Difference between revisions of "ENST00000554735.1"
| Line 42: | Line 42: | ||
sequence = <dnaseq>GCCCAGCGCAGCCCCGGCCGCTGGGCGCACCCGTCCCGTTCGTCCCCGGACGTTGCTCTCTACCCCGGGAACGTCGAGACTGGAGCGCCCGAACTGAGCCACCTTCGCGGACCCCGAGAGCGGCGGCGCGACTCACCGCGGAGGCGCCCGGACGCGTCAAGTGCGTACTTTCAACCGTAAATGGGTGCTGAGCGTTTAGGGGTGCGGGGCAACTCCCTAACTCGTGGGGCCCTGGCCGGCCCTGCCGCGGCGTCCGAGACCTTCTGATCCCTCGCTGCGCGCGGCGCGGGGTTGGCGACTTGGGCTCAGGGGCGGCGGGGCGGGGAGGTGCCTTGACCTAGGGACCCAGAGGCCGGGAGCAAGTCTCCTTTCGCCTTGGACTGCAGTGTCCCCCAGGGCAAGGCCTGAACCAGGTCGCGAGGGTCTGTCTCCCGTCTGGGGAGCTGAACTGCCCGAGACACTGTCGCAGTCGCGGGGACTTGTCTGGAGCGGCGGGGTCTGAGCCCAAGTCGGAAGCCGCCGCCGCCGCCAGCGTCCCGTGCGCCTGCCGCCCCGGGACCAGCCGCGAAACTTCTTCTCGGGACGGAGACAGCGCTCGCCGCCCGGGCCGAGGTAGGAGCTGGCTGGGCTCGGTAGAGCGCGGGCGAATCGCTTTCGGCAGCGAAGGAACGTGTCGGGAGAAGCCAACTGCAGGACCAGGGCCCCAGCGGGCGCGCAGAGACGCCTGCCTTGGGCGGAGGTCCCCCCCTCCGGTTTTCGTGGCTCTGGTAGGGCCCTCTGTCCCGTGAGCTCCTCACTGGACCTGAGGCTACAGGCTTCAGCAGGTCAAGCGCCCGAGTGTGCCTGGAGGATTGGCGGCGGGGTGGCATGAGAAGGTGGCCCCTCTTCTCCATCTCCCAGTCAGGCGATTTCTCTGCTGTCTGGGGCAGGGGCGCACACCCCAGGAACTTACTACGTAGAGGGAAGCCAGCCTGGTCTCTCCCCCTTGCGTCAGTGCTCCTAAGCTGCCCCTCACCACTCTGGGTAGGGGTCTTTCAGGTGGGCTAGGGAATTCTCCTTGGAAGTCCCCTTGTTTGCTCCCCTCCATCAGGGCACCTCTGAGTTAGCCAATCATCCTCTTTTCTGGCCTCTTTTTTGCGGGGAGGAGAGTAGAGAGAGAAGCCTCCTACTCGGCAGGTCTCTGAGAGGAGGTTTGGGGGGGCTTCTGAGGTTGCTCCTCCTGGGCAGAGTCAAGGGGTGTTGAGGGTTCCAACTTTTACTGGACAATCTCTCAAGCTCTGATTCCCTGATTTCTGGGAGGTGTCAGTGTAGGGCTTGTGTCCTGCCCCACCCACACAGCATTTGGTGCAGGCACATGGGATGGTTCCCCAAGCCCTTTTCCCACAGTTAGTTTCAGAAAATGCATAAGCCACCTAAGGCTGGGAGAGCCTTTCTGTGCTGGCTGAGATCTGGTGGCATGTGCATGCATATGTGTGCAAGTGTGTGTGTGTGTGTGCAAGTGTGTGTGCGCATGTGCATGTGTGTGGAAAGTATGGTCTGGGTGGCTGTAAGACTGGCCCCTCTTGTCCCCTCTGCAGGCCCAGCCCAATAGGAAGCACCTGATCCACACTCTTTCTAGCCCCAGGGATGCTCAGGAAAGCAGCCTTTCTTTAGGGCTGTCATCTGTTCTGGGGATCTGTTGCTGTTTCTTGGGCCCACAGAATACACTCCACACCTCGGGACTCCATAATATTGGACAAGGCTGGAAGGCCCATTTGGCTCCTGCAGCCTCTTATGCAGGTGAGGACAGACCCAAGGTCCAGGCAATGCTGGCCTTTGGAACACAGAACCTGGCTCACTGACTCCCACTCCAGTTGTCTTTTCCCTCTGCCTCTGGAGCAACCCTCTCTCCTCCAGAGCAACCCCTGTCCCTCCTTCCTACCTCTCTCTAGGGCTGCACCCCCAGCTCACCTTAGACCTGGCCCTTCCTACCTGTTGCCCCTACTGTCTTGTCCCATCCCAGTGGTCAGGAGGGAGAGTACTGGCCAAAGGCCCAGCTCCACCTGTGACTTAGGGGAGTGCCAGGCATCACCCAGAGGTCCCGGCCCTCGGGGGCCTGGCAGGCTCTGCTGTGGGGGAAGCAGAGTTAGAACTGGGGCTGCTTCTCCTGTCCCCCAGCCTGGCTGGGCCTCCCCCACCTCCCTTTCTGCCTGCCCTCTTACAACTCCAGCAGGGGGCGGGCAGGGGAAAGAAAAGGAGGGACAAGTTGGATGGGGTCCATTTGGTGTCCAGGAACAACTTGGAGAGAGGCGGGGAGGGGACAGGCAGCAGGGCCCTGGCAGAGCCAGGGGAGGGCTGGCCTTTGGATGGCCTTCTGATCCCAAGCCCATCCTCCTGGGGCAGTCTTCCCTTGAAAGGGAGGGTTTGGTGAACCCTGGTGCGGACCCCCCCGCCGGACCTCACTGCCCCAGTGCGGGGCGTGGTAGGCGGGTTTGCAATGGGTACAGCCTCTCTCTCCATTCCAGTAGAGCAGCTCCCAGGGCCCAGAGAGGCTGTCACTGAGACTTCCCTCTGGGGTGGGGTGGGTTCTGGTGGCCCTGTGTTCCCCTGCAGGAGGACCTCCTGAGGCTTCGGGCAGGAGCTGGTGCACACCTGGAGGAGAGTGCTGGTGAATGGCAGGTGTGTGCCTCAGTGTCCTTGCTGCCAGGGTGTCAGCCCTGCTTCACCACTGGCCGTTTGTCTCTGTCCCCTCCACTGGCCTCTTGAAGCACAGAGACCCTCCGGGTACTTTCCTTCCTCTGGGCTTCCACTCATGCTATTCCCTGCTCCCTTTTTCTACCTGGAGACCCCCATTCCTCCTCCTCCTCTGCTGCCCTCACCTCCACCTGGGCCCTCCCAGCTCCCGGGAGATGGCTGAACCCCACTCCCCACCCGCTAGTCATCCTCTTCAGCGGTCCTCCCAGAGCTGTCCTCAGCATGGCAGCCTCCACAGCCCCTGGGTGTCACCCCCGGTTTCGTGTCTGCCTCGGACTCCAGACCTGCCCCTCCCAGGCTGGCCCAGATGGATCCTCTACAGTGACTAACCCAAACCAGCACCAGGCAGGGACCCAATAAACCTTTGTGAATGGA</dnaseq>| | sequence = <dnaseq>GCCCAGCGCAGCCCCGGCCGCTGGGCGCACCCGTCCCGTTCGTCCCCGGACGTTGCTCTCTACCCCGGGAACGTCGAGACTGGAGCGCCCGAACTGAGCCACCTTCGCGGACCCCGAGAGCGGCGGCGCGACTCACCGCGGAGGCGCCCGGACGCGTCAAGTGCGTACTTTCAACCGTAAATGGGTGCTGAGCGTTTAGGGGTGCGGGGCAACTCCCTAACTCGTGGGGCCCTGGCCGGCCCTGCCGCGGCGTCCGAGACCTTCTGATCCCTCGCTGCGCGCGGCGCGGGGTTGGCGACTTGGGCTCAGGGGCGGCGGGGCGGGGAGGTGCCTTGACCTAGGGACCCAGAGGCCGGGAGCAAGTCTCCTTTCGCCTTGGACTGCAGTGTCCCCCAGGGCAAGGCCTGAACCAGGTCGCGAGGGTCTGTCTCCCGTCTGGGGAGCTGAACTGCCCGAGACACTGTCGCAGTCGCGGGGACTTGTCTGGAGCGGCGGGGTCTGAGCCCAAGTCGGAAGCCGCCGCCGCCGCCAGCGTCCCGTGCGCCTGCCGCCCCGGGACCAGCCGCGAAACTTCTTCTCGGGACGGAGACAGCGCTCGCCGCCCGGGCCGAGGTAGGAGCTGGCTGGGCTCGGTAGAGCGCGGGCGAATCGCTTTCGGCAGCGAAGGAACGTGTCGGGAGAAGCCAACTGCAGGACCAGGGCCCCAGCGGGCGCGCAGAGACGCCTGCCTTGGGCGGAGGTCCCCCCCTCCGGTTTTCGTGGCTCTGGTAGGGCCCTCTGTCCCGTGAGCTCCTCACTGGACCTGAGGCTACAGGCTTCAGCAGGTCAAGCGCCCGAGTGTGCCTGGAGGATTGGCGGCGGGGTGGCATGAGAAGGTGGCCCCTCTTCTCCATCTCCCAGTCAGGCGATTTCTCTGCTGTCTGGGGCAGGGGCGCACACCCCAGGAACTTACTACGTAGAGGGAAGCCAGCCTGGTCTCTCCCCCTTGCGTCAGTGCTCCTAAGCTGCCCCTCACCACTCTGGGTAGGGGTCTTTCAGGTGGGCTAGGGAATTCTCCTTGGAAGTCCCCTTGTTTGCTCCCCTCCATCAGGGCACCTCTGAGTTAGCCAATCATCCTCTTTTCTGGCCTCTTTTTTGCGGGGAGGAGAGTAGAGAGAGAAGCCTCCTACTCGGCAGGTCTCTGAGAGGAGGTTTGGGGGGGCTTCTGAGGTTGCTCCTCCTGGGCAGAGTCAAGGGGTGTTGAGGGTTCCAACTTTTACTGGACAATCTCTCAAGCTCTGATTCCCTGATTTCTGGGAGGTGTCAGTGTAGGGCTTGTGTCCTGCCCCACCCACACAGCATTTGGTGCAGGCACATGGGATGGTTCCCCAAGCCCTTTTCCCACAGTTAGTTTCAGAAAATGCATAAGCCACCTAAGGCTGGGAGAGCCTTTCTGTGCTGGCTGAGATCTGGTGGCATGTGCATGCATATGTGTGCAAGTGTGTGTGTGTGTGTGCAAGTGTGTGTGCGCATGTGCATGTGTGTGGAAAGTATGGTCTGGGTGGCTGTAAGACTGGCCCCTCTTGTCCCCTCTGCAGGCCCAGCCCAATAGGAAGCACCTGATCCACACTCTTTCTAGCCCCAGGGATGCTCAGGAAAGCAGCCTTTCTTTAGGGCTGTCATCTGTTCTGGGGATCTGTTGCTGTTTCTTGGGCCCACAGAATACACTCCACACCTCGGGACTCCATAATATTGGACAAGGCTGGAAGGCCCATTTGGCTCCTGCAGCCTCTTATGCAGGTGAGGACAGACCCAAGGTCCAGGCAATGCTGGCCTTTGGAACACAGAACCTGGCTCACTGACTCCCACTCCAGTTGTCTTTTCCCTCTGCCTCTGGAGCAACCCTCTCTCCTCCAGAGCAACCCCTGTCCCTCCTTCCTACCTCTCTCTAGGGCTGCACCCCCAGCTCACCTTAGACCTGGCCCTTCCTACCTGTTGCCCCTACTGTCTTGTCCCATCCCAGTGGTCAGGAGGGAGAGTACTGGCCAAAGGCCCAGCTCCACCTGTGACTTAGGGGAGTGCCAGGCATCACCCAGAGGTCCCGGCCCTCGGGGGCCTGGCAGGCTCTGCTGTGGGGGAAGCAGAGTTAGAACTGGGGCTGCTTCTCCTGTCCCCCAGCCTGGCTGGGCCTCCCCCACCTCCCTTTCTGCCTGCCCTCTTACAACTCCAGCAGGGGGCGGGCAGGGGAAAGAAAAGGAGGGACAAGTTGGATGGGGTCCATTTGGTGTCCAGGAACAACTTGGAGAGAGGCGGGGAGGGGACAGGCAGCAGGGCCCTGGCAGAGCCAGGGGAGGGCTGGCCTTTGGATGGCCTTCTGATCCCAAGCCCATCCTCCTGGGGCAGTCTTCCCTTGAAAGGGAGGGTTTGGTGAACCCTGGTGCGGACCCCCCCGCCGGACCTCACTGCCCCAGTGCGGGGCGTGGTAGGCGGGTTTGCAATGGGTACAGCCTCTCTCTCCATTCCAGTAGAGCAGCTCCCAGGGCCCAGAGAGGCTGTCACTGAGACTTCCCTCTGGGGTGGGGTGGGTTCTGGTGGCCCTGTGTTCCCCTGCAGGAGGACCTCCTGAGGCTTCGGGCAGGAGCTGGTGCACACCTGGAGGAGAGTGCTGGTGAATGGCAGGTGTGTGCCTCAGTGTCCTTGCTGCCAGGGTGTCAGCCCTGCTTCACCACTGGCCGTTTGTCTCTGTCCCCTCCACTGGCCTCTTGAAGCACAGAGACCCTCCGGGTACTTTCCTTCCTCTGGGCTTCCACTCATGCTATTCCCTGCTCCCTTTTTCTACCTGGAGACCCCCATTCCTCCTCCTCCTCTGCTGCCCTCACCTCCACCTGGGCCCTCCCAGCTCCCGGGAGATGGCTGAACCCCACTCCCCACCCGCTAGTCATCCTCTTCAGCGGTCCTCCCAGAGCTGTCCTCAGCATGGCAGCCTCCACAGCCCCTGGGTGTCACCCCCGGTTTCGTGTCTGCCTCGGACTCCAGACCTGCCCCTCCCAGGCTGGCCCAGATGGATCCTCTACAGTGACTAACCCAAACCAGCACCAGGCAGGGACCCAATAAACCTTTGTGAATGGA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:lnc-HSP90AA1-9]][[Category:NONHSAG015952]][[Category:ENSG00000258498.2]] | + | [[Category:Intergenic]][[Category:lnc-HSP90AA1-9]][[Category:NONHSAG015952]][[Category:ENSG00000258498.2]][[Category:Transcripts]] |
Latest revision as of 17:36, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
ENST00000554735.1 |
| Source |
Gencode19 |
| Same with |
lnc-HSP90AA1-9:3,NONHSAT040038 |
| Classification |
intergenic |
| Length |
3108 nt |
| Genomic location |
chr14-:102023641..102026748 |
| Exon number |
1 |
| Exons |
102023641..102026748 |
| Genome context |
|
| Sequence |
000001 GCCCAGCGCA GCCCCGGCCG CTGGGCGCAC CCGTCCCGTT CGTCCCCGGA CGTTGCTCTC TACCCCGGGA ACGTCGAGAC 000080
000081 TGGAGCGCCC GAACTGAGCC ACCTTCGCGG ACCCCGAGAG CGGCGGCGCG ACTCACCGCG GAGGCGCCCG GACGCGTCAA 000160 000161 GTGCGTACTT TCAACCGTAA ATGGGTGCTG AGCGTTTAGG GGTGCGGGGC AACTCCCTAA CTCGTGGGGC CCTGGCCGGC 000240 000241 CCTGCCGCGG CGTCCGAGAC CTTCTGATCC CTCGCTGCGC GCGGCGCGGG GTTGGCGACT TGGGCTCAGG GGCGGCGGGG 000320 000321 CGGGGAGGTG CCTTGACCTA GGGACCCAGA GGCCGGGAGC AAGTCTCCTT TCGCCTTGGA CTGCAGTGTC CCCCAGGGCA 000400 000401 AGGCCTGAAC CAGGTCGCGA GGGTCTGTCT CCCGTCTGGG GAGCTGAACT GCCCGAGACA CTGTCGCAGT CGCGGGGACT 000480 000481 TGTCTGGAGC GGCGGGGTCT GAGCCCAAGT CGGAAGCCGC CGCCGCCGCC AGCGTCCCGT GCGCCTGCCG CCCCGGGACC 000560 000561 AGCCGCGAAA CTTCTTCTCG GGACGGAGAC AGCGCTCGCC GCCCGGGCCG AGGTAGGAGC TGGCTGGGCT CGGTAGAGCG 000640 000641 CGGGCGAATC GCTTTCGGCA GCGAAGGAAC GTGTCGGGAG AAGCCAACTG CAGGACCAGG GCCCCAGCGG GCGCGCAGAG 000720 000721 ACGCCTGCCT TGGGCGGAGG TCCCCCCCTC CGGTTTTCGT GGCTCTGGTA GGGCCCTCTG TCCCGTGAGC TCCTCACTGG 000800 000801 ACCTGAGGCT ACAGGCTTCA GCAGGTCAAG CGCCCGAGTG TGCCTGGAGG ATTGGCGGCG GGGTGGCATG AGAAGGTGGC 000880 000881 CCCTCTTCTC CATCTCCCAG TCAGGCGATT TCTCTGCTGT CTGGGGCAGG GGCGCACACC CCAGGAACTT ACTACGTAGA 000960 000961 GGGAAGCCAG CCTGGTCTCT CCCCCTTGCG TCAGTGCTCC TAAGCTGCCC CTCACCACTC TGGGTAGGGG TCTTTCAGGT 001040 001041 GGGCTAGGGA ATTCTCCTTG GAAGTCCCCT TGTTTGCTCC CCTCCATCAG GGCACCTCTG AGTTAGCCAA TCATCCTCTT 001120 001121 TTCTGGCCTC TTTTTTGCGG GGAGGAGAGT AGAGAGAGAA GCCTCCTACT CGGCAGGTCT CTGAGAGGAG GTTTGGGGGG 001200 001201 GCTTCTGAGG TTGCTCCTCC TGGGCAGAGT CAAGGGGTGT TGAGGGTTCC AACTTTTACT GGACAATCTC TCAAGCTCTG 001280 001281 ATTCCCTGAT TTCTGGGAGG TGTCAGTGTA GGGCTTGTGT CCTGCCCCAC CCACACAGCA TTTGGTGCAG GCACATGGGA 001360 001361 TGGTTCCCCA AGCCCTTTTC CCACAGTTAG TTTCAGAAAA TGCATAAGCC ACCTAAGGCT GGGAGAGCCT TTCTGTGCTG 001440 001441 GCTGAGATCT GGTGGCATGT GCATGCATAT GTGTGCAAGT GTGTGTGTGT GTGTGCAAGT GTGTGTGCGC ATGTGCATGT 001520 001521 GTGTGGAAAG TATGGTCTGG GTGGCTGTAA GACTGGCCCC TCTTGTCCCC TCTGCAGGCC CAGCCCAATA GGAAGCACCT 001600 001601 GATCCACACT CTTTCTAGCC CCAGGGATGC TCAGGAAAGC AGCCTTTCTT TAGGGCTGTC ATCTGTTCTG GGGATCTGTT 001680 001681 GCTGTTTCTT GGGCCCACAG AATACACTCC ACACCTCGGG ACTCCATAAT ATTGGACAAG GCTGGAAGGC CCATTTGGCT 001760 001761 CCTGCAGCCT CTTATGCAGG TGAGGACAGA CCCAAGGTCC AGGCAATGCT GGCCTTTGGA ACACAGAACC TGGCTCACTG 001840 001841 ACTCCCACTC CAGTTGTCTT TTCCCTCTGC CTCTGGAGCA ACCCTCTCTC CTCCAGAGCA ACCCCTGTCC CTCCTTCCTA 001920 001921 CCTCTCTCTA GGGCTGCACC CCCAGCTCAC CTTAGACCTG GCCCTTCCTA CCTGTTGCCC CTACTGTCTT GTCCCATCCC 002000 002001 AGTGGTCAGG AGGGAGAGTA CTGGCCAAAG GCCCAGCTCC ACCTGTGACT TAGGGGAGTG CCAGGCATCA CCCAGAGGTC 002080 002081 CCGGCCCTCG GGGGCCTGGC AGGCTCTGCT GTGGGGGAAG CAGAGTTAGA ACTGGGGCTG CTTCTCCTGT CCCCCAGCCT 002160 002161 GGCTGGGCCT CCCCCACCTC CCTTTCTGCC TGCCCTCTTA CAACTCCAGC AGGGGGCGGG CAGGGGAAAG AAAAGGAGGG 002240 002241 ACAAGTTGGA TGGGGTCCAT TTGGTGTCCA GGAACAACTT GGAGAGAGGC GGGGAGGGGA CAGGCAGCAG GGCCCTGGCA 002320 002321 GAGCCAGGGG AGGGCTGGCC TTTGGATGGC CTTCTGATCC CAAGCCCATC CTCCTGGGGC AGTCTTCCCT TGAAAGGGAG 002400 002401 GGTTTGGTGA ACCCTGGTGC GGACCCCCCC GCCGGACCTC ACTGCCCCAG TGCGGGGCGT GGTAGGCGGG TTTGCAATGG 002480 002481 GTACAGCCTC TCTCTCCATT CCAGTAGAGC AGCTCCCAGG GCCCAGAGAG GCTGTCACTG AGACTTCCCT CTGGGGTGGG 002560 002561 GTGGGTTCTG GTGGCCCTGT GTTCCCCTGC AGGAGGACCT CCTGAGGCTT CGGGCAGGAG CTGGTGCACA CCTGGAGGAG 002640 002641 AGTGCTGGTG AATGGCAGGT GTGTGCCTCA GTGTCCTTGC TGCCAGGGTG TCAGCCCTGC TTCACCACTG GCCGTTTGTC 002720 002721 TCTGTCCCCT CCACTGGCCT CTTGAAGCAC AGAGACCCTC CGGGTACTTT CCTTCCTCTG GGCTTCCACT CATGCTATTC 002800 002801 CCTGCTCCCT TTTTCTACCT GGAGACCCCC ATTCCTCCTC CTCCTCTGCT GCCCTCACCT CCACCTGGGC CCTCCCAGCT 002880 002881 CCCGGGAGAT GGCTGAACCC CACTCCCCAC CCGCTAGTCA TCCTCTTCAG CGGTCCTCCC AGAGCTGTCC TCAGCATGGC 002960 002961 AGCCTCCACA GCCCCTGGGT GTCACCCCCG GTTTCGTGTC TGCCTCGGAC TCCAGACCTG CCCCTCCCAG GCTGGCCCAG 003040 003041 ATGGATCCTC TACAGTGACT AACCCAAACC AGCACCAGGC AGGGACCCAA TAAACCTTTG TGAATGGA |
