Difference between revisions of "Lnc-DLX5-2:4"

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sequence = <dnaseq>GAAAGAGCTTCTGCCCTGAGACTCAGAAAAATATTCTCCTGTGCTTTGGTTCAGTATAGATTTCTAAACCCTGATCATTGCTTAAGAGATATTCACTGAGGGTCCTACGTCTCTGCAATTTGTGTATGAATAACAGAATAATTTCCCTCTTTTGTTTCGCCTTTCCTGTTCCTGAATCTAAATAAAGATGGCTTTTTAGTATTAAAAGTGGAAGAAAATTACAGGTAATTATCTTTGACGGTAAAAACGCTGTAATCAGCGGGCTACATGAAAAATTACTCTAATTATGGCTGCATTTAAGAGAATGGAAAAAAACCTTCTTGTGGATAAAAACCTTAAATTGTCCCCAATGTCTGCTTCAAATTGGATGGCACTGCAGCTGGAGGCTTTGTTCAGAATTGATCCTGGGGAGCTACGAACCCAAAGTTTCACAGTAGGAAGGGGGAAAAAAGAAAAGAAAACATTTTTCCTAATGTAACAATGCGAATGCTAGAAAATGACAAGACTGATCGGTTTTAAACCATTCTGAAGACTGACTGAGCGTGGAAGTTGCTCAACAAAAAAAGGAACGGGTATATTGACAGAGTCTTGCTCTATTGCCCAGGCTGCAACTGGTGTGATCTCGGCTCACTACAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAAGCTCCCAAGTAGCTGGGATTACAAGCATGCACCACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACGGGGTTTCGCCACATTGGCCAGGGTGGTCTTGAACTCCTGACCTCAAGTGATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTATAAGCATGAGCCACTGCACCCAGCCTTATACTGAACTTTCAATGGGTTCAATTCCACTAGGAGCATAAAGGCCACTGCATATGAGTTGTGGAAAGAAGAGATTAGAAGAAGGAAGAACTTGAGATGAGTTCCTCCCTTCAACATTCTGTCTCCTCCTACCTAGCATCTTCTTTCTTTTAGTCTTTCTAGAATGTCCATCTGTTTTTGGCCATTGCGGAGAGAGAAGCTGAGCTTTAAAGGAGTAGGAGCTTCAAAGGCGTAGGAGCTTCAAAATTCTTGTTTCTTCATGTTTGATCACCCTTCTAAACCTGTCTTCTGTTCCTTCTGCTATTCTTTTTTCTTAGAGCATAGGAAAGGGGAGCTTTTAAATTAATACTTAAAGCATGGAAAAAAAGAACTTGAGAAGAAAGTAAAACAAGGGAGATGAGGCTAGTAAAGTAAGGAAAATGAAGAGGAAGAGGAGGAAGGGTTAGCTTCTAAATTCCAAGTCAAATTGATATGGAACAGGCAAGCCGCTTGTCTTACTTAAACTTCAGAAAAGGATCTGCTGAAACTTGATAGAAATGGAAAGGGAAATCCTTGGGGTGGGGAACCTCCAAACATTAGTAATGATATTGAACAACTCAAAGTATTGAGGAAATCTGCAGGCTACATGCCTGAAGATTACCCATGCAGATAGACCAAAAGGATTAGAATTATCTGTTGATATTAGTAATATTTATTGACATCTAGCTAGTATTGGTAATTTTAAGTTTTAGATTAATTTCTTTGGTAATAGCTATGATATATTTTATAGACAAGAATTATATCTATAGGCTTGCTATCATAGGCTCTTTTAATCAGCATTAATTTAGTCTACTGATTTTTAGCACAT</dnaseq>|
 
sequence = <dnaseq>GAAAGAGCTTCTGCCCTGAGACTCAGAAAAATATTCTCCTGTGCTTTGGTTCAGTATAGATTTCTAAACCCTGATCATTGCTTAAGAGATATTCACTGAGGGTCCTACGTCTCTGCAATTTGTGTATGAATAACAGAATAATTTCCCTCTTTTGTTTCGCCTTTCCTGTTCCTGAATCTAAATAAAGATGGCTTTTTAGTATTAAAAGTGGAAGAAAATTACAGGTAATTATCTTTGACGGTAAAAACGCTGTAATCAGCGGGCTACATGAAAAATTACTCTAATTATGGCTGCATTTAAGAGAATGGAAAAAAACCTTCTTGTGGATAAAAACCTTAAATTGTCCCCAATGTCTGCTTCAAATTGGATGGCACTGCAGCTGGAGGCTTTGTTCAGAATTGATCCTGGGGAGCTACGAACCCAAAGTTTCACAGTAGGAAGGGGGAAAAAAGAAAAGAAAACATTTTTCCTAATGTAACAATGCGAATGCTAGAAAATGACAAGACTGATCGGTTTTAAACCATTCTGAAGACTGACTGAGCGTGGAAGTTGCTCAACAAAAAAAGGAACGGGTATATTGACAGAGTCTTGCTCTATTGCCCAGGCTGCAACTGGTGTGATCTCGGCTCACTACAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAAGCTCCCAAGTAGCTGGGATTACAAGCATGCACCACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACGGGGTTTCGCCACATTGGCCAGGGTGGTCTTGAACTCCTGACCTCAAGTGATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTATAAGCATGAGCCACTGCACCCAGCCTTATACTGAACTTTCAATGGGTTCAATTCCACTAGGAGCATAAAGGCCACTGCATATGAGTTGTGGAAAGAAGAGATTAGAAGAAGGAAGAACTTGAGATGAGTTCCTCCCTTCAACATTCTGTCTCCTCCTACCTAGCATCTTCTTTCTTTTAGTCTTTCTAGAATGTCCATCTGTTTTTGGCCATTGCGGAGAGAGAAGCTGAGCTTTAAAGGAGTAGGAGCTTCAAAGGCGTAGGAGCTTCAAAATTCTTGTTTCTTCATGTTTGATCACCCTTCTAAACCTGTCTTCTGTTCCTTCTGCTATTCTTTTTTCTTAGAGCATAGGAAAGGGGAGCTTTTAAATTAATACTTAAAGCATGGAAAAAAAGAACTTGAGAAGAAAGTAAAACAAGGGAGATGAGGCTAGTAAAGTAAGGAAAATGAAGAGGAAGAGGAGGAAGGGTTAGCTTCTAAATTCCAAGTCAAATTGATATGGAACAGGCAAGCCGCTTGTCTTACTTAAACTTCAGAAAAGGATCTGCTGAAACTTGATAGAAATGGAAAGGGAAATCCTTGGGGTGGGGAACCTCCAAACATTAGTAATGATATTGAACAACTCAAAGTATTGAGGAAATCTGCAGGCTACATGCCTGAAGATTACCCATGCAGATAGACCAAAAGGATTAGAATTATCTGTTGATATTAGTAATATTTATTGACATCTAGCTAGTATTGGTAATTTTAAGTTTTAGATTAATTTCTTTGGTAATAGCTATGATATATTTTATAGACAAGAATTATATCTATAGGCTTGCTATCATAGGCTCTTTTAATCAGCATTAATTTAGTCTACTGATTTTTAGCACAT</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:lnc-DLX5-2]]
+
[[Category:Intergenic]][[Category:lnc-DLX5-2]][[Category:NONHSAG048268]]

Revision as of 14:31, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-DLX5-2:4

Source

LNCipedia2.1

Same with

NONHSAT122133

Classification

intergenic

Length

1704 nt

Genomic location

chr7-:96607780..96643337

Exon number

3

Exons

96607780..96608903,96641137..96641615,96643237..96643337

Genome context

Sequence
000001 GAAAGAGCTT CTGCCCTGAG ACTCAGAAAA ATATTCTCCT GTGCTTTGGT TCAGTATAGA TTTCTAAACC CTGATCATTG 000080
000081 CTTAAGAGAT ATTCACTGAG GGTCCTACGT CTCTGCAATT TGTGTATGAA TAACAGAATA ATTTCCCTCT TTTGTTTCGC 000160
000161 CTTTCCTGTT CCTGAATCTA AATAAAGATG GCTTTTTAGT ATTAAAAGTG GAAGAAAATT ACAGGTAATT ATCTTTGACG 000240
000241 GTAAAAACGC TGTAATCAGC GGGCTACATG AAAAATTACT CTAATTATGG CTGCATTTAA GAGAATGGAA AAAAACCTTC 000320
000321 TTGTGGATAA AAACCTTAAA TTGTCCCCAA TGTCTGCTTC AAATTGGATG GCACTGCAGC TGGAGGCTTT GTTCAGAATT 000400
000401 GATCCTGGGG AGCTACGAAC CCAAAGTTTC ACAGTAGGAA GGGGGAAAAA AGAAAAGAAA ACATTTTTCC TAATGTAACA 000480
000481 ATGCGAATGC TAGAAAATGA CAAGACTGAT CGGTTTTAAA CCATTCTGAA GACTGACTGA GCGTGGAAGT TGCTCAACAA 000560
000561 AAAAAGGAAC GGGTATATTG ACAGAGTCTT GCTCTATTGC CCAGGCTGCA ACTGGTGTGA TCTCGGCTCA CTACAACCTC 000640
000641 TGCCTCCTGG GTTCAAGCGA TTCTCCTGCC TCAAGCTCCC AAGTAGCTGG GATTACAAGC ATGCACCACC ATGCCTGGCT 000720
000721 AATTTTTGTA TTTTTAGTGG AGACGGGGTT TCGCCACATT GGCCAGGGTG GTCTTGAACT CCTGACCTCA AGTGATCCAC 000800
000801 CTGCCTTGGC CTCCCAAAGT GCTGGGATTA TAAGCATGAG CCACTGCACC CAGCCTTATA CTGAACTTTC AATGGGTTCA 000880
000881 ATTCCACTAG GAGCATAAAG GCCACTGCAT ATGAGTTGTG GAAAGAAGAG ATTAGAAGAA GGAAGAACTT GAGATGAGTT 000960
000961 CCTCCCTTCA ACATTCTGTC TCCTCCTACC TAGCATCTTC TTTCTTTTAG TCTTTCTAGA ATGTCCATCT GTTTTTGGCC 001040
001041 ATTGCGGAGA GAGAAGCTGA GCTTTAAAGG AGTAGGAGCT TCAAAGGCGT AGGAGCTTCA AAATTCTTGT TTCTTCATGT 001120
001121 TTGATCACCC TTCTAAACCT GTCTTCTGTT CCTTCTGCTA TTCTTTTTTC TTAGAGCATA GGAAAGGGGA GCTTTTAAAT 001200
001201 TAATACTTAA AGCATGGAAA AAAAGAACTT GAGAAGAAAG TAAAACAAGG GAGATGAGGC TAGTAAAGTA AGGAAAATGA 001280
001281 AGAGGAAGAG GAGGAAGGGT TAGCTTCTAA ATTCCAAGTC AAATTGATAT GGAACAGGCA AGCCGCTTGT CTTACTTAAA 001360
001361 CTTCAGAAAA GGATCTGCTG AAACTTGATA GAAATGGAAA GGGAAATCCT TGGGGTGGGG AACCTCCAAA CATTAGTAAT 001440
001441 GATATTGAAC AACTCAAAGT ATTGAGGAAA TCTGCAGGCT ACATGCCTGA AGATTACCCA TGCAGATAGA CCAAAAGGAT 001520
001521 TAGAATTATC TGTTGATATT AGTAATATTT ATTGACATCT AGCTAGTATT GGTAATTTTA AGTTTTAGAT TAATTTCTTT 001600
001601 GGTAATAGCT ATGATATATT TTATAGACAA GAATTATATC TATAGGCTTG CTATCATAGG CTCTTTTAAT CAGCATTAAT 001680
001681 TTAGTCTACT GATTTTTAGC ACAT
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