Difference between revisions of "ENST00000432431.1"
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sequence = <dnaseq>GACTCAGGACCTCTAAGTAGCATCAAGGTACCACAGCAATCTCCCTGCTATAGCACTTCATGCAGTTCCAGCCCACCCCGATCCAAGCACATGGCAGAACTGTACTTCCTGGATCTCCTGAGTTATACAGGAATATTTCACCTCTTCCCTATTTTAAAAAACAACCTCTGCAAAGACAAGATATGTCTGCCATGTGCCTGAATGTCAAAATATTTGAATAAAATTGAAAAGTTGACACTGAAATCCGATATGACTTCTTCGACATATAAAGCCAGAGGGAGATGGCCCCAAGAACACCAGGCACCACCTGCATTTACATCGTCGAAATGAAAAAGTGAAAAAGGAACAAATGTGGTCTCATTACTTTCCATAAAGGGAAAGCTCTTTACCACAACAATGCCTATTATACCAGATTATCAAACACAGAATCACATTGTAACTTCTGGAAAGTATGGAATATGTATACACAGAACAGAGCCAAAAGAACTCCAGACAGGTATGCCTCACCCTCAGGGACTCATGTGTTACAGAAAATGTTGGGAAAACTGAATAATAGGGACAAAAGAAACTCGCCATGTTAAGGTTTTCTAAACTGAAATTATTCTTACTTGTTTTAATTTACTTTTCTTACAATGCTTAATTCTCATATTTTTTAAGTAAGTTGCATTTATACCTTTGTTAAATGTAGGCCTTTTGATATAAGAAGTCAGTTTGGCAGAATTGCATTGATACATATTTGATGACATTCGTTCAAATATTTTCATTATTCCAAATAGGGGGAGGATTCCATAATAGCCCC</dnaseq>| | sequence = <dnaseq>GACTCAGGACCTCTAAGTAGCATCAAGGTACCACAGCAATCTCCCTGCTATAGCACTTCATGCAGTTCCAGCCCACCCCGATCCAAGCACATGGCAGAACTGTACTTCCTGGATCTCCTGAGTTATACAGGAATATTTCACCTCTTCCCTATTTTAAAAAACAACCTCTGCAAAGACAAGATATGTCTGCCATGTGCCTGAATGTCAAAATATTTGAATAAAATTGAAAAGTTGACACTGAAATCCGATATGACTTCTTCGACATATAAAGCCAGAGGGAGATGGCCCCAAGAACACCAGGCACCACCTGCATTTACATCGTCGAAATGAAAAAGTGAAAAAGGAACAAATGTGGTCTCATTACTTTCCATAAAGGGAAAGCTCTTTACCACAACAATGCCTATTATACCAGATTATCAAACACAGAATCACATTGTAACTTCTGGAAAGTATGGAATATGTATACACAGAACAGAGCCAAAAGAACTCCAGACAGGTATGCCTCACCCTCAGGGACTCATGTGTTACAGAAAATGTTGGGAAAACTGAATAATAGGGACAAAAGAAACTCGCCATGTTAAGGTTTTCTAAACTGAAATTATTCTTACTTGTTTTAATTTACTTTTCTTACAATGCTTAATTCTCATATTTTTTAAGTAAGTTGCATTTATACCTTTGTTAAATGTAGGCCTTTTGATATAAGAAGTCAGTTTGGCAGAATTGCATTGATACATATTTGATGACATTCGTTCAAATATTTTCATTATTCCAAATAGGGGGAGGATTCCATAATAGCCCC</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:lnc-ZEB2-2]][[Category:NONHSAG029470]][[Category:ENSG00000234940.1]] | + | [[Category:Intergenic]][[Category:lnc-ZEB2-2]][[Category:NONHSAG029470]][[Category:ENSG00000234940.1]][[Category:Transcripts]] |
Latest revision as of 15:25, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000432431.1 |
Source |
Gencode19 |
Same with |
lnc-ZEB2-2:1,NONHSAT074809 |
Classification |
intergenic |
Length |
799 nt |
Genomic location |
chr2-:145445980..145447752 |
Exon number |
2 |
Exons |
145445980..145446642,145447617..145447752 |
Genome context |
|
Sequence |
000001 GACTCAGGAC CTCTAAGTAG CATCAAGGTA CCACAGCAAT CTCCCTGCTA TAGCACTTCA TGCAGTTCCA GCCCACCCCG 000080
000081 ATCCAAGCAC ATGGCAGAAC TGTACTTCCT GGATCTCCTG AGTTATACAG GAATATTTCA CCTCTTCCCT ATTTTAAAAA 000160 000161 ACAACCTCTG CAAAGACAAG ATATGTCTGC CATGTGCCTG AATGTCAAAA TATTTGAATA AAATTGAAAA GTTGACACTG 000240 000241 AAATCCGATA TGACTTCTTC GACATATAAA GCCAGAGGGA GATGGCCCCA AGAACACCAG GCACCACCTG CATTTACATC 000320 000321 GTCGAAATGA AAAAGTGAAA AAGGAACAAA TGTGGTCTCA TTACTTTCCA TAAAGGGAAA GCTCTTTACC ACAACAATGC 000400 000401 CTATTATACC AGATTATCAA ACACAGAATC ACATTGTAAC TTCTGGAAAG TATGGAATAT GTATACACAG AACAGAGCCA 000480 000481 AAAGAACTCC AGACAGGTAT GCCTCACCCT CAGGGACTCA TGTGTTACAG AAAATGTTGG GAAAACTGAA TAATAGGGAC 000560 000561 AAAAGAAACT CGCCATGTTA AGGTTTTCTA AACTGAAATT ATTCTTACTT GTTTTAATTT ACTTTTCTTA CAATGCTTAA 000640 000641 TTCTCATATT TTTTAAGTAA GTTGCATTTA TACCTTTGTT AAATGTAGGC CTTTTGATAT AAGAAGTCAG TTTGGCAGAA 000720 000721 TTGCATTGAT ACATATTTGA TGACATTCGT TCAAATATTT TCATTATTCC AAATAGGGGG AGGATTCCAT AATAGCCCC |
Predicted Small Protein
Name | ENST00000432431.1_smProtein_59:220 |
Length | 54 |
Molecular weight | 6146.1504 |
Aromaticity | 0.0943396226415 |
Instability index | 70.0547169811 |
Isoelectric point | 9.51287841797 |
Runs | 9 |
Runs residual | 0.00954901058444 |
Runs probability | 0.0212172957271 |
Amino acid sequence | MQFQPTPIQAHGRTVLPGSPELYRNISPLPYFKKQPLQRQDMSAMCLNVKIFE |
Secondary structure | LLLLLLLLLLLLLEELLLLLLLLLLLLLLLLLLLLLLHHHLHHHHHLLLEEEL |
PRMN | - |
PiMo | - |