAAGAAGACCAAAGGCAGGCCTGGCTGGGTGCAGTGGCTCACGCCTGTCATCTCAGCACTTTGGGAGGCCAAGGCAGGAGGATGGCTTGAGCTCAGTAGTTCAAAATCAGCCTGGGGTATATAGCGAGACGCCATCTCGGCAAATAATGTTAAAGGCTGGGCAGTCACGGCCAAGGGCAGCGAAGGGGCCGGGCCCCAGACTGAGCCTGTGGGAAGGCCACTGGAAGCTCAGCCTCCGGGTGGCATGACTTTGCCCCTTGCATGGGGCTTCCCTGGTTGGGGACCAGGCAGCTGACCAGGGTGGCAGGTGTTGGCTCAGGGAAGAGGCTGCTCACTCTTGGCATCTTGACCCCTTTGTCCAGGATCCTGCTCTGCAACATCCACTTCCTGCTCCCGATCTCCCTGAAGGGGCTGCTGCTCGTGGGCCTGCTCTGCACTGTGCTGCAAGTGAGCAGTGCTAAGGGGGCCTCCAGGGGGAAATAAAGTCACAGCCTGAGCCGGGGAACCGCAGCTCCCACACCATCAACACCCTCGGAGGGGGCAAGCAGAACCTCTGGCCTCCTATCAGGTAATAAGCAGCAATTGCAGTTCCCCAGGAGACAAGGGTCCCTGCAGAGATGAAATATCCCTCATCCTGGCCTCAGGAAGGCAATCCCACTCCCAGCTGGCTCTGCACAGCACAGGGATGCTGACGGGGCCTCTCTGCCTTCTGCCACCTCTGCCTCAGGAGCAGATAAAAGAAAGGACATCCCCCTTGCACACTGATTCCTTGGAGGCATCTGCATCTCACCTTCATGGATCCTCCCTCAGGCCTCCTTTCCTTGTGGCTCCAGGATGACCCTGTCAGAGATACTGGACTATCGTTCAGTTGCAGAGGCCCCAGGGCCTGTCTGGACTTTTCCATCCCAAGAGGGGCTCGGCTCTATCCCCTTTGTGCCTGTGACCCTCTCCATCCCCCACCCGGCTCAGAACTGGCACAGCCACCACCAACCACTCCTGATTCAACCCAAGCTTCGCCCTTTCCACCTCTCGAGCTGTGCAACAACAAATGCAGGATGCTCAGCCCTCATGTGTCAGTCCCCTCAATTCACTTGTAATTAAATAACAACACACCTCTTTTTCTAATTTTCAAAGGTGTATATATTTCCCCTCAATAAAGTTGTTAGGATTA</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:ENSG00000261222.2]][[Category:lnc-C17orf77-1]]
+
[[Category:Intergenic]][[Category:ENSG00000261222.2]][[Category:lnc-C17orf77-1]][[Category:Transcripts]]

Revision as of 11:26, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000569279.1

Source

Gencode19

Same with

lnc-C17orf77-1:2

Classification

intergenic

Length

3493 nt

Genomic location

chr17+:72599876..72603368

Exon number

1

Exons

72599876..72603368

Genome context

Sequence
000001 AACTGTAGTG CTAAGACTAA ATGCTTCACG ATCCTTGGAG GGGTAAGAGG TGACGTGAGC CACGGGGAAG CCACCTAGGT 000080
000081 CACCCTCAAA ACTATCCTTT GCATGTCCCA CAGCAACTCC AAGAAAACAA TCTGAACCTA AGACAACAGA CGCAGCTGCA 000160
000161 CCTGGGACAG CAGACACAGC TGGGCCTGGG ACAATGGACA CAGCTGTACC TAGAAAAGCA GAAACAGCTG TGCCTGGGAA 000240
000241 AAGGAACACA GCTGTGCCTG GAACAGCAGA CCCAGCTTCA CCTGGGACAG CAGACACAGC AGAACCTATG AGAACAACCA 000320
000321 CTCCAACAGT TCTGGCCTCC TGGCCTTCTC TCACCCAGAG CACCAACAGC ACCCAGCCCA CGGCTCTTAC CAGCCCCCTC 000400
000401 ACCAGGTGAG CAGAGCTGGG CTCCCACAGA CCTTTCCCTA GGCTGCCCCA TGACTGCTCC TTCAGATGCT CTCACCAGGG 000480
000481 ACCCTCATGT GGCGCTCGTC AGGGGAGAAA CAGTGAAGTC TGTAGTGGGC CTTCCCCTCC CTGTCTACAC CTGAGCACTG 000560
000561 CAGGAGATTC TCCCTGATGA GCTGCAACAG GCTGAGCTCC AGAGAGCAGG CTCTGGGCTC CATGCTTCAC CGAGTCCCTC 000640
000641 AAGCCCCAGG AGGCAAAAGC GAGGTGAAGC TTTGGGTGCT CTGGAAGGGC AGCTGTCTGG GTGGCTTTCC TGTGGCTGCT 000720
000721 GTAACTGATC GTTACAAACT TTGTGGCTTA AAACAACACA GTCTCATGAT CATACAGCTG TGGAGACCAG AAGTCTGAAA 000800
000801 TGGGTCTCAC TGGGCTGAAA TCAAGGTGTT AACAGGGCTG GTTCCTTCTA GAGGCTCCAG CGGAGGGCCT GTTCCCTTGC 000880
000881 CTTTTCCAGC TTCTGGAGGC CACCCGTGTT CCTTGGCTCA TGGCCCCCTC CTACCCAAAG CCAGCAAAGG TCGGTGGAGT 000960
000961 CTCCCACAGA GCATCGCTCC ACTGTCTCTC CTGCCTCCCT CTTTCATTTA TAAGGACGCT GGTGATTCCA CTGGGCTCAG 001040
001041 CCAGATGATC CAGGATAATC CACCCTGGGT CACCTGACGA GCAGTCTCAA ATCCACCCAC TGCCTTAATT CCCCCTTGCA 001120
001121 TGTAATAAAA CATATTCACA GGCTTTGGGG TTATGACATC GTGGGTGGGG TTCACTATTC TGCCTACCAC AGTCACAGGC 001200
001201 AGGGGTGTGC CCATCGCTCC AACTCTCCAG CCAAGGCTAG GGAAGGGCAG GGCGGGAGAG CGGGAAGCTG GGCCTCTTGC 001280
001281 TTTTCTTTCA CATTCCCAGC ATGGTAGATG GGTGTGGACA TCAATCCGAA GCCCACCTCC TTTCGAGGGA TCAATAGGAT 001360
001361 GTCTCATCAC CGCGCAAATG CGGCTGCCCC TGTTTAACCC CATCACAGCC TGGTGCTTCA GGATCCCTCA AAGTCCAGGG 001440
001441 TCAAGGCCCA TTCTCTCCCT GGATCCTGCC TTCCCTGCTC CACCGGCTCC CTTCTCCAGC CCAACTCCGT TCCTTTCAAA 001520
001521 GGGTCTTGTT CCCTGGAGCC TGCCAGCACC GATCCTGTGT TCCCTAGGAG TCCGGAAGAG GCGAGGCACT GGGGATGCTT 001600
001601 CCTGACCTGG CCTTCGTCTC GCTCCACTGT TTGCAGAGCG GTTGTTCTGC TGAGTGGGGA TGGCAGTGCC AGGACTTCTA 001680
001681 GCGAGACGGG AGAGGCACAA GGGGAAACTT GGCGGGAAGA GACCAAGGGT GCGGCGGCTC CACGGGGAGT GGAACTTGCA 001760
001761 AGAAGAACAC AGTGGTTTAA AGGGTATTTT TAGGATGTGC AATATGGCAG GCCTGCTCTC ACTCAAGAAA ACTCTGAGTT 001840
001841 AAATTCACAT GACTCATCAC TGCTTCCATG CCCTGGGCTG GAGGCCAGCT TCGGGGAGAG AACAGGGATG GCCTGAGGGA 001920
001921 AAGGGCCCTG GCACTGGGTG TAGGGGAGTG GATGAGGAAT AAGACTGGGG AATCAGACTC TTACACGCTG ATGGGGACTC 002000
002001 CCCAGAACCC ACTCGTTTAG CTAGACCAAA TATTAAACAT GTGGGTGATA TGAGGCAGCA GGTCTCAGAT CTGCTGTCAT 002080
002081 AAAGTGGGTC CAAGCAGGAG GAGACCCCTC CCAGGAGAAC CAAATAGATA AATAGCCAGG TTGTTAGAAG TGGGGGAATC 002160
002161 TTCCTGTGCT TCAAAGAGGT AATAATAATT AGATTTGAGC TTGAAAGATG GGCAGAAGTG ACAAAGGGAG ACACAAGGCA 002240
002241 GAGAGAGGAG CAGAAGCAGG AATACAGGAC ACAGCAGACC CTCGAGCTTG GCGGGACACA GGTGAGTAGC AGGGACTGTG 002320
002321 GGAAAGAAGA CCAAAGGCAG GCCTGGCTGG GTGCAGTGGC TCACGCCTGT CATCTCAGCA CTTTGGGAGG CCAAGGCAGG 002400
002401 AGGATGGCTT GAGCTCAGTA GTTCAAAATC AGCCTGGGGT ATATAGCGAG ACGCCATCTC GGCAAATAAT GTTAAAGGCT 002480
002481 GGGCAGTCAC GGCCAAGGGC AGCGAAGGGG CCGGGCCCCA GACTGAGCCT GTGGGAAGGC CACTGGAAGC TCAGCCTCCG 002560
002561 GGTGGCATGA CTTTGCCCCT TGCATGGGGC TTCCCTGGTT GGGGACCAGG CAGCTGACCA GGGTGGCAGG TGTTGGCTCA 002640
002641 GGGAAGAGGC TGCTCACTCT TGGCATCTTG ACCCCTTTGT CCAGGATCCT GCTCTGCAAC ATCCACTTCC TGCTCCCGAT 002720
002721 CTCCCTGAAG GGGCTGCTGC TCGTGGGCCT GCTCTGCACT GTGCTGCAAG TGAGCAGTGC TAAGGGGGCC TCCAGGGGGA 002800
002801 AATAAAGTCA CAGCCTGAGC CGGGGAACCG CAGCTCCCAC ACCATCAACA CCCTCGGAGG GGGCAAGCAG AACCTCTGGC 002880
002881 CTCCTATCAG GTAATAAGCA GCAATTGCAG TTCCCCAGGA GACAAGGGTC CCTGCAGAGA TGAAATATCC CTCATCCTGG 002960
002961 CCTCAGGAAG GCAATCCCAC TCCCAGCTGG CTCTGCACAG CACAGGGATG CTGACGGGGC CTCTCTGCCT TCTGCCACCT 003040
003041 CTGCCTCAGG AGCAGATAAA AGAAAGGACA TCCCCCTTGC ACACTGATTC CTTGGAGGCA TCTGCATCTC ACCTTCATGG 003120
003121 ATCCTCCCTC AGGCCTCCTT TCCTTGTGGC TCCAGGATGA CCCTGTCAGA GATACTGGAC TATCGTTCAG TTGCAGAGGC 003200
003201 CCCAGGGCCT GTCTGGACTT TTCCATCCCA AGAGGGGCTC GGCTCTATCC CCTTTGTGCC TGTGACCCTC TCCATCCCCC 003280
003281 ACCCGGCTCA GAACTGGCAC AGCCACCACC AACCACTCCT GATTCAACCC AAGCTTCGCC CTTTCCACCT CTCGAGCTGT 003360
003361 GCAACAACAA ATGCAGGATG CTCAGCCCTC ATGTGTCAGT CCCCTCAATT CACTTGTAAT TAAATAACAA CACACCTCT