Difference between revisions of "ENST00000376593.2"

Revision as of 10:14, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000376593.2
Source	Gencode19
Same with	lnc-AC108463.1-1:2,NONHSAT073611
Classification	intronic(AS)
Length	3026 nt
Genomic location	chr2-:111855922..111871762
Exon number	3
Exons	111855922..111858720,111859474..111859653,111871716..111871762
Genome context
Sequence	000001 CTAGTCCTGT TGAACTCAGA TGACTGCAGC CACAGGAGTG ATCCCAGAGT CTTTTGCACT GGGAGGAGAA GGTGGAACAG 000080 000081 GAGACACCCA CATTCTAGTT GGTCCCTGCT GTCTCCAAGA GGTGGTGAAC CAGGAGTCCT ACAGATGTGA AGCTAGGTTA 000160 000161 AAACCAGTTC TGGGGATGCT TTCAAATCAA AGAGGATTTA AAAATGTGAC TCCCAGTTGC ATTTCCGGAG CCAAGCAGCA 000240 000241 TCCTGGCTTG GGGGCCTGGT GTCTACCACA CTTCTGCGCA TTCTTCCTCC AAGCCACATC TCCTGAGAAT AAAGCAAGAT 000320 000321 GCCATTGGCA ATGTCTACTC AGAACTACTT GAATGACTCA TCAATCAACA GGCTTGAATG CTCTTCTTCC TCTATGATTC 000400 000401 AACGGTTTGA TTGACTGAAC TGAAACTAAA ACCCAACCCT AGTGGTCATT TTAGACTTGA GCAGATACAG TCAGAATCTC 000480 000481 AATCACATGT CATCAGCAGG CCCTCCTTGG CCTCCTTATT GCAGCTGGGC TCCTGAGCAG CTCTCCCTCA CTCAGGGAGG 000560 000561 AAACGAATGG CTCCTTTCAG TAGGGCAGAC GAAGGCTGCT GGCTGATGCA ACTGCTCCTG TGTCCACTTC CCAGCAAGGG 000640 000641 TGCAAAACAG GATTTGTGCT TGTGCTGGTG AATCTGGGCT TCACCTAGCA AATCAGGGGG ACACCAAAAT GAAAACAGCC 000720 000721 CTAGAGGCAT GGAGAAAGCC TCAGGTGCAC TAAGGTGCCA ACAGAAACGA TGCATCTCAG AGTTGACAGT CATGACTCAA 000800 000801 ATAGGACGTG AAGGCAACAT GTGGGTGAGA GTAGCAGCTA TGGGTGTAAA TATGATCAAA TATGGGGGAG GTGTCCAGAT 000880 000881 TTCTTGGACA TGGTTACAAT CAGTATTTAT TTTCTCTCTT AGTGAACGAG TTTTTGGTTT TTCAATACTG CTAATTTTAC 000960 000961 AGGCAATTCA CTACGTTCCC TGGGAGGTGG AGTGGCCTTC CTCCCTGCTG TGCGTGGGTT ACACAGCCTG CCTCACTTCC 001040 001041 CTGTGGGTCC TTCATCACCT GCATGCTCAC ATGATTCCAT TATTTGAGCT CATGGCAGGA AATAGAACCT GATTCAACAT 001120 001121 TTTGCTAAGT ATTATTTTCA CCACACTGAA TAGGGTCCTT TTTTGATCTG CAACCCACAG CTGGGCTGTG GTTCTCTCAA 001200 001201 CACAGGTAGA CTGAAAAGCT TCCTCCTGCA TTGATTTCTC AGCATGGGCT GACCACATGT TCACAAGTAC TTGTTCTTTT 001280 001281 CCATACGTCC CAATGCAGGC AGGCACTGGC AGAGCAGGAC AGCTGTGTCC AGGAGTTCAG GGAACAAAAT AAGGCTACTG 001360 001361 TAACTTCAGT CAACTTCAAG GCACGGTGTA AAATAAAGTA AGAGATTATC AGTCAAATAG CCATTTGCAT TAAAATTCTC 001440 001441 CACTTTAAGA AGCTGAGATC TTTGCTTTAT TTTTTAAAAA GCAAAATGAA GTCAGTTTTA ATGGAGATAT ACAATTGTTA 001520 001521 ACTGTTGGGT CATTTTGAAA GGCTTTCTTC CTTAAAATGA GTCTCAGCTG ATAGCTACTC ACTAATGCTG ATAATTATCT 001600 001601 GAAGCAAAAT AAATACAAAT GTCTGGGTTA ATGAAGACTG AAACAGGATA ATGCCTGGAC ACTAAATTTT CCAAGAACAA 001680 001681 GGAACACAAT TGTTCTCTAC ATACCCCTGC AAAAATGCTT AATGGCCAGG ACACAGGAAT CTTGTGTACT TAGAGACCTT 001760 001761 GTTAGGATGG AGCCCCGGGG GCACCACCAC TGGCCTTCGA GCCAAGGTCT CACAGAGAGG GCAGCAAGGG GGAGCAGCTC 001840 001841 ATCCTCCTCC CCAGCTAGGG AGACACTAGG ACAGCAGTGG AGTGGAGTCC GAAATCTGCC ATAGAAGCCC CAGCTTACTA 001920 001921 TTTGCTCACT GAGCAGCAAG TCAA

@@ Line 42: / Line 42: @@
 sequence = <dnaseq>CTAGTCCTGTTGAACTCAGATGACTGCAGCCACAGGAGTGATCCCAGAGTCTTTTGCACTGGGAGGAGAAGGTGGAACAGGAGACACCCACATTCTAGTTGGTCCCTGCTGTCTCCAAGAGGTGGTGAACCAGGAGTCCTACAGATGTGAAGCTAGGTTAAAACCAGTTCTGGGGATGCTTTCAAATCAAAGAGGATTTAAAAATGTGACTCCCAGTTGCATTTCCGGAGCCAAGCAGCATCCTGGCTTGGGGGCCTGGTGTCTACCACACTTCTGCGCATTCTTCCTCCAAGCCACATCTCCTGAGAATAAAGCAAGATGCCATTGGCAATGTCTACTCAGAACTACTTGAATGACTCATCAATCAACAGGCTTGAATGCTCTTCTTCCTCTATGATTCAACGGTTTGATTGACTGAACTGAAACTAAAACCCAACCCTAGTGGTCATTTTAGACTTGAGCAGATACAGTCAGAATCTCAATCACATGTCATCAGCAGGCCCTCCTTGGCCTCCTTATTGCAGCTGGGCTCCTGAGCAGCTCTCCCTCACTCAGGGAGGAAACGAATGGCTCCTTTCAGTAGGGCAGACGAAGGCTGCTGGCTGATGCAACTGCTCCTGTGTCCACTTCCCAGCAAGGGTGCAAAACAGGATTTGTGCTTGTGCTGGTGAATCTGGGCTTCACCTAGCAAATCAGGGGGACACCAAAATGAAAACAGCCCTAGAGGCATGGAGAAAGCCTCAGGTGCACTAAGGTGCCAACAGAAACGATGCATCTCAGAGTTGACAGTCATGACTCAAATAGGACGTGAAGGCAACATGTGGGTGAGAGTAGCAGCTATGGGTGTAAATATGATCAAATATGGGGGAGGTGTCCAGATTTCTTGGACATGGTTACAATCAGTATTTATTTTCTCTCTTAGTGAACGAGTTTTTGGTTTTTCAATACTGCTAATTTTACAGGCAATTCACTACGTTCCCTGGGAGGTGGAGTGGCCTTCCTCCCTGCTGTGCGTGGGTTACACAGCCTGCCTCACTTCCCTGTGGGTCCTTCATCACCTGCATGCTCACATGATTCCATTATTTGAGCTCATGGCAGGAAATAGAACCTGATTCAACATTTTGCTAAGTATTATTTTCACCACACTGAATAGGGTCCTTTTTTGATCTGCAACCCACAGCTGGGCTGTGGTTCTCTCAACACAGGTAGACTGAAAAGCTTCCTCCTGCATTGATTTCTCAGCATGGGCTGACCACATGTTCACAAGTACTTGTTCTTTTCCATACGTCCCAATGCAGGCAGGCACTGGCAGAGCAGGACAGCTGTGTCCAGGAGTTCAGGGAACAAAATAAGGCTACTGTAACTTCAGTCAACTTCAAGGCACGGTGTAAAATAAAGTAAGAGATTATCAGTCAAATAGCCATTTGCATTAAAATTCTCCACTTTAAGAAGCTGAGATCTTTGCTTTATTTTTTAAAAAGCAAAATGAAGTCAGTTTTAATGGAGATATACAATTGTTAACTGTTGGGTCATTTTGAAAGGCTTTCTTCCTTAAAATGAGTCTCAGCTGATAGCTACTCACTAATGCTGATAATTATCTGAAGCAAAATAAATACAAATGTCTGGGTTAATGAAGACTGAAACAGGATAATGCCTGGACACTAAATTTTCCAAGAACAAGGAACACAATTGTTCTCTACATACCCCTGCAAAAATGCTTAATGGCCAGGACACAGGAATCTTGTGTACTTAGAGACCTTGTTAGGATGGAGCCCCGGGGGCACCACCACTGGCCTTCGAGCCAAGGTCTCACAGAGAGGGCAGCAAGGGGGAGCAGCTCATCCTCCTCCCCAGCTAGGGAGACACTAGGACAGCAGTGGAGTGGAGTCCGAAATCTGCCATAGAAGCCCCAGCTTACTATTTGCTCACTGAGCAGCAAGTCAACCTCAGTTTCTCTGTGCCTACAGGGGAGTAACAGCTGTTCACACTAAAGGGTGCTTGTGAGGATGATATAAGAATGAATATGGACCTGCTCTGACAACACTGAAGTTCCAGACAAAAGAATAGGCATTAGTTATCTGATTTGAAGGACTGTGGGGGATTGGAATTTTAAAAATAAACCTCAACCCAACTCCTTCTCTTGTGGGGCCTCGGTTGAACAACTGGGCACTTGCACTGCCTTCTGAATATGTGGATGGATTTTGCCTGCTTTGGAGAAGCATATGAACTCCTCAGGGCATCTAGTGCCCTAGAGTGTGCCAAAGGAACAAGGAGGACTACAAATGGGTGATGCCTGGAGCTTAACCCACCTCCATTTGGGATTCGGAGCTCTGGTTTCTGTGTTCAGCTAGAATCTTCGACAGTCATTTAATGTCTCTCTTTCTTAGTTTTACTCATTTGTTGAATGGGGATTATATTAGCCTTACTTTCCTTGAAGGTCTTAATGAGAATGAAATGAGATAATTTTTAAGTATATATATGCATTTCTAATTTCCATCAGACTGGAGCGTCGGTATAAGTCCTGGGTGTTCTGGAAAGTTTTATTTATTTAGAAACAGTTTAGGCTGATTGCTATCTCCCTATGCTAACTTTTTGTTTTTTTAGTAAACTTTTTATTTTGGAATACTTTCAAATTTACAGAAAAGTTTCAAAGATAACAAGAGTTCTCATTTGCCCTTCACCCAGTTTCCCCATAACTATGGCTCATTGTAAAAACTAGGAAACCAATATTAATGCATTACTAATAACTATAGACTTTATTCAGATTTTACCAGTTTTTCTACTCATGTTCTTCTGTCCCAGGATTCAATACATGATACTGCATTGTATTTAGTTACCATATCTCCTGAGTCTCTTCTGCTCTGTGATGGCTTCAGTCTTTTCTCGTCTTCCATGCATCGTCAGTTTTAATGGGTACTAGGCAGGTATTATGGACAAGCTTGGCAAATCCACAGCCCATGGGCCACATGAGGCCCAGGATAACTTTGAATGTGGCCCAGTACAAATTCATAAACTTTTTAAAAAAC</dnaseq>|
 }}
-[[Category:Intronic(AS)]][[Category:lnc-AC108463.1-1]][[Category:NONHSAG028936]][[Category:ENSG00000204581.2]]
+[[Category:Intronic(AS)]][[Category:lnc-AC108463.1-1]][[Category:NONHSAG028936]][[Category:ENSG00000204581.2]][[Category:Transcripts]]