Difference between revisions of "Lnc-AC092329.1-1:1"

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sequence = <dnaseq>TTTGTATCTCACTCCCGCCACAGCTTGGGATCGGTCTCTGCTGTTTTACGTCCTCCACCTCGGGAGCCCCCGGTGACTGTCACAGCCTCTTGCCCTGTGATCTGCAGGTTCTGGGAGACGCACAGCTAAGATGCCAGGACATCCTGGAAGCTGGGAAAAGGTTCTGACAACAAAGGAGATTGTGACATATTGCTGGGCCTAACACTAAGGTGATGTTAGTTATTTGCTTTGGCTGTGCCCTTGGAAGGCATTGAGACATACTGCTGTGCCCAGCACCAAGATGATGTAACGTGACTCTTCTGCTTCAGGCCTGCCAAAAGAAAAGATTGTGACAGATCACTGGACCCAGCACCTAGGAGGGATTGTAACATCCCTGGTCAAGCCCCCAGTGATGTGATTCTCCTGTTTGATGCCTGCCCTCAGGGAGGATTGTGACATAGCCCTGGCCCAACACACAGTTCATGTAACTCTTGAATTTGCTCTTTACATACAGGTAGGATTGTGACATATATCTGGCCAAGCGTACAGATGTAATGATGACTGTCATACCTTGAAGAAGCCAATAGCAGAGAGAATGTTGCTCTCAGGCTTAGGAAAATGAGGAAGTCTTTCTGTACAAAAGTCATAAAGAATTACTACTCTCTCACATATATTACGCCCTAGTGTGTTACAGAGAATGTCATAACAGGGCCCAGCACACAAGTGAGATTGTGTTTGTCCTATGCACACTACACCAACCTTTACAGTTGTCACCCTGACCCATTGACAGAGTCTGCTAGTGAGGTTCTGAATTACATGTGAACACAGTCCGCAGTTGGAATTGTGACTGTCATATGTGAACATCTGGCTACAGTTGGGATGGTGACTCATTTCTAAATCCAGCTCATAGGAAGGTGAAGACTCTCCTATCTGGACTCAGTTGGTGAGAGAGATGTTGACTCTCATATCTGGGCTTAGAACCACAGGAAAGATTCTGGAGCTCCTTGTGCAAAGGTCATAGAGGATTATCAATCTTGCATATTGTATAAAGTCCTCAGGTGACACAGAGTGTCTCTCGAATGCACACCCAGGCAACAGTAAAGATTGTCATTCTCCCACATAAACACATCCCACTGTTGAAGTTCTGAATTTCACAGAGGCTGTCAAAAGTTGGATAATTGCCTCTCATGTGTGGATCTGGTCCACAGGTGGGTTAGTGACTTCCAGACCAAGGTTCAGCGCACATGTAAGGCTGTGACTACACTAAGAAGATACAGTCTGCAGAAGAAACTGTGGCTCTTTTGCACACATTCTGTCAATCATTGTGATTGCGACTCATGTACTTAGACCCAACATACAGGAGGTGTTGACTTTCATACCTTTAGAACCTGGACATGTTTGGAATTTCTAATCTAATCCCTGGACTTTCCTGCAGGTGTGATTGTGTGCATTGCAAAGCACCTTAGTGATTTGACTCTCCTGCCTTGGCCAAGCACACAAATGAGATTGTGACATATGGCTTGACTCTGAACCTCCAAGATGTGACTCTTTTTTCCAGCCTTGGAGCTGCCCACATGTTGCATTGTGACATATTCCTAAGCCCTGCACTCAGGTTATGTGACTCTCCTTTTTTGCTTAGGCCCTGAATATTTTTCATGTTAAGACATATTACTAGGTCCAACACCTATAAAATGGGAGACTACCACCTGGGCTCTTTCTACAGAGGGCCTTGTGACATACCTCTGCATCAATAACCTAGGAGATGTGATGCTCCATTTTTGCCTGTACGTGCCCCACAGAAAAAATTGTGGCTGGCCCAGGTACCAGGTGATGTGTCTCTGCTGCCTGGGCCTGGACCACAGAGAGCATTGTTACTGATTGCTGGGCTCAGCACCCAGGTGATGTGACTCTGCTGCCTGTGTGCTGCTTTCAGGAGAAGGTTGTAACTTATTCCTGGCTGAGTATGCAGTCACACTCCTGACTGATCTCTGCCCTCAGAAAAGGTTGTGTCAAGCCGGGCCCGGTGGCTCATGCCAGTAATCCCCAGCACTTAGGGAGACCGAGGTGGGTGGATCGCCTGAGGAGTTTGAGACCAGATGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAATCGGGTGTGGTGGCGGGCACCTGTAAACTCAGCTATTCGGGAGCCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGTGGAGGTTGCAGTGAGCCAAGATCATGCCACTGCACTCCAGCCTGGGCAGCAGAGCAAGATTCCATCTTGGGAAAAAAATTACAAAAATTAGCCAGGCGTGGTGGTATGCACCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCACAGCAGTCACTTGAACTTAGGAGGCGGAGGTTGCAGTGAGCCAAGACTGTGCCATTGCACTCC</dnaseq>|
 
sequence = <dnaseq>TTTGTATCTCACTCCCGCCACAGCTTGGGATCGGTCTCTGCTGTTTTACGTCCTCCACCTCGGGAGCCCCCGGTGACTGTCACAGCCTCTTGCCCTGTGATCTGCAGGTTCTGGGAGACGCACAGCTAAGATGCCAGGACATCCTGGAAGCTGGGAAAAGGTTCTGACAACAAAGGAGATTGTGACATATTGCTGGGCCTAACACTAAGGTGATGTTAGTTATTTGCTTTGGCTGTGCCCTTGGAAGGCATTGAGACATACTGCTGTGCCCAGCACCAAGATGATGTAACGTGACTCTTCTGCTTCAGGCCTGCCAAAAGAAAAGATTGTGACAGATCACTGGACCCAGCACCTAGGAGGGATTGTAACATCCCTGGTCAAGCCCCCAGTGATGTGATTCTCCTGTTTGATGCCTGCCCTCAGGGAGGATTGTGACATAGCCCTGGCCCAACACACAGTTCATGTAACTCTTGAATTTGCTCTTTACATACAGGTAGGATTGTGACATATATCTGGCCAAGCGTACAGATGTAATGATGACTGTCATACCTTGAAGAAGCCAATAGCAGAGAGAATGTTGCTCTCAGGCTTAGGAAAATGAGGAAGTCTTTCTGTACAAAAGTCATAAAGAATTACTACTCTCTCACATATATTACGCCCTAGTGTGTTACAGAGAATGTCATAACAGGGCCCAGCACACAAGTGAGATTGTGTTTGTCCTATGCACACTACACCAACCTTTACAGTTGTCACCCTGACCCATTGACAGAGTCTGCTAGTGAGGTTCTGAATTACATGTGAACACAGTCCGCAGTTGGAATTGTGACTGTCATATGTGAACATCTGGCTACAGTTGGGATGGTGACTCATTTCTAAATCCAGCTCATAGGAAGGTGAAGACTCTCCTATCTGGACTCAGTTGGTGAGAGAGATGTTGACTCTCATATCTGGGCTTAGAACCACAGGAAAGATTCTGGAGCTCCTTGTGCAAAGGTCATAGAGGATTATCAATCTTGCATATTGTATAAAGTCCTCAGGTGACACAGAGTGTCTCTCGAATGCACACCCAGGCAACAGTAAAGATTGTCATTCTCCCACATAAACACATCCCACTGTTGAAGTTCTGAATTTCACAGAGGCTGTCAAAAGTTGGATAATTGCCTCTCATGTGTGGATCTGGTCCACAGGTGGGTTAGTGACTTCCAGACCAAGGTTCAGCGCACATGTAAGGCTGTGACTACACTAAGAAGATACAGTCTGCAGAAGAAACTGTGGCTCTTTTGCACACATTCTGTCAATCATTGTGATTGCGACTCATGTACTTAGACCCAACATACAGGAGGTGTTGACTTTCATACCTTTAGAACCTGGACATGTTTGGAATTTCTAATCTAATCCCTGGACTTTCCTGCAGGTGTGATTGTGTGCATTGCAAAGCACCTTAGTGATTTGACTCTCCTGCCTTGGCCAAGCACACAAATGAGATTGTGACATATGGCTTGACTCTGAACCTCCAAGATGTGACTCTTTTTTCCAGCCTTGGAGCTGCCCACATGTTGCATTGTGACATATTCCTAAGCCCTGCACTCAGGTTATGTGACTCTCCTTTTTTGCTTAGGCCCTGAATATTTTTCATGTTAAGACATATTACTAGGTCCAACACCTATAAAATGGGAGACTACCACCTGGGCTCTTTCTACAGAGGGCCTTGTGACATACCTCTGCATCAATAACCTAGGAGATGTGATGCTCCATTTTTGCCTGTACGTGCCCCACAGAAAAAATTGTGGCTGGCCCAGGTACCAGGTGATGTGTCTCTGCTGCCTGGGCCTGGACCACAGAGAGCATTGTTACTGATTGCTGGGCTCAGCACCCAGGTGATGTGACTCTGCTGCCTGTGTGCTGCTTTCAGGAGAAGGTTGTAACTTATTCCTGGCTGAGTATGCAGTCACACTCCTGACTGATCTCTGCCCTCAGAAAAGGTTGTGTCAAGCCGGGCCCGGTGGCTCATGCCAGTAATCCCCAGCACTTAGGGAGACCGAGGTGGGTGGATCGCCTGAGGAGTTTGAGACCAGATGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAATCGGGTGTGGTGGCGGGCACCTGTAAACTCAGCTATTCGGGAGCCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGTGGAGGTTGCAGTGAGCCAAGATCATGCCACTGCACTCCAGCCTGGGCAGCAGAGCAAGATTCCATCTTGGGAAAAAAATTACAAAAATTAGCCAGGCGTGGTGGTATGCACCTGTAGTCCCAGCTACTTGAGAGGCTGAGGCACAGCAGTCACTTGAACTTAGGAGGCGGAGGTTGCAGTGAGCCAAGACTGTGCCATTGCACTCC</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:lnc-AC092329.1-1]]
+
[[Category:Intergenic]][[Category:lnc-AC092329.1-1]][[Category:NONHSAG025343]]

Revision as of 14:30, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-AC092329.1-1:1

Source

LNCipedia2.1

Same with

NONHSAT063871

Classification

intergenic

Length

2406 nt

Genomic location

chr19-:23441006..23457037

Exon number

4

Exons

23441006..23443055,23443666..23443736,23444422..23444546,23456878..23457037

Genome context

Sequence
000001 TTTGTATCTC ACTCCCGCCA CAGCTTGGGA TCGGTCTCTG CTGTTTTACG TCCTCCACCT CGGGAGCCCC CGGTGACTGT 000080
000081 CACAGCCTCT TGCCCTGTGA TCTGCAGGTT CTGGGAGACG CACAGCTAAG ATGCCAGGAC ATCCTGGAAG CTGGGAAAAG 000160
000161 GTTCTGACAA CAAAGGAGAT TGTGACATAT TGCTGGGCCT AACACTAAGG TGATGTTAGT TATTTGCTTT GGCTGTGCCC 000240
000241 TTGGAAGGCA TTGAGACATA CTGCTGTGCC CAGCACCAAG ATGATGTAAC GTGACTCTTC TGCTTCAGGC CTGCCAAAAG 000320
000321 AAAAGATTGT GACAGATCAC TGGACCCAGC ACCTAGGAGG GATTGTAACA TCCCTGGTCA AGCCCCCAGT GATGTGATTC 000400
000401 TCCTGTTTGA TGCCTGCCCT CAGGGAGGAT TGTGACATAG CCCTGGCCCA ACACACAGTT CATGTAACTC TTGAATTTGC 000480
000481 TCTTTACATA CAGGTAGGAT TGTGACATAT ATCTGGCCAA GCGTACAGAT GTAATGATGA CTGTCATACC TTGAAGAAGC 000560
000561 CAATAGCAGA GAGAATGTTG CTCTCAGGCT TAGGAAAATG AGGAAGTCTT TCTGTACAAA AGTCATAAAG AATTACTACT 000640
000641 CTCTCACATA TATTACGCCC TAGTGTGTTA CAGAGAATGT CATAACAGGG CCCAGCACAC AAGTGAGATT GTGTTTGTCC 000720
000721 TATGCACACT ACACCAACCT TTACAGTTGT CACCCTGACC CATTGACAGA GTCTGCTAGT GAGGTTCTGA ATTACATGTG 000800
000801 AACACAGTCC GCAGTTGGAA TTGTGACTGT CATATGTGAA CATCTGGCTA CAGTTGGGAT GGTGACTCAT TTCTAAATCC 000880
000881 AGCTCATAGG AAGGTGAAGA CTCTCCTATC TGGACTCAGT TGGTGAGAGA GATGTTGACT CTCATATCTG GGCTTAGAAC 000960
000961 CACAGGAAAG ATTCTGGAGC TCCTTGTGCA AAGGTCATAG AGGATTATCA ATCTTGCATA TTGTATAAAG TCCTCAGGTG 001040
001041 ACACAGAGTG TCTCTCGAAT GCACACCCAG GCAACAGTAA AGATTGTCAT TCTCCCACAT AAACACATCC CACTGTTGAA 001120
001121 GTTCTGAATT TCACAGAGGC TGTCAAAAGT TGGATAATTG CCTCTCATGT GTGGATCTGG TCCACAGGTG GGTTAGTGAC 001200
001201 TTCCAGACCA AGGTTCAGCG CACATGTAAG GCTGTGACTA CACTAAGAAG ATACAGTCTG CAGAAGAAAC TGTGGCTCTT 001280
001281 TTGCACACAT TCTGTCAATC ATTGTGATTG CGACTCATGT ACTTAGACCC AACATACAGG AGGTGTTGAC TTTCATACCT 001360
001361 TTAGAACCTG GACATGTTTG GAATTTCTAA TCTAATCCCT GGACTTTCCT GCAGGTGTGA TTGTGTGCAT TGCAAAGCAC 001440
001441 CTTAGTGATT TGACTCTCCT GCCTTGGCCA AGCACACAAA TGAGATTGTG ACATATGGCT TGACTCTGAA CCTCCAAGAT 001520
001521 GTGACTCTTT TTTCCAGCCT TGGAGCTGCC CACATGTTGC ATTGTGACAT ATTCCTAAGC CCTGCACTCA GGTTATGTGA 001600
001601 CTCTCCTTTT TTGCTTAGGC CCTGAATATT TTTCATGTTA AGACATATTA CTAGGTCCAA CACCTATAAA ATGGGAGACT 001680
001681 ACCACCTGGG CTCTTTCTAC AGAGGGCCTT GTGACATACC TCTGCATCAA TAACCTAGGA GATGTGATGC TCCATTTTTG 001760
001761 CCTGTACGTG CCCCACAGAA AAAATTGTGG CTGGCCCAGG TACCAGGTGA TGTGTCTCTG CTGCCTGGGC CTGGACCACA 001840
001841 GAGAGCATTG TTACTGATTG CTGGGCTCAG CACCCAGGTG ATGTGACTCT GCTGCCTGTG TGCTGCTTTC AGGAGAAGGT 001920
001921 TGTAACTTAT TCCTGGCTGA GTATGCAGTC ACACTCCTGA CTGATCTCTG CCCTCAGAAA AGGTTGTGTC AAGCCGGGCC 002000
002001 CGGTGGCTCA TGCCAGTAAT CCCCAGCACT TAGGGAGACC GAGGTGGGTG GATCGCCTGA GGAGTTTGAG ACCAGATGGC 002080
002081 CAACATGGTG AAACCCCGTC TCTACTAAAA ATACAAAAAT TAATCGGGTG TGGTGGCGGG CACCTGTAAA CTCAGCTATT 002160
002161 CGGGAGCCTG AGGCAGGAGA ATTGCTTGAA CCCGGGAGGT GGAGGTTGCA GTGAGCCAAG ATCATGCCAC TGCACTCCAG 002240
002241 CCTGGGCAGC AGAGCAAGAT TCCATCTTGG GAAAAAAATT ACAAAAATTA GCCAGGCGTG GTGGTATGCA CCTGTAGTCC 002320
002321 CAGCTACTTG AGAGGCTGAG GCACAGCAGT CACTTGAACT TAGGAGGCGG AGGTTGCAGT GAGCCAAGAC TGTGCCATTG 002400
002401 CACTCC
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