Difference between revisions of "NONHSAT101802"
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sequence = <dnaseq>GTGCTGAAGTAGAGGTAGTACAGCATGGCTAGACTGTTGTGAGAGGCTCAGAGAAAGCAGAGGGTGAGATGGATGAGTCCAGCATTCTAAGACGAAGAGGGCTCCAGAAGGAGCTGAGTCTCCCCAGAAGAGGAAGTTTgatagattcccagaagtggaattgcttggtcaaacggtatgtgtatttctaattttaatagctatcactttacccaaaagaatagaaaatcaccttcacccataagaatgcccattttctacattctcaccagcactggatgtcactgcccttaattctttccaatcttattacccctggtcattactttaaattgcatttccttcactaccactgatgttgagtatattttcatatgtttactcttcatttacatttctcttttcttcacttcatgcttattttcactgcccatttttccatttagtagtgtttttctttttcagtttctacaaactattatgtgaaagtattaatccgttgtggtatgtgtgcaaatgtctttgcagtt</dnaseq>| | sequence = <dnaseq>GTGCTGAAGTAGAGGTAGTACAGCATGGCTAGACTGTTGTGAGAGGCTCAGAGAAAGCAGAGGGTGAGATGGATGAGTCCAGCATTCTAAGACGAAGAGGGCTCCAGAAGGAGCTGAGTCTCCCCAGAAGAGGAAGTTTgatagattcccagaagtggaattgcttggtcaaacggtatgtgtatttctaattttaatagctatcactttacccaaaagaatagaaaatcaccttcacccataagaatgcccattttctacattctcaccagcactggatgtcactgcccttaattctttccaatcttattacccctggtcattactttaaattgcatttccttcactaccactgatgttgagtatattttcatatgtttactcttcatttacatttctcttttcttcacttcatgcttattttcactgcccatttttccatttagtagtgtttttctttttcagtttctacaaactattatgtgaaagtattaatccgttgtggtatgtgtgcaaatgtctttgcagtt</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]][[Category:NONHSAG040553]][[Category:Transcripts]] | + | [[Category:Sense]][[Category:NONHSAG040553]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 01:20, 17 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT101802 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
530 nt |
| Genomic location |
chr5+:66124604..66213201 |
| Exon number |
3 |
| Exons |
66124604..66124710,66195779..66195810,66212811..66213201 |
| Genome context |
|
| Sequence |
000001 GTGCTGAAGT AGAGGTAGTA CAGCATGGCT AGACTGTTGT GAGAGGCTCA GAGAAAGCAG AGGGTGAGAT GGATGAGTCC 000080
000081 AGCATTCTAA GACGAAGAGG GCTCCAGAAG GAGCTGAGTC TCCCCAGAAG AGGAAGTTTg atagattccc agaagtggaa 000160 000161 ttgcttggtc aaacggtatg tgtatttcta attttaatag ctatcacttt acccaaaaga atagaaaatc accttcaccc 000240 000241 ataagaatgc ccattttcta cattctcacc agcactggat gtcactgccc ttaattcttt ccaatcttat tacccctggt 000320 000321 cattacttta aattgcattt ccttcactac cactgatgtt gagtatattt tcatatgttt actcttcatt tacatttctc 000400 000401 ttttcttcac ttcatgctta ttttcactgc ccatttttcc atttagtagt gtttttcttt ttcagtttct acaaactatt 000480 000481 atgtgaaagt attaatccgt tgtggtatgt gtgcaaatgt ctttgcagtt |
Predicted Small Protein
| Name | NONHSAT101802_smProtein_68:190 |
| Length | 41 |
| Molecular weight | 4842.6063 |
| Aromaticity | 0.1 |
| Instability index | 99.275 |
| Isoelectric point | 10.1679077148 |
| Runs | 7 |
| Runs residual | 0.00302419354839 |
| Runs probability | 0.0358846241199 |
| Amino acid sequence | MDESSILRRRGLQKELSLPRRGSLIDSQKWNCLVKRYVYF |
| Secondary structure | LLHHHHHHHLLLLLLLLLLLLLLLLLLHHHHHHLLEEEEL |
| PRMN | - |
| PiMo | - |
