Difference between revisions of "ENST00000551334.1"
Line 42: | Line 42: | ||
sequence = <dnaseq>CTGCAGCAGCAGCGGCGTGGTCAGAGCGAGCTTCGGAGAAGCAGTGGTGGGTTCCATGTGATGGTGGAGTAGGAGGCAGGTCTCCGCGGTCATTTACCATGCTGTCCTCCAGGTTCAACAGTATGGCTCCAAAGGATGAAATTTCATTCTGATTTTCTGGCTGAAGACTATTCTCTTTGTGTATGTCCACCACAGTTACTTTATCCCTTCATCTGTGGATGGGCAGTCTCGCTGTATTGCCCAGGCTGGAGTGCAGTGGCATGATCTCAGCTCACTGCAAGCTCTGCTTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCGCCACCACGCCCAGGAAAGAAAAAAGAAGAAAACAAACCTCCATACGAGAATGGGTCTAAAGGAACTTCCCAAACCTCCATGATTTTGCAGGAAACAAGATAAAGCTGGTTGGTGGAGAATTTGAACTGGAGATGAACTTTATTATCCAGGATGCTGAGAGTATAATACGCATGACAGAGCTTTTAGAGCACTGTGATGTAACATGTCAAGCAGAAATAGGGAGCATGTTTACAGCCATTCTATGAAAAAGTGTTTGGAATGTACAGACTAGCACAGAAGTTGGGCTAATTAAACAAGTATTGCTGAAAATGAGTGCTGTAGATGACATGAGAGCAGGTATGGGGTTGTCTGTTAGGAAAGTATAACTTAAAAGTTTATAAAGTTTCACATACTTCTCTTTATATTCTATAGGTAATGTAGATTTGTTGACACTACTTTGATTTAAAATAAATGGAAATGTATGGAAATTTTACTTTTTATATTAATGGAAAACCTGAAGAGTGAAAGAAGAAAAATATACTTACTATAGTAGACAAATATAATTACTAATGTTGTTTTCTAAATTTTAGAAAATCTCAGTACCACGGAGTGCTATGAAATCTATCAGAAAAATAAACAGTATCTTTTTATGTAGTATTTCATTAAGCTTTTACATAATTAAAATGCCACAATAGGTATTACAGTTCTGTATAATGAGCATTTTATCAAATTCCCCTAGTTCTGTGCCCCTCAATCTGGCATATATGCAACTATGACAGGAGGTACTAAAAGCCTTAGATAAGCATGGTGTATCTTTTTTTTTTCCCACGTATATTTTTTGTTGTTTTTTGTTTTTTTCTGTTATATGTCCTGGTTCTTCCATAACTTATAAACTTGATTTATACCGAGGAGGTGGGAAAGTGGGCGGGGCAGGGTGGACTGACCCGGGATGGGGAAGCTCCTCTCGCTGCCCCCTCGGGGCGGGCCTAGGCCCTTTGGAGGATGGGGACGCCAGGACACTCCTCCCTGAGGTCGTCTGGCCGCCTCTGCCCCTAGTGCTCAGAATCCTGTGTGCCCCTCAATTCCGGAATCCCTCCTGGGACCCCATGCCCACTGGGCACACTGCCCCTGGTACTCAGAATCCCGAAGCACCATTCGGTTCCAGAATCCCCTCCTCAGCTGCTGGGGTGGCGGGGTCCCTCCTTTCCGATGTCCCCCCCAACCCCTGAGGGGGGAGGGAAGGGAGGGGGGTCAGGTCTCCCCTCTGTGGCAGGGGGAGGTGGAGGTGGAGGTGGAATCGGAAGGGCGTGGAAGGCGGGGGCCAGGAGGGCTCAGCCGATGGTGAGTCCAGAGCCACACTGGAACTTGTTCTTGCGGTGATTCAGGAAGGCCCCAAGGGCCAGCGTCAGGGGCAGGAGCTGGAGCTTCTTCTCCAGCGTGGCACCCACGATCCAGTTGCTATCCACAGAGCCTTTGAAGAGGAGGTTGGCCTTGGGCAGGTCCAGCTGGTACCCGAAGGAGACGCTGGTATCCTGCATCCTTGTGCTGGCCTGAAAATCCACACCCACCTGCAACTGGTCACTGGCTTTGTGGTAGTATGTTGCGTCCATGCCCGCCTGGCTCAACGTTACCGTTGCCAACCAGTTGTTCAATGTGTATTTCTCAGCTAGAGACATGACAGTGCCCTCGTCCCCAGGCCGCCGGTTGTAGACCAGCTCTCCGCCCAGGGCCAGGCAAGGCCTGATGCTCTGGAGGTAGTGGGCTTCGAGAATTCTTGAACCCACGAGGACGTCTGGGATCCCCAGGGTGACGGCTGCGGTGAGTCAGAGCCCCGATACTCCCCGTCCACCTGCCAGTTCACAAACTTCGACTGCTGGGTCTGGATGGCCATCTTGGACCTGAGACCGGGGCCCAGCTGGTGAATGACCTGAGCGTGGAGACTGCCGCTGTTGTCCATGTCACCTACCAGTACAGGGAACGCCTCTGTGGGACTCAGCTGCTTTGTCCCCACATACGTGACCCCGAAGTGGTAGCTGGACTCCCCGATTGCGCTGAGGGCTACTGTGTGGTTCACCTGGAAACGGTTACTCAACCCTTTGTTGACTGTGAGCTTGACACCCTCCATCTGAATGGGAAACAGCTCCTTACACCTCCGGTGGCACTCCTGGAATGTGCCCGGGTTGGGCAGGCAGCCGCAGGCCCCATCCTCAGCGGCCCCTGAGGCGCTGGCGGTTGCAGCCCCGGGGGTCCGTTCCGAACCTCGACTCCTAGTGGTGCCGGCGCCCAGGCCGCCTCTCAGCGGCGGCAGCGTGAAGCCTGGCGGCGAGGGCGGAGGTGGCGGCCCTGCGGGCGGCGAGCTGGCGGCCAACATGTTCCCCATGGTCGCTGGCGGTGGCGCCTGCTCCCGGCCTGGTCTCCGCTCCCACCCGGTGCGCCACGCGCAACCGAACTCGCTGCCGCCGCCGCCACCCCCGTCGCCAGCATGGTGTATCTTTTGGACATGTCCATTTTGGAAGAAACTTTTGTGTTAAAATAAACTAATATATTATGGGCTAGAACATAAAATTCACCAAGAATTTCAAGATAAAAATACTAATGTTTTGCTTGTTTGGGTTATTTCAAACAATAACTTTGAAATCTATAATTTTTTCACCACCGACCCTCTACCTCCTTGCATGCTCATTCTCCTGTGTGGCTAGATGCATTTCGGAAAAGTGTTTTGAATATTATTTCAGAGCAAGTATCATTCCAGAAAATAAGTTTAAAGTTTGAAATGTTTATTTTTTGTAACCCATGAATCTTCAGCTTAAGTATCTTCTGACATAAAAGCATTTTCATAATTATAAAAGTGCTGATATTACTCTCCACAGTATTATATCTGATCCTGCAAAGTAGTTCAGATACCAGAGAATACTCTTAAACATTTTGACTCACGCATTTAATTATGTTTAAAATTTATGTAACAAGACATTAAATGAGAAAGAATGGAATGAAAAATGGGTTAAAAGAATGCAAAATCGCAAAAAGAATGCTTTGAATTTAAATATTTCCCAAAATTTGATTTTCTGAGAAAATATATTAAAAATCATACGTAATTA</dnaseq>| | sequence = <dnaseq>CTGCAGCAGCAGCGGCGTGGTCAGAGCGAGCTTCGGAGAAGCAGTGGTGGGTTCCATGTGATGGTGGAGTAGGAGGCAGGTCTCCGCGGTCATTTACCATGCTGTCCTCCAGGTTCAACAGTATGGCTCCAAAGGATGAAATTTCATTCTGATTTTCTGGCTGAAGACTATTCTCTTTGTGTATGTCCACCACAGTTACTTTATCCCTTCATCTGTGGATGGGCAGTCTCGCTGTATTGCCCAGGCTGGAGTGCAGTGGCATGATCTCAGCTCACTGCAAGCTCTGCTTCCTGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCGCCACCACGCCCAGGAAAGAAAAAAGAAGAAAACAAACCTCCATACGAGAATGGGTCTAAAGGAACTTCCCAAACCTCCATGATTTTGCAGGAAACAAGATAAAGCTGGTTGGTGGAGAATTTGAACTGGAGATGAACTTTATTATCCAGGATGCTGAGAGTATAATACGCATGACAGAGCTTTTAGAGCACTGTGATGTAACATGTCAAGCAGAAATAGGGAGCATGTTTACAGCCATTCTATGAAAAAGTGTTTGGAATGTACAGACTAGCACAGAAGTTGGGCTAATTAAACAAGTATTGCTGAAAATGAGTGCTGTAGATGACATGAGAGCAGGTATGGGGTTGTCTGTTAGGAAAGTATAACTTAAAAGTTTATAAAGTTTCACATACTTCTCTTTATATTCTATAGGTAATGTAGATTTGTTGACACTACTTTGATTTAAAATAAATGGAAATGTATGGAAATTTTACTTTTTATATTAATGGAAAACCTGAAGAGTGAAAGAAGAAAAATATACTTACTATAGTAGACAAATATAATTACTAATGTTGTTTTCTAAATTTTAGAAAATCTCAGTACCACGGAGTGCTATGAAATCTATCAGAAAAATAAACAGTATCTTTTTATGTAGTATTTCATTAAGCTTTTACATAATTAAAATGCCACAATAGGTATTACAGTTCTGTATAATGAGCATTTTATCAAATTCCCCTAGTTCTGTGCCCCTCAATCTGGCATATATGCAACTATGACAGGAGGTACTAAAAGCCTTAGATAAGCATGGTGTATCTTTTTTTTTTCCCACGTATATTTTTTGTTGTTTTTTGTTTTTTTCTGTTATATGTCCTGGTTCTTCCATAACTTATAAACTTGATTTATACCGAGGAGGTGGGAAAGTGGGCGGGGCAGGGTGGACTGACCCGGGATGGGGAAGCTCCTCTCGCTGCCCCCTCGGGGCGGGCCTAGGCCCTTTGGAGGATGGGGACGCCAGGACACTCCTCCCTGAGGTCGTCTGGCCGCCTCTGCCCCTAGTGCTCAGAATCCTGTGTGCCCCTCAATTCCGGAATCCCTCCTGGGACCCCATGCCCACTGGGCACACTGCCCCTGGTACTCAGAATCCCGAAGCACCATTCGGTTCCAGAATCCCCTCCTCAGCTGCTGGGGTGGCGGGGTCCCTCCTTTCCGATGTCCCCCCCAACCCCTGAGGGGGGAGGGAAGGGAGGGGGGTCAGGTCTCCCCTCTGTGGCAGGGGGAGGTGGAGGTGGAGGTGGAATCGGAAGGGCGTGGAAGGCGGGGGCCAGGAGGGCTCAGCCGATGGTGAGTCCAGAGCCACACTGGAACTTGTTCTTGCGGTGATTCAGGAAGGCCCCAAGGGCCAGCGTCAGGGGCAGGAGCTGGAGCTTCTTCTCCAGCGTGGCACCCACGATCCAGTTGCTATCCACAGAGCCTTTGAAGAGGAGGTTGGCCTTGGGCAGGTCCAGCTGGTACCCGAAGGAGACGCTGGTATCCTGCATCCTTGTGCTGGCCTGAAAATCCACACCCACCTGCAACTGGTCACTGGCTTTGTGGTAGTATGTTGCGTCCATGCCCGCCTGGCTCAACGTTACCGTTGCCAACCAGTTGTTCAATGTGTATTTCTCAGCTAGAGACATGACAGTGCCCTCGTCCCCAGGCCGCCGGTTGTAGACCAGCTCTCCGCCCAGGGCCAGGCAAGGCCTGATGCTCTGGAGGTAGTGGGCTTCGAGAATTCTTGAACCCACGAGGACGTCTGGGATCCCCAGGGTGACGGCTGCGGTGAGTCAGAGCCCCGATACTCCCCGTCCACCTGCCAGTTCACAAACTTCGACTGCTGGGTCTGGATGGCCATCTTGGACCTGAGACCGGGGCCCAGCTGGTGAATGACCTGAGCGTGGAGACTGCCGCTGTTGTCCATGTCACCTACCAGTACAGGGAACGCCTCTGTGGGACTCAGCTGCTTTGTCCCCACATACGTGACCCCGAAGTGGTAGCTGGACTCCCCGATTGCGCTGAGGGCTACTGTGTGGTTCACCTGGAAACGGTTACTCAACCCTTTGTTGACTGTGAGCTTGACACCCTCCATCTGAATGGGAAACAGCTCCTTACACCTCCGGTGGCACTCCTGGAATGTGCCCGGGTTGGGCAGGCAGCCGCAGGCCCCATCCTCAGCGGCCCCTGAGGCGCTGGCGGTTGCAGCCCCGGGGGTCCGTTCCGAACCTCGACTCCTAGTGGTGCCGGCGCCCAGGCCGCCTCTCAGCGGCGGCAGCGTGAAGCCTGGCGGCGAGGGCGGAGGTGGCGGCCCTGCGGGCGGCGAGCTGGCGGCCAACATGTTCCCCATGGTCGCTGGCGGTGGCGCCTGCTCCCGGCCTGGTCTCCGCTCCCACCCGGTGCGCCACGCGCAACCGAACTCGCTGCCGCCGCCGCCACCCCCGTCGCCAGCATGGTGTATCTTTTGGACATGTCCATTTTGGAAGAAACTTTTGTGTTAAAATAAACTAATATATTATGGGCTAGAACATAAAATTCACCAAGAATTTCAAGATAAAAATACTAATGTTTTGCTTGTTTGGGTTATTTCAAACAATAACTTTGAAATCTATAATTTTTTCACCACCGACCCTCTACCTCCTTGCATGCTCATTCTCCTGTGTGGCTAGATGCATTTCGGAAAAGTGTTTTGAATATTATTTCAGAGCAAGTATCATTCCAGAAAATAAGTTTAAAGTTTGAAATGTTTATTTTTTGTAACCCATGAATCTTCAGCTTAAGTATCTTCTGACATAAAAGCATTTTCATAATTATAAAAGTGCTGATATTACTCTCCACAGTATTATATCTGATCCTGCAAAGTAGTTCAGATACCAGAGAATACTCTTAAACATTTTGACTCACGCATTTAATTATGTTTAAAATTTATGTAACAAGACATTAAATGAGAAAGAATGGAATGAAAAATGGGTTAAAAGAATGCAAAATCGCAAAAAGAATGCTTTGAATTTAAATATTTCCCAAAATTTGATTTTCTGAGAAAATATATTAAAAATCATACGTAATTA</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:lnc-POTEM-2]] | + | [[Category:Intergenic]][[Category:lnc-POTEM-2]][[Category:NONHSAG014338]] |
Revision as of 14:55, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000551334.1 |
Source |
Gencode19 |
Same with |
lnc-POTEM-2:7,NONHSAT035498 |
Classification |
intergenic |
Length |
3426 nt |
Genomic location |
chr14-:19854098..19925327 |
Exon number |
5 |
Exons |
19854098..19857070,19894700..19894790,19919138..19919273,19919492..19919629,19925240..19925327 |
Genome context |
|
Sequence |
000001 CTGCAGCAGC AGCGGCGTGG TCAGAGCGAG CTTCGGAGAA GCAGTGGTGG GTTCCATGTG ATGGTGGAGT AGGAGGCAGG 000080
000081 TCTCCGCGGT CATTTACCAT GCTGTCCTCC AGGTTCAACA GTATGGCTCC AAAGGATGAA ATTTCATTCT GATTTTCTGG 000160 000161 CTGAAGACTA TTCTCTTTGT GTATGTCCAC CACAGTTACT TTATCCCTTC ATCTGTGGAT GGGCAGTCTC GCTGTATTGC 000240 000241 CCAGGCTGGA GTGCAGTGGC ATGATCTCAG CTCACTGCAA GCTCTGCTTC CTGGGTTCAC GCCATTCTCC TGCCTCAGCC 000320 000321 TCCTGAGTAG CTGGGATTAC AGGCACCCGC CACCACGCCC AGGAAAGAAA AAAGAAGAAA ACAAACCTCC ATACGAGAAT 000400 000401 GGGTCTAAAG GAACTTCCCA AACCTCCATG ATTTTGCAGG AAACAAGATA AAGCTGGTTG GTGGAGAATT TGAACTGGAG 000480 000481 ATGAACTTTA TTATCCAGGA TGCTGAGAGT ATAATACGCA TGACAGAGCT TTTAGAGCAC TGTGATGTAA CATGTCAAGC 000560 000561 AGAAATAGGG AGCATGTTTA CAGCCATTCT ATGAAAAAGT GTTTGGAATG TACAGACTAG CACAGAAGTT GGGCTAATTA 000640 000641 AACAAGTATT GCTGAAAATG AGTGCTGTAG ATGACATGAG AGCAGGTATG GGGTTGTCTG TTAGGAAAGT ATAACTTAAA 000720 000721 AGTTTATAAA GTTTCACATA CTTCTCTTTA TATTCTATAG GTAATGTAGA TTTGTTGACA CTACTTTGAT TTAAAATAAA 000800 000801 TGGAAATGTA TGGAAATTTT ACTTTTTATA TTAATGGAAA ACCTGAAGAG TGAAAGAAGA AAAATATACT TACTATAGTA 000880 000881 GACAAATATA ATTACTAATG TTGTTTTCTA AATTTTAGAA AATCTCAGTA CCACGGAGTG CTATGAAATC TATCAGAAAA 000960 000961 ATAAACAGTA TCTTTTTATG TAGTATTTCA TTAAGCTTTT ACATAATTAA AATGCCACAA TAGGTATTAC AGTTCTGTAT 001040 001041 AATGAGCATT TTATCAAATT CCCCTAGTTC TGTGCCCCTC AATCTGGCAT ATATGCAACT ATGACAGGAG GTACTAAAAG 001120 001121 CCTTAGATAA GCATGGTGTA TCTTTTTTTT TTCCCACGTA TATTTTTTGT TGTTTTTTGT TTTTTTCTGT TATATGTCCT 001200 001201 GGTTCTTCCA TAACTTATAA ACTTGATTTA TACCGAGGAG GTGGGAAAGT GGGCGGGGCA GGGTGGACTG ACCCGGGATG 001280 001281 GGGAAGCTCC TCTCGCTGCC CCCTCGGGGC GGGCCTAGGC CCTTTGGAGG ATGGGGACGC CAGGACACTC CTCCCTGAGG 001360 001361 TCGTCTGGCC GCCTCTGCCC CTAGTGCTCA GAATCCTGTG TGCCCCTCAA TTCCGGAATC CCTCCTGGGA CCCCATGCCC 001440 001441 ACTGGGCACA CTGCCCCTGG TACTCAGAAT CCCGAAGCAC CATTCGGTTC CAGAATCCCC TCCTCAGCTG CTGGGGTGGC 001520 001521 GGGGTCCCTC CTTTCCGATG TCCCCCCCAA CCCCTGAGGG GGGAGGGAAG GGAGGGGGGT CAGGTCTCCC CTCTGTGGCA 001600 001601 GGGGGAGGTG GAGGTGGAGG TGGAATCGGA AGGGCGTGGA AGGCGGGGGC CAGGAGGGCT CAGCCGATGG TGAGTCCAGA 001680 001681 GCCACACTGG AACTTGTTCT TGCGGTGATT CAGGAAGGCC CCAAGGGCCA GCGTCAGGGG CAGGAGCTGG AGCTTCTTCT 001760 001761 CCAGCGTGGC ACCCACGATC CAGTTGCTAT CCACAGAGCC TTTGAAGAGG AGGTTGGCCT TGGGCAGGTC CAGCTGGTAC 001840 001841 CCGAAGGAGA CGCTGGTATC CTGCATCCTT GTGCTGGCCT GAAAATCCAC ACCCACCTGC AACTGGTCAC TGGCTTTGTG 001920 001921 GTAGTATGTT GCGTCCATGC CCGCCTGGCT CAACGTTACC GTTGCCAACC AGTTGTTCAA TGTGTATTTC TCAGCTAGAG 002000 002001 ACATGACAGT GCCCTCGTCC CCAGGCCGCC GGTTGTAGAC CAGCTCTCCG CCCAGGGCCA GGCAAGGCCT GATGCTCTGG 002080 002081 AGGTAGTGGG CTTCGAGAAT TCTTGAACCC ACGAGGACGT CTGGGATCCC CAGGGTGACG GCTGCGGTGA GTCAGAGCCC 002160 002161 CGATACTCCC CGTCCACCTG CCAGTTCACA AACTTCGACT GCTGGGTCTG GATGGCCATC TTGGACCTGA GACCGGGGCC 002240 002241 CAGCTGGTGA ATGACCTGAG CGTGGAGACT GCCGCTGTTG TCCATGTCAC CTACCAGTAC AGGGAACGCC TCTGTGGGAC 002320 002321 TCAGCTGCTT TGTCCCCACA TACGTGACCC CGAAGTGGTA GCTGGACTCC CCGATTGCGC TGAGGGCTAC TGTGTGGTTC 002400 002401 ACCTGGAAAC GGTTACTCAA CCCTTTGTTG ACTGTGAGCT TGACACCCTC CATCTGAATG GGAAACAGCT CCTTACACCT 002480 002481 CCGGTGGCAC TCCTGGAATG TGCCCGGGTT GGGCAGGCAG CCGCAGGCCC CATCCTCAGC GGCCCCTGAG GCGCTGGCGG 002560 002561 TTGCAGCCCC GGGGGTCCGT TCCGAACCTC GACTCCTAGT GGTGCCGGCG CCCAGGCCGC CTCTCAGCGG CGGCAGCGTG 002640 002641 AAGCCTGGCG GCGAGGGCGG AGGTGGCGGC CCTGCGGGCG GCGAGCTGGC GGCCAACATG TTCCCCATGG TCGCTGGCGG 002720 002721 TGGCGCCTGC TCCCGGCCTG GTCTCCGCTC CCACCCGGTG CGCCACGCGC AACCGAACTC GCTGCCGCCG CCGCCACCCC 002800 002801 CGTCGCCAGC ATGGTGTATC TTTTGGACAT GTCCATTTTG GAAGAAACTT TTGTGTTAAA ATAAACTAAT ATATTATGGG 002880 002881 CTAGAACATA AAATTCACCA AGAATTTCAA GATAAAAATA CTAATGTTTT GCTTGTTTGG GTTATTTCAA ACAATAACTT 002960 002961 TGAAATCTAT AATTTTTTCA CCACCGACCC TCTACCTCCT TGCATGCTCA TTCTCCTGTG TGGCTAGATG CATTTCGGAA 003040 003041 AAGTGTTTTG AATATTATTT CAGAGCAAGT ATCATTCCAG AAAATAAGTT TAAAGTTTGA AATGTTTATT TTTTGTAACC 003120 003121 CATGAATCTT CAGCTTAAGT ATCTTCTGAC ATAAAAGCAT TTTCATAATT ATAAAAGTGC TGATATTACT CTCCACAGTA 003200 003201 TTATATCTGA TCCTGCAAAG TAGTTCAGAT ACCAGAGAAT ACTCTTAAAC ATTTTGACTC ACGCATTTAA TTATGTTTAA 003280 003281 AATTTATGTA ACAAGACATT AAATGAGAAA GAATGGAATG AAAAATGGGT TAAAAGAATG CAAAATCGCA AAAAGAATGC 003360 003361 TTTGAATTTA AATATTTCCC AAAATTTGAT TTTCTGAGAA AATATATTAA AAATCATACG TAATTA |