Difference between revisions of "CECR7"
Chunlei Yu (talk | contribs) (Created page with "==Annotated Information== ===Approved Symbol=== CECR7 ===Approved Name=== cat eye syndrome chromosome region, candidate 7 (non-protein coding) ===Previous Symbols=== _ ===Syno...") |
Chunlei Yu (talk | contribs) |
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==Annotated Information== | ==Annotated Information== | ||
===Approved Symbol=== | ===Approved Symbol=== | ||
| − | CECR7 | + | CECR7:cat eye syndrome chromosome region, candidate 7 (non-protein coding) |
| − | |||
| − | cat eye syndrome chromosome region, candidate 7 (non-protein coding) | ||
| − | |||
| − | |||
===Synonyms=== | ===Synonyms=== | ||
SAHL1 | SAHL1 | ||
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===RefSeq ID=== | ===RefSeq ID=== | ||
NR_015352 | NR_015352 | ||
| − | |||
| − | |||
===Ensembl ID=== | ===Ensembl ID=== | ||
ENSG00000237438 | ENSG00000237438 | ||
===pubmed IDs=== | ===pubmed IDs=== | ||
11381032 | 11381032 | ||
| + | ===Disease=== | ||
| + | * cat eye syndrome<ref name="ref1" /> | ||
| + | |||
| + | ==Labs working on this lncRNA== | ||
| + | * Department of Biological Sciences, University of Alberta, Edmonton, Alberta T6G 2E9, Canada. <ref name="ref1" /> | ||
| + | |||
| + | ==References== | ||
| + | <references> | ||
| + | <ref name="ref1">Footz TK, Brinkman-Mills P, Banting GS, Maier SA, Riazi MA, Bridgland L, et al. Analysis of the cat eye syndrome critical region in humans and the region of conserved synteny in mice: a search for candidate genes at or near the human chromosome 22 pericentromere[J]. Genome research. 2001,11(6):1053-70.</ref>(1) | ||
| + | </references> | ||
| + | |||
===Sequence=== | ===Sequence=== | ||
>gi|168229201|ref|NR_015352.1| Homo sapiens cat eye syndrome chromosome region, candidate 7 (non-protein coding) (CECR7), long non-coding RNA | >gi|168229201|ref|NR_015352.1| Homo sapiens cat eye syndrome chromosome region, candidate 7 (non-protein coding) (CECR7), long non-coding RNA | ||
<dnaseq>CTCCCCGGGAAGGAGTGGGTCTGGGTCCAGTCCGCAGGACCCCCTCGCGGATGCTGACGCAGAATGGAGTTGAGGTGGGGGCAGCGCTGGACCCTAGGGCCCCTGCCTGCCTCCTGGGGAGCCCGGTGACCCAGGCAGCCCTGGTGAGGCCGCAGGAGTCTGGGCCCTAGCGACGCCCCCGGGCTCCCACAGGACGAATGTAGACGGTGAGGCCAAGGACGCCCTGCTGCCCTCGGGACTGTCCCTCCAGCCCCCAGCTTTCCGTGGTTATTGGGCCCCCTCTGCAGAGGGGCAGGGGAGCCCACCCTGGATCCTGAGGCGCCGAGCTTGAGGGACCCCAGAGCTCCAGCCAGGCCGCTTTCTTTGCGGATGGTGAAGCTGAGGTCCCGAGGAGGGCAGGGGCAGGTCCCGGGCGCTCCTCAGGCAAAGGGAGCCGATTTAGGGGCTGGGGTCACAGGAGGCGCTTCTGCGACCTCTAGGGCCCTAGAGCCCGGGAGGATGAGAGACTGGGGGCCTTTCGTCCACCCCTGGGGCTGGGCAGACGCTCAGCCTGTGCAACCCGAAGCTGCTTCTGCCCAGTCCCAGCCGCGGCCCCTTTAAGAGGGGGTGGTGCTTCAGCCTGGCGCCAGGGACGCTGCCAGCATGCAGGCCCCGACGGAAGCCGAGACTGCGCTTCGTGCGAGGCCCGGGCAGCATCGGCGGCGTGGTCAGAGCGAGTCTCGGAGAAGATGTGGTGGCTTCCGTTTGTTGGTGGAGGAGGTGGCAGGCCTCGGCGGGTAACCCAGAGAACACAGCCGAAGTGGAATGTGGGGACGTCTGCGACACCGGGGACAGAGCAACTGTGGATGAAGAGGGCTACATCTGGTTCCTGGGGAGGAGTCATGACACTATCAATGCCTCTGGGTGGTGAAGGCATTGATTGTCCTGACCCCACAGTTTCTGTCCCATGACAAGGACCAGCTGACTAAGGAGCTGCAGCAGCATGTAAAGTCAGTGACAGCCCCATGAAACCTCCTCGACACTCCGAAGTCCAGATCGCAGGCCCCACCTGGAATGCTCTCCTTGCAGCCTGTTCGAAGACTCATGAGACCGTGCTGCACACTGGACTTCAACCATGAGCTTCACCGTCTGTCTCTTCCTTCACTACCTTCGCTCTGCACTAGGCCATAAGCTCTGTAGGAGAAGGAACTCATCACAGTGCCTGCCCCAGACAGGTTGTTCATAAGCACGTATTGAAATATAGAATTCCCAGGCACCTCCAACAGAGAGACTGGACCTTGTGAGACCCAACAAGAAGCCAGTATTTCAGAACTGATGAAAAATAGCAAGGATCTAGATTAGGGGGTATAGTGGGAATGAAATGGGGGACTGGGTGATGCCCCATATTTGTCAACGACTCATAGTCTTTCTCCAGAGATGTCTTCCTCCCCTGTGTTCTTTGTCTCATCAGCTGCCACCAGCACTCACTCCAGCCACTAAAGCCAGAAAGTTGAAAGACCTCTGCCCTCATCCGGCCCAGCCCCCATCCAGCCAAAGACCTGTCATTTCAACCTCACGCCCACCCCGCTTTCCACTCCCACTGCTCCTGCCTTAGTTCAGACCACCACCGTCGCTCTCCTACCCAGTTCAAGCCAAGCTGACCTGGCCAGTGGCCTTCAGGCCTTCCCTTCTCCATCCTGCCATGTCCATCCTCCACAGGCAGAACAGGAAGCTGTCATGTAAAAGTGCAGGTCTGCTTTGGTCCTTCTCCTAAACCCTTCAGTGGCTTCCCGGTTCCCTTTGGGTCCTGGTACAGATTCCTTAGCATGGCCAGGGAGGACAGCCCTCCATGATCCTCCCCTCCCTGAGATGTTCCTCCTGCCCCAGCACCCTGTGTTTGAGCCCAAGCCCGCCCTGTGGTGTCACGGGAGGCCCAGCTCCTCTGCCTGGGGTGCCTTGCCTGGCCTAGGAACTGGGAAAACTTACCTGCTTCCAAGACTCAGCTCTAGCACCTCTTCCTGCTGGGTGTTTTCCGATGCCCCCCCTCTCGCCACCTCATGGGGACCCCACAGTCCCCTGAAGAGCCTTCTGCCCCAGTGCCTCACCCCACTCTTTAGACCTGTTTCTGTTTCCATGGCTGCCTTGCCTTCTTAGACCACGGGCTCCTGCAGAGCGGGACCCCATATCTCAGTCGGCTTTGCATTCCCAGTGCCTGGCCGAAACTGAGGCTGGAATGGTCTCCTATTCCATAAGCTCTCAATAACCCTTGAAAAATGACTGGAATCCTGGACAGCGCCAAGGCAGCAACTGGGATGGGAGAGTGATCTGCTGCCCTCTCCTGGCAATGTGAGGAATTGTCCTAAGCACAGACAACTCCCTCCCTGCCTTGCACAAGTGCAGGATGGGGGAAACTGGAAAAGGAGCTGATGGAGGATTGGGGAGGTGGATGCTGTCTAAGGAGACAAACTGAATTGAGGGGTTGCTGGGACTCGGCCGGCTCACATGCTATTCCCATGTCATGGGCCCAGGGGCCAAGTCAGTGCTTCCAAAGGAGGGTGCATCCTGAGAGAGGCTCTGGCTCCCCCAACAAAACCCTAAACTCTTGAAGGACATCTTCCTTCTCAGTATACCCTATTGCTGTGTTGTTGTAACTATCACTGTAACTTTTATTCACTTCAGTGGGCGATCACTGAGTTTTTCCTCCATTGTTGTAAAACATGTGTTTTGCTCTTGTGTGTAAAATGACT</dnaseq> | <dnaseq>CTCCCCGGGAAGGAGTGGGTCTGGGTCCAGTCCGCAGGACCCCCTCGCGGATGCTGACGCAGAATGGAGTTGAGGTGGGGGCAGCGCTGGACCCTAGGGCCCCTGCCTGCCTCCTGGGGAGCCCGGTGACCCAGGCAGCCCTGGTGAGGCCGCAGGAGTCTGGGCCCTAGCGACGCCCCCGGGCTCCCACAGGACGAATGTAGACGGTGAGGCCAAGGACGCCCTGCTGCCCTCGGGACTGTCCCTCCAGCCCCCAGCTTTCCGTGGTTATTGGGCCCCCTCTGCAGAGGGGCAGGGGAGCCCACCCTGGATCCTGAGGCGCCGAGCTTGAGGGACCCCAGAGCTCCAGCCAGGCCGCTTTCTTTGCGGATGGTGAAGCTGAGGTCCCGAGGAGGGCAGGGGCAGGTCCCGGGCGCTCCTCAGGCAAAGGGAGCCGATTTAGGGGCTGGGGTCACAGGAGGCGCTTCTGCGACCTCTAGGGCCCTAGAGCCCGGGAGGATGAGAGACTGGGGGCCTTTCGTCCACCCCTGGGGCTGGGCAGACGCTCAGCCTGTGCAACCCGAAGCTGCTTCTGCCCAGTCCCAGCCGCGGCCCCTTTAAGAGGGGGTGGTGCTTCAGCCTGGCGCCAGGGACGCTGCCAGCATGCAGGCCCCGACGGAAGCCGAGACTGCGCTTCGTGCGAGGCCCGGGCAGCATCGGCGGCGTGGTCAGAGCGAGTCTCGGAGAAGATGTGGTGGCTTCCGTTTGTTGGTGGAGGAGGTGGCAGGCCTCGGCGGGTAACCCAGAGAACACAGCCGAAGTGGAATGTGGGGACGTCTGCGACACCGGGGACAGAGCAACTGTGGATGAAGAGGGCTACATCTGGTTCCTGGGGAGGAGTCATGACACTATCAATGCCTCTGGGTGGTGAAGGCATTGATTGTCCTGACCCCACAGTTTCTGTCCCATGACAAGGACCAGCTGACTAAGGAGCTGCAGCAGCATGTAAAGTCAGTGACAGCCCCATGAAACCTCCTCGACACTCCGAAGTCCAGATCGCAGGCCCCACCTGGAATGCTCTCCTTGCAGCCTGTTCGAAGACTCATGAGACCGTGCTGCACACTGGACTTCAACCATGAGCTTCACCGTCTGTCTCTTCCTTCACTACCTTCGCTCTGCACTAGGCCATAAGCTCTGTAGGAGAAGGAACTCATCACAGTGCCTGCCCCAGACAGGTTGTTCATAAGCACGTATTGAAATATAGAATTCCCAGGCACCTCCAACAGAGAGACTGGACCTTGTGAGACCCAACAAGAAGCCAGTATTTCAGAACTGATGAAAAATAGCAAGGATCTAGATTAGGGGGTATAGTGGGAATGAAATGGGGGACTGGGTGATGCCCCATATTTGTCAACGACTCATAGTCTTTCTCCAGAGATGTCTTCCTCCCCTGTGTTCTTTGTCTCATCAGCTGCCACCAGCACTCACTCCAGCCACTAAAGCCAGAAAGTTGAAAGACCTCTGCCCTCATCCGGCCCAGCCCCCATCCAGCCAAAGACCTGTCATTTCAACCTCACGCCCACCCCGCTTTCCACTCCCACTGCTCCTGCCTTAGTTCAGACCACCACCGTCGCTCTCCTACCCAGTTCAAGCCAAGCTGACCTGGCCAGTGGCCTTCAGGCCTTCCCTTCTCCATCCTGCCATGTCCATCCTCCACAGGCAGAACAGGAAGCTGTCATGTAAAAGTGCAGGTCTGCTTTGGTCCTTCTCCTAAACCCTTCAGTGGCTTCCCGGTTCCCTTTGGGTCCTGGTACAGATTCCTTAGCATGGCCAGGGAGGACAGCCCTCCATGATCCTCCCCTCCCTGAGATGTTCCTCCTGCCCCAGCACCCTGTGTTTGAGCCCAAGCCCGCCCTGTGGTGTCACGGGAGGCCCAGCTCCTCTGCCTGGGGTGCCTTGCCTGGCCTAGGAACTGGGAAAACTTACCTGCTTCCAAGACTCAGCTCTAGCACCTCTTCCTGCTGGGTGTTTTCCGATGCCCCCCCTCTCGCCACCTCATGGGGACCCCACAGTCCCCTGAAGAGCCTTCTGCCCCAGTGCCTCACCCCACTCTTTAGACCTGTTTCTGTTTCCATGGCTGCCTTGCCTTCTTAGACCACGGGCTCCTGCAGAGCGGGACCCCATATCTCAGTCGGCTTTGCATTCCCAGTGCCTGGCCGAAACTGAGGCTGGAATGGTCTCCTATTCCATAAGCTCTCAATAACCCTTGAAAAATGACTGGAATCCTGGACAGCGCCAAGGCAGCAACTGGGATGGGAGAGTGATCTGCTGCCCTCTCCTGGCAATGTGAGGAATTGTCCTAAGCACAGACAACTCCCTCCCTGCCTTGCACAAGTGCAGGATGGGGGAAACTGGAAAAGGAGCTGATGGAGGATTGGGGAGGTGGATGCTGTCTAAGGAGACAAACTGAATTGAGGGGTTGCTGGGACTCGGCCGGCTCACATGCTATTCCCATGTCATGGGCCCAGGGGCCAAGTCAGTGCTTCCAAAGGAGGGTGCATCCTGAGAGAGGCTCTGGCTCCCCCAACAAAACCCTAAACTCTTGAAGGACATCTTCCTTCTCAGTATACCCTATTGCTGTGTTGTTGTAACTATCACTGTAACTTTTATTCACTTCAGTGGGCGATCACTGAGTTTTTCCTCCATTGTTGTAAAACATGTGTTTTGCTCTTGTGTGTAAAATGACT</dnaseq> | ||
Latest revision as of 04:13, 1 July 2016
Contents
Annotated Information
Approved Symbol
CECR7:cat eye syndrome chromosome region, candidate 7 (non-protein coding)
Synonyms
SAHL1
Chromosome
22q11.2
RefSeq ID
NR_015352
Ensembl ID
ENSG00000237438
pubmed IDs
11381032
Disease
- cat eye syndrome[1]
Labs working on this lncRNA
- Department of Biological Sciences, University of Alberta, Edmonton, Alberta T6G 2E9, Canada. [1]
References
- ↑ 1.0 1.1 Footz TK, Brinkman-Mills P, Banting GS, Maier SA, Riazi MA, Bridgland L, et al. Analysis of the cat eye syndrome critical region in humans and the region of conserved synteny in mice: a search for candidate genes at or near the human chromosome 22 pericentromere[J]. Genome research. 2001,11(6):1053-70.
Sequence
>gi|168229201|ref|NR_015352.1| Homo sapiens cat eye syndrome chromosome region, candidate 7 (non-protein coding) (CECR7), long non-coding RNA
000001 CTCCCCGGGA AGGAGTGGGT CTGGGTCCAG TCCGCAGGAC CCCCTCGCGG ATGCTGACGC AGAATGGAGT TGAGGTGGGG 000080
000081 GCAGCGCTGG ACCCTAGGGC CCCTGCCTGC CTCCTGGGGA GCCCGGTGAC CCAGGCAGCC CTGGTGAGGC CGCAGGAGTC 000160
000161 TGGGCCCTAG CGACGCCCCC GGGCTCCCAC AGGACGAATG TAGACGGTGA GGCCAAGGAC GCCCTGCTGC CCTCGGGACT 000240
000241 GTCCCTCCAG CCCCCAGCTT TCCGTGGTTA TTGGGCCCCC TCTGCAGAGG GGCAGGGGAG CCCACCCTGG ATCCTGAGGC 000320
000321 GCCGAGCTTG AGGGACCCCA GAGCTCCAGC CAGGCCGCTT TCTTTGCGGA TGGTGAAGCT GAGGTCCCGA GGAGGGCAGG 000400
000401 GGCAGGTCCC GGGCGCTCCT CAGGCAAAGG GAGCCGATTT AGGGGCTGGG GTCACAGGAG GCGCTTCTGC GACCTCTAGG 000480
000481 GCCCTAGAGC CCGGGAGGAT GAGAGACTGG GGGCCTTTCG TCCACCCCTG GGGCTGGGCA GACGCTCAGC CTGTGCAACC 000560
000561 CGAAGCTGCT TCTGCCCAGT CCCAGCCGCG GCCCCTTTAA GAGGGGGTGG TGCTTCAGCC TGGCGCCAGG GACGCTGCCA 000640
000641 GCATGCAGGC CCCGACGGAA GCCGAGACTG CGCTTCGTGC GAGGCCCGGG CAGCATCGGC GGCGTGGTCA GAGCGAGTCT 000720
000721 CGGAGAAGAT GTGGTGGCTT CCGTTTGTTG GTGGAGGAGG TGGCAGGCCT CGGCGGGTAA CCCAGAGAAC ACAGCCGAAG 000800
000801 TGGAATGTGG GGACGTCTGC GACACCGGGG ACAGAGCAAC TGTGGATGAA GAGGGCTACA TCTGGTTCCT GGGGAGGAGT 000880
000881 CATGACACTA TCAATGCCTC TGGGTGGTGA AGGCATTGAT TGTCCTGACC CCACAGTTTC TGTCCCATGA CAAGGACCAG 000960
000961 CTGACTAAGG AGCTGCAGCA GCATGTAAAG TCAGTGACAG CCCCATGAAA CCTCCTCGAC ACTCCGAAGT CCAGATCGCA 001040
001041 GGCCCCACCT GGAATGCTCT CCTTGCAGCC TGTTCGAAGA CTCATGAGAC CGTGCTGCAC ACTGGACTTC AACCATGAGC 001120
001121 TTCACCGTCT GTCTCTTCCT TCACTACCTT CGCTCTGCAC TAGGCCATAA GCTCTGTAGG AGAAGGAACT CATCACAGTG 001200
001201 CCTGCCCCAG ACAGGTTGTT CATAAGCACG TATTGAAATA TAGAATTCCC AGGCACCTCC AACAGAGAGA CTGGACCTTG 001280
001281 TGAGACCCAA CAAGAAGCCA GTATTTCAGA ACTGATGAAA AATAGCAAGG ATCTAGATTA GGGGGTATAG TGGGAATGAA 001360
001361 ATGGGGGACT GGGTGATGCC CCATATTTGT CAACGACTCA TAGTCTTTCT CCAGAGATGT CTTCCTCCCC TGTGTTCTTT 001440
001441 GTCTCATCAG CTGCCACCAG CACTCACTCC AGCCACTAAA GCCAGAAAGT TGAAAGACCT CTGCCCTCAT CCGGCCCAGC 001520
001521 CCCCATCCAG CCAAAGACCT GTCATTTCAA CCTCACGCCC ACCCCGCTTT CCACTCCCAC TGCTCCTGCC TTAGTTCAGA 001600
001601 CCACCACCGT CGCTCTCCTA CCCAGTTCAA GCCAAGCTGA CCTGGCCAGT GGCCTTCAGG CCTTCCCTTC TCCATCCTGC 001680
001681 CATGTCCATC CTCCACAGGC AGAACAGGAA GCTGTCATGT AAAAGTGCAG GTCTGCTTTG GTCCTTCTCC TAAACCCTTC 001760
001761 AGTGGCTTCC CGGTTCCCTT TGGGTCCTGG TACAGATTCC TTAGCATGGC CAGGGAGGAC AGCCCTCCAT GATCCTC<
000081 GCAGCGCTGG ACCCTAGGGC CCCTGCCTGC CTCCTGGGGA GCCCGGTGAC CCAGGCAGCC CTGGTGAGGC CGCAGGAGTC 000160
000161 TGGGCCCTAG CGACGCCCCC GGGCTCCCAC AGGACGAATG TAGACGGTGA GGCCAAGGAC GCCCTGCTGC CCTCGGGACT 000240
000241 GTCCCTCCAG CCCCCAGCTT TCCGTGGTTA TTGGGCCCCC TCTGCAGAGG GGCAGGGGAG CCCACCCTGG ATCCTGAGGC 000320
000321 GCCGAGCTTG AGGGACCCCA GAGCTCCAGC CAGGCCGCTT TCTTTGCGGA TGGTGAAGCT GAGGTCCCGA GGAGGGCAGG 000400
000401 GGCAGGTCCC GGGCGCTCCT CAGGCAAAGG GAGCCGATTT AGGGGCTGGG GTCACAGGAG GCGCTTCTGC GACCTCTAGG 000480
000481 GCCCTAGAGC CCGGGAGGAT GAGAGACTGG GGGCCTTTCG TCCACCCCTG GGGCTGGGCA GACGCTCAGC CTGTGCAACC 000560
000561 CGAAGCTGCT TCTGCCCAGT CCCAGCCGCG GCCCCTTTAA GAGGGGGTGG TGCTTCAGCC TGGCGCCAGG GACGCTGCCA 000640
000641 GCATGCAGGC CCCGACGGAA GCCGAGACTG CGCTTCGTGC GAGGCCCGGG CAGCATCGGC GGCGTGGTCA GAGCGAGTCT 000720
000721 CGGAGAAGAT GTGGTGGCTT CCGTTTGTTG GTGGAGGAGG TGGCAGGCCT CGGCGGGTAA CCCAGAGAAC ACAGCCGAAG 000800
000801 TGGAATGTGG GGACGTCTGC GACACCGGGG ACAGAGCAAC TGTGGATGAA GAGGGCTACA TCTGGTTCCT GGGGAGGAGT 000880
000881 CATGACACTA TCAATGCCTC TGGGTGGTGA AGGCATTGAT TGTCCTGACC CCACAGTTTC TGTCCCATGA CAAGGACCAG 000960
000961 CTGACTAAGG AGCTGCAGCA GCATGTAAAG TCAGTGACAG CCCCATGAAA CCTCCTCGAC ACTCCGAAGT CCAGATCGCA 001040
001041 GGCCCCACCT GGAATGCTCT CCTTGCAGCC TGTTCGAAGA CTCATGAGAC CGTGCTGCAC ACTGGACTTC AACCATGAGC 001120
001121 TTCACCGTCT GTCTCTTCCT TCACTACCTT CGCTCTGCAC TAGGCCATAA GCTCTGTAGG AGAAGGAACT CATCACAGTG 001200
001201 CCTGCCCCAG ACAGGTTGTT CATAAGCACG TATTGAAATA TAGAATTCCC AGGCACCTCC AACAGAGAGA CTGGACCTTG 001280
001281 TGAGACCCAA CAAGAAGCCA GTATTTCAGA ACTGATGAAA AATAGCAAGG ATCTAGATTA GGGGGTATAG TGGGAATGAA 001360
001361 ATGGGGGACT GGGTGATGCC CCATATTTGT CAACGACTCA TAGTCTTTCT CCAGAGATGT CTTCCTCCCC TGTGTTCTTT 001440
001441 GTCTCATCAG CTGCCACCAG CACTCACTCC AGCCACTAAA GCCAGAAAGT TGAAAGACCT CTGCCCTCAT CCGGCCCAGC 001520
001521 CCCCATCCAG CCAAAGACCT GTCATTTCAA CCTCACGCCC ACCCCGCTTT CCACTCCCAC TGCTCCTGCC TTAGTTCAGA 001600
001601 CCACCACCGT CGCTCTCCTA CCCAGTTCAA GCCAAGCTGA CCTGGCCAGT GGCCTTCAGG CCTTCCCTTC TCCATCCTGC 001680
001681 CATGTCCATC CTCCACAGGC AGAACAGGAA GCTGTCATGT AAAAGTGCAG GTCTGCTTTG GTCCTTCTCC TAAACCCTTC 001760
001761 AGTGGCTTCC CGGTTCCCTT TGGGTCCTGG TACAGATTCC TTAGCATGGC CAGGGAGGAC AGCCCTCCAT GATCCTC<