Difference between revisions of "ENST00000566873.1"
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sequence = <dnaseq>ACCTAGACAGATCTCAAAAATGGGAGACCACATGCAAAGGAAACTACGTTTTCACAACACATGGTTGGAGAGGTCAAAGAAAATGTGATGTATTACTTTCAGTTTTATCATCAGCGGGACCATCTGGGGCTAGTGGTGGGGCTCGAAGAAGGAAGAAGAAAATAAAGAAGAGAATCAGATCCCCAAAGTAGAGAGACTGAATTACAGCAATGACCTCGACTTGCATTTACTAGGATGAGCTGTTGTGAGAGTAAATATGAAAGCTGGAATTCATAATTCATTCAACCTGTGTTTCATCCACTTACCCCAAACCAAAACATAACAATCATTGAGCATCCACCATTCACATGTAACTGTGGTGGAGAGAGAGATGAAAAAACACAATGCCTAACCTCAAGGAGTTTACACACTACTCAGAGAGATAAATACCATAGACAAATAATTATACTATACTGTAAGGCTACTTGGGCTAAACCTATACCAAAATCACAAGGACATTGAGGCTCAGTAAGGTGAGATGACTTGCTCCAGATCACACAGGGTTGAAGCTGAAATTTTAATCTAGAGTCCAGTTCCAGAATCTGTGCTTATAAACTGTGCTGTGCTGTATTTGCTTTAAGAATATAAGGGTCATTTCCTGCTTGAATAATCAAGGAAGGCATGATGGAAAAGTTAGGGGCATCATAAAACCCAAAGACAATTCTGATCATATTTTTACTTCAACACTTCTACAGGAAAGAAAGCCTTCCCATCACTAATAGTGAGTTCTCTGGCAGCAAGCCTCAGTCATTGCAGCAGGAATACTGCTTAAATATTATACTGGTATGTGTGGGGTAATTTGAAGTCTACCATCCATCACCATCACCACCAAACCTAATGTATGAGTTGCCTATTCCTTCCCGGGATAGCACACTGCACTACTGAGGATCACTGTTCTATGGAAGTAGTTTTCAAACTTGAGCATGCATAAAAAGAAGAGCGAAGAGGCTTGTTAAATACAGCTCTCTTTCAGCAGGTCTGGGGTACTTACTACTAATGAGCAGTTTTTAGGAAGCATCCTAGATGATTCCGTGTATCCAGGTGGGCCACAGAAACATTTGCAAAAACATTACATCGGAGCCATTGTTGACTATCCCTAATCTGTAAGAAGCCAATAGTCATCGAGACCCAATGGAGCAATGCAGCAGAATGGGGGAAGCCCAGGGGGCAGAGTGAGGGCATCACCAGGTGAGGAAAAGCAAGATGGTAAGGCAGAAGGGAATGGGGAAACCCAAACAATGAAGAAATAGATATCATCTATATATCTATATCTTTCAATTTATCTATATATCCGATTACCAACTTCATCAGGAAAACCTATTTCAGTTTGGTGAATGGAAAGGGAACCAGCCAAAAAATAGTTATTATTTTCATACATCTTAGTATTTTATTTTCCTAAGGACTATCCTCATGAAATATATACATACATTATACATTTACACATATGCATATACATATTTGAGAATACACACACTTTGGCTTCTTAGGCCATCTTAGCTTTATTTTAAATATAAAGAAACTGGTGCTGATTCTGCATATCATATATATTTGACTATACTTCTATAAAGCAGAAGTCAAGAGCCATGATTATTGTGCAACAGTATCTGCACAATTAGAATATTAGCAATAGCACAGTTTTACTTTTGTTTTACAGTTTTCGAACTATAAATCAAGTATGAATGGCTGATGGAAAGCCGAGGCTAGCAAATAGATGATAAACCATGTTACCATGGGAGGTACAGATTCATTTTTAATTTTAGTTTCTATGTTATCCCCAAGCAGCTTTTTTGTATATTGATACGGAAAATAATGCCATCTATATGCTGCACAACAGAAGTGTTGATTTGTTTCTGTACCCCTTGGCTTGCATCCCTGTTGTCATCACCCAGCTGATATCATTGTGACATTTTGACATTGCCTTGTGACACAGTGACCTGGTGCTTCCAGGAGCCTAGAAGGACAAGTTGACTAAGACACATGGTGCATTAGGAAGCAATGAAGCAATTCATTACGGCTACAGAGAGAGTCTGCTCTGGAGACAAGAATTCTTATCTAAAGCACAAAATACTCTCGATTCTATTTGCTGTTCTGCTACTGATTTACTATGAGATCTGTAACAAATAATCTCAATTCATTTGTAACTTAGATTTCCGTCTGTAAAATGGAAATGACCCAACATATGTGATTTTTTTAAAATCCTAGGGCAGTGATTGCATTTGCAACCCATTCTTGCCAAAGAGAAATTCGGAAGCACACTTCAAGGAACTAAGTTCAGTGATAATCACACTTGATTGATTTTCAGTACTGTCACAGTTTGAGAACTATTTATTGCCCTGATTTGCTCTTTTCTCTGCCCTGTATTAAAGATCTTGCATGACAGTTGATCCATGAAA</dnaseq>| | sequence = <dnaseq>ACCTAGACAGATCTCAAAAATGGGAGACCACATGCAAAGGAAACTACGTTTTCACAACACATGGTTGGAGAGGTCAAAGAAAATGTGATGTATTACTTTCAGTTTTATCATCAGCGGGACCATCTGGGGCTAGTGGTGGGGCTCGAAGAAGGAAGAAGAAAATAAAGAAGAGAATCAGATCCCCAAAGTAGAGAGACTGAATTACAGCAATGACCTCGACTTGCATTTACTAGGATGAGCTGTTGTGAGAGTAAATATGAAAGCTGGAATTCATAATTCATTCAACCTGTGTTTCATCCACTTACCCCAAACCAAAACATAACAATCATTGAGCATCCACCATTCACATGTAACTGTGGTGGAGAGAGAGATGAAAAAACACAATGCCTAACCTCAAGGAGTTTACACACTACTCAGAGAGATAAATACCATAGACAAATAATTATACTATACTGTAAGGCTACTTGGGCTAAACCTATACCAAAATCACAAGGACATTGAGGCTCAGTAAGGTGAGATGACTTGCTCCAGATCACACAGGGTTGAAGCTGAAATTTTAATCTAGAGTCCAGTTCCAGAATCTGTGCTTATAAACTGTGCTGTGCTGTATTTGCTTTAAGAATATAAGGGTCATTTCCTGCTTGAATAATCAAGGAAGGCATGATGGAAAAGTTAGGGGCATCATAAAACCCAAAGACAATTCTGATCATATTTTTACTTCAACACTTCTACAGGAAAGAAAGCCTTCCCATCACTAATAGTGAGTTCTCTGGCAGCAAGCCTCAGTCATTGCAGCAGGAATACTGCTTAAATATTATACTGGTATGTGTGGGGTAATTTGAAGTCTACCATCCATCACCATCACCACCAAACCTAATGTATGAGTTGCCTATTCCTTCCCGGGATAGCACACTGCACTACTGAGGATCACTGTTCTATGGAAGTAGTTTTCAAACTTGAGCATGCATAAAAAGAAGAGCGAAGAGGCTTGTTAAATACAGCTCTCTTTCAGCAGGTCTGGGGTACTTACTACTAATGAGCAGTTTTTAGGAAGCATCCTAGATGATTCCGTGTATCCAGGTGGGCCACAGAAACATTTGCAAAAACATTACATCGGAGCCATTGTTGACTATCCCTAATCTGTAAGAAGCCAATAGTCATCGAGACCCAATGGAGCAATGCAGCAGAATGGGGGAAGCCCAGGGGGCAGAGTGAGGGCATCACCAGGTGAGGAAAAGCAAGATGGTAAGGCAGAAGGGAATGGGGAAACCCAAACAATGAAGAAATAGATATCATCTATATATCTATATCTTTCAATTTATCTATATATCCGATTACCAACTTCATCAGGAAAACCTATTTCAGTTTGGTGAATGGAAAGGGAACCAGCCAAAAAATAGTTATTATTTTCATACATCTTAGTATTTTATTTTCCTAAGGACTATCCTCATGAAATATATACATACATTATACATTTACACATATGCATATACATATTTGAGAATACACACACTTTGGCTTCTTAGGCCATCTTAGCTTTATTTTAAATATAAAGAAACTGGTGCTGATTCTGCATATCATATATATTTGACTATACTTCTATAAAGCAGAAGTCAAGAGCCATGATTATTGTGCAACAGTATCTGCACAATTAGAATATTAGCAATAGCACAGTTTTACTTTTGTTTTACAGTTTTCGAACTATAAATCAAGTATGAATGGCTGATGGAAAGCCGAGGCTAGCAAATAGATGATAAACCATGTTACCATGGGAGGTACAGATTCATTTTTAATTTTAGTTTCTATGTTATCCCCAAGCAGCTTTTTTGTATATTGATACGGAAAATAATGCCATCTATATGCTGCACAACAGAAGTGTTGATTTGTTTCTGTACCCCTTGGCTTGCATCCCTGTTGTCATCACCCAGCTGATATCATTGTGACATTTTGACATTGCCTTGTGACACAGTGACCTGGTGCTTCCAGGAGCCTAGAAGGACAAGTTGACTAAGACACATGGTGCATTAGGAAGCAATGAAGCAATTCATTACGGCTACAGAGAGAGTCTGCTCTGGAGACAAGAATTCTTATCTAAAGCACAAAATACTCTCGATTCTATTTGCTGTTCTGCTACTGATTTACTATGAGATCTGTAACAAATAATCTCAATTCATTTGTAACTTAGATTTCCGTCTGTAAAATGGAAATGACCCAACATATGTGATTTTTTTAAAATCCTAGGGCAGTGATTGCATTTGCAACCCATTCTTGCCAAAGAGAAATTCGGAAGCACACTTCAAGGAACTAAGTTCAGTGATAATCACACTTGATTGATTTTCAGTACTGTCACAGTTTGAGAACTATTTATTGCCCTGATTTGCTCTTTTCTCTGCCCTGTATTAAAGATCTTGCATGACAGTTGATCCATGAAA</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:ENSG00000260995.1]][[Category:lnc-GNAQ-2]][[Category:Transcripts]] | + | [[Category:Intergenic]][[Category:ENSG00000260995.1]][[Category:lnc-GNAQ-2]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 17:58, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000566873.1 |
Source |
Gencode19 |
Same with |
lnc-GNAQ-2:2 |
Classification |
intergenic |
Length |
2432 nt |
Genomic location |
chr9-:81750337..81760589 |
Exon number |
5 |
Exons |
81750337..81752092,81753438..81753625,81753703..81753957,81758092..81758146,81760412..81760589 |
Genome context |
|
Sequence |
000001 ACCTAGACAG ATCTCAAAAA TGGGAGACCA CATGCAAAGG AAACTACGTT TTCACAACAC ATGGTTGGAG AGGTCAAAGA 000080
000081 AAATGTGATG TATTACTTTC AGTTTTATCA TCAGCGGGAC CATCTGGGGC TAGTGGTGGG GCTCGAAGAA GGAAGAAGAA 000160 000161 AATAAAGAAG AGAATCAGAT CCCCAAAGTA GAGAGACTGA ATTACAGCAA TGACCTCGAC TTGCATTTAC TAGGATGAGC 000240 000241 TGTTGTGAGA GTAAATATGA AAGCTGGAAT TCATAATTCA TTCAACCTGT GTTTCATCCA CTTACCCCAA ACCAAAACAT 000320 000321 AACAATCATT GAGCATCCAC CATTCACATG TAACTGTGGT GGAGAGAGAG ATGAAAAAAC ACAATGCCTA ACCTCAAGGA 000400 000401 GTTTACACAC TACTCAGAGA GATAAATACC ATAGACAAAT AATTATACTA TACTGTAAGG CTACTTGGGC TAAACCTATA 000480 000481 CCAAAATCAC AAGGACATTG AGGCTCAGTA AGGTGAGATG ACTTGCTCCA GATCACACAG GGTTGAAGCT GAAATTTTAA 000560 000561 TCTAGAGTCC AGTTCCAGAA TCTGTGCTTA TAAACTGTGC TGTGCTGTAT TTGCTTTAAG AATATAAGGG TCATTTCCTG 000640 000641 CTTGAATAAT CAAGGAAGGC ATGATGGAAA AGTTAGGGGC ATCATAAAAC CCAAAGACAA TTCTGATCAT ATTTTTACTT 000720 000721 CAACACTTCT ACAGGAAAGA AAGCCTTCCC ATCACTAATA GTGAGTTCTC TGGCAGCAAG CCTCAGTCAT TGCAGCAGGA 000800 000801 ATACTGCTTA AATATTATAC TGGTATGTGT GGGGTAATTT GAAGTCTACC ATCCATCACC ATCACCACCA AACCTAATGT 000880 000881 ATGAGTTGCC TATTCCTTCC CGGGATAGCA CACTGCACTA CTGAGGATCA CTGTTCTATG GAAGTAGTTT TCAAACTTGA 000960 000961 GCATGCATAA AAAGAAGAGC GAAGAGGCTT GTTAAATACA GCTCTCTTTC AGCAGGTCTG GGGTACTTAC TACTAATGAG 001040 001041 CAGTTTTTAG GAAGCATCCT AGATGATTCC GTGTATCCAG GTGGGCCACA GAAACATTTG CAAAAACATT ACATCGGAGC 001120 001121 CATTGTTGAC TATCCCTAAT CTGTAAGAAG CCAATAGTCA TCGAGACCCA ATGGAGCAAT GCAGCAGAAT GGGGGAAGCC 001200 001201 CAGGGGGCAG AGTGAGGGCA TCACCAGGTG AGGAAAAGCA AGATGGTAAG GCAGAAGGGA ATGGGGAAAC CCAAACAATG 001280 001281 AAGAAATAGA TATCATCTAT ATATCTATAT CTTTCAATTT ATCTATATAT CCGATTACCA ACTTCATCAG GAAAACCTAT 001360 001361 TTCAGTTTGG TGAATGGAAA GGGAACCAGC CAAAAAATAG TTATTATTTT CATACATCTT AGTATTTTAT TTTCCTAAGG 001440 001441 ACTATCCTCA TGAAATATAT ACATACATTA TACATTTACA CATATGCATA TACATATTTG AGAATACACA CACTTTGGCT 001520 001521 TCTTAGGCCA TCTTAGCTTT ATTTTAAATA TAAAGAAACT GGTGCTGATT CTGCATATCA TATATATTTG ACTATACTTC 001600 001601 TATAAAGCAG AAGTCAAGAG CCATGATTAT TGTGCAACAG TATCTGCACA ATTAGAATAT TAGCAATAGC ACAGTTTTAC 001680 001681 TTTTGTTTTA CAGTTTTCGA ACTATAAATC AAGTATGAAT GGCTGATGGA AAGCCGAGGC TAGCAAATAG ATGATAAACC 001760 001761 ATGTTACCAT GGGAGGTACA GATTCATTTT TAATTTTAGT TTCTATGTTA TCCCCAAGCA GCTTTTTTGT ATATTGATAC 001840 001841 GGAAAATAAT GCCATCTATA TGCTGCACAA CAGAAGTGTT GATTTGTTTC TGTACCCCTT GGCTTGCATC CCTGTTGTCA 001920 001921 TCACCCAGCT GATATCATTG TGACATTTTG ACATTGCCTT GTGACACAGT GACCTGGTGC TTCCAGGAGC CTAGAAGGAC 002000 002001 AAGTTGACTA AGACACATGG TGCATTAGGA AGCAATGAAG CAATTCATTA CGGCTACAGA GAGAGTCTGC TCTGGAGACA 002080 002081 AGAATTCTTA TCTAAAGCAC AAAATACTCT CGATTCTATT TGCTGTTCTG CTACTGATTT ACTATGAGAT CTGTAACAAA 002160 002161 TAATCTCAAT TCATTTGTAA CTTAGATTTC CGTCTGTAAA ATGGAAATGA CCCAACATAT GTGATTTTTT TAAAATCCTA 002240 002241 GGGCAGTGAT TGCATTTGCA ACCCATTCTT GCCAAAGAGA AATTCGGAAG CACACTTCAA GGAACTAAGT TCAGTGATAA 002320 002321 TCACACTTGA TTGATTTTCA GTACTGTCAC AGTTTGAGAA CTATTTATTG CCCTGATTTG CTCTTTTCTC TGCCCTGTAT 002400 002401 TAAAGATCTT GCATGACAGT TGATCCATGA AA |