Difference between revisions of "NONHSAT035869"
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sequence = <dnaseq>aattgtgggagctaagaacataaaTTACCCCACGACCCAGTTTCCAGCATAGCAGTCAAGTGGTCAGGGAGGCAGAGGTCTGCAGGGAAGGAGAACTCCCAGAGACTCTTATAATGAAACCCCTTCACCGGCTTCAACTCATAGCCTATCTTATAGAACTTCATCTGCCTCCTCTGGACAGGGGATTTTTTCTTTCAGACCATCCCCAAATGGGCATTCAGGCCACACAAGAGTCCTCACCCCCAACAATTTTGCTCAGAGGGAGAGCACAACTACACTAGAGAGTCTTCCTAGTTTCCAGCTACCAGTCCTGCAGACTCTCTACCAACAACGGAGGCATATGGGATTACCCAGTGGGAGAGAAGCATGGACCACTTCTAGATAGATCATCTTCAAGATCTGATCTATACATGCTGCTGAAGGATGGACTGTAGCTTCCAGTACGCATTAGGGGTGATGGCCCTGGAAAATTTACTATTAAATGTTAATTTTCCTTTCTATTGAAAA</dnaseq>| | sequence = <dnaseq>aattgtgggagctaagaacataaaTTACCCCACGACCCAGTTTCCAGCATAGCAGTCAAGTGGTCAGGGAGGCAGAGGTCTGCAGGGAAGGAGAACTCCCAGAGACTCTTATAATGAAACCCCTTCACCGGCTTCAACTCATAGCCTATCTTATAGAACTTCATCTGCCTCCTCTGGACAGGGGATTTTTTCTTTCAGACCATCCCCAAATGGGCATTCAGGCCACACAAGAGTCCTCACCCCCAACAATTTTGCTCAGAGGGAGAGCACAACTACACTAGAGAGTCTTCCTAGTTTCCAGCTACCAGTCCTGCAGACTCTCTACCAACAACGGAGGCATATGGGATTACCCAGTGGGAGAGAAGCATGGACCACTTCTAGATAGATCATCTTCAAGATCTGATCTATACATGCTGCTGAAGGATGGACTGTAGCTTCCAGTACGCATTAGGGGTGATGGCCCTGGAAAATTTACTATTAAATGTTAATTTTCCTTTCTATTGAAAA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:NONHSAG014484]][[Category:Transcripts]] | + | [[Category:Intergenic]][[Category:NONHSAG014484]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 21:33, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT035869 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
507 nt |
| Genomic location |
chr14+:23730515..23742611 |
| Exon number |
8 |
| Exons |
23730515..23730538,23732137..23732179,23733832..23733880,23738133..23738172,23739072..23739169,23739809..23739870,23742032..23742186,23742576..23742611 |
| Genome context |
|
| Sequence |
000001 aattgtggga gctaagaaca taaaTTACCC CACGACCCAG TTTCCAGCAT AGCAGTCAAG TGGTCAGGGA GGCAGAGGTC 000080
000081 TGCAGGGAAG GAGAACTCCC AGAGACTCTT ATAATGAAAC CCCTTCACCG GCTTCAACTC ATAGCCTATC TTATAGAACT 000160 000161 TCATCTGCCT CCTCTGGACA GGGGATTTTT TCTTTCAGAC CATCCCCAAA TGGGCATTCA GGCCACACAA GAGTCCTCAC 000240 000241 CCCCAACAAT TTTGCTCAGA GGGAGAGCAC AACTACACTA GAGAGTCTTC CTAGTTTCCA GCTACCAGTC CTGCAGACTC 000320 000321 TCTACCAACA ACGGAGGCAT ATGGGATTAC CCAGTGGGAG AGAAGCATGG ACCACTTCTA GATAGATCAT CTTCAAGATC 000400 000401 TGATCTATAC ATGCTGCTGA AGGATGGACT GTAGCTTCCA GTACGCATTA GGGGTGATGG CCCTGGAAAA TTTACTATTA 000480 000481 AATGTTAATT TTCCTTTCTA TTGAAAA |
Predicted Small Protein
| Name | NONHSAT035869_smProtein_113:280 |
| Length | 56 |
| Molecular weight | 6296.3317 |
| Aromaticity | 0.0545454545455 |
| Instability index | 53.9727272727 |
| Isoelectric point | 8.41607666016 |
| Runs | 9 |
| Runs residual | 0.0121212121212 |
| Runs probability | 0.0179296944003 |
| Amino acid sequence | MKPLHRLQLIAYLIELHLPPLDRGFFLSDHPQMGIQATQESSPPTILLRGRAQLH |
| Secondary structure | LLLHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLEEELLLLLLLLEEEELLEELL |
| PRMN | - |
| PiMo | - |
