Difference between revisions of "ERICH1-AS1"
Chunlei Yu (talk | contribs) (Created page with "==Annotated Information== ===Approved Symbol=== ERICH1-AS1 ===Approved Name=== ERICH1 antisense RNA 1 ===Previous Symbols=== C8orf68 ===Synonyms=== _ ===Chromosome=== 8p23.3 =...") |
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26393913 | 26393913 | ||
===Sequence=== | ===Sequence=== | ||
| − | + | >gi|410442564|ref|NR_073397.1| Homo sapiens ERICH1 antisense RNA 1 (ERICH1-AS1), long non-coding RNA | |
<dnaseq>GAGTGCGCAGGCGCCGGCCGTGAAGACCGACCGTGCGCCGGGCTCGAGCGCGGTCTGAGCGCGCGGCGCCTGCGGCGGCGAACGGACGGACGGACCGCGGACGGACGTACTGACCCCAACCCGCGAGCCCCGGGAGCCGTCGGTCTGAGGAGGGGCCGCTTCGCCATGTCGCCCCGCACCTGCTGAGCCCGGAGCGTCCGAGGATGTCCGCGCTGAGGAAGGCTTTCTCGCCATCCGAGGCTTGGCCCTAGCCCTGCGCGGCTTCCCTCGCGGCTGCTAACCCTCTGCCTGCGCCCAGCCCAGCCACAATGGGGACTGCTCAGGTTTTGCCTGGCATTCTGCAGAAGCATTGCTGTATCTTACCAGACAGGAATACAGGCCGTCTCCAAACTATAGTCCTATTGGACTGGTGCACCAAATATGGATTTGGGGTGTGCGTAATTCAGTCCATAGCACCCACCAAACCACAGAAGCTGCCCCGAGCTGATGTCCCGCTATCGGTGCGGCTGCAGGACACTGTCCCATTGCTGCATGGAGCCTCTCGCTGTCTGAGCCTCACCTGAAGCCGGCCCACACCATTTTCTTACTCTATGCATTGGAGCGAAAATGTTTAATTGACTACGATGGGTGATTCCTAAAGTTATATTTGACTCAGAAAAAAATGCATTAGTAAAACTCCCTGTTTGAATGTTTCTAGTATTCACAGCCCGGGTCACTGTCTTTCTATAACGATTGGTATCTGAAATAAGAACATGGGCTGCAACTTACAGCCTTGCTCTTTCTACTATATAAACTTCCCTAATCAAATATTTTTCATTAAAAAAATGTGTTTTTGGAAATAAACAGTTACAACCTGGAAAAAAAAAAAAAAA</dnaseq> | <dnaseq>GAGTGCGCAGGCGCCGGCCGTGAAGACCGACCGTGCGCCGGGCTCGAGCGCGGTCTGAGCGCGCGGCGCCTGCGGCGGCGAACGGACGGACGGACCGCGGACGGACGTACTGACCCCAACCCGCGAGCCCCGGGAGCCGTCGGTCTGAGGAGGGGCCGCTTCGCCATGTCGCCCCGCACCTGCTGAGCCCGGAGCGTCCGAGGATGTCCGCGCTGAGGAAGGCTTTCTCGCCATCCGAGGCTTGGCCCTAGCCCTGCGCGGCTTCCCTCGCGGCTGCTAACCCTCTGCCTGCGCCCAGCCCAGCCACAATGGGGACTGCTCAGGTTTTGCCTGGCATTCTGCAGAAGCATTGCTGTATCTTACCAGACAGGAATACAGGCCGTCTCCAAACTATAGTCCTATTGGACTGGTGCACCAAATATGGATTTGGGGTGTGCGTAATTCAGTCCATAGCACCCACCAAACCACAGAAGCTGCCCCGAGCTGATGTCCCGCTATCGGTGCGGCTGCAGGACACTGTCCCATTGCTGCATGGAGCCTCTCGCTGTCTGAGCCTCACCTGAAGCCGGCCCACACCATTTTCTTACTCTATGCATTGGAGCGAAAATGTTTAATTGACTACGATGGGTGATTCCTAAAGTTATATTTGACTCAGAAAAAAATGCATTAGTAAAACTCCCTGTTTGAATGTTTCTAGTATTCACAGCCCGGGTCACTGTCTTTCTATAACGATTGGTATCTGAAATAAGAACATGGGCTGCAACTTACAGCCTTGCTCTTTCTACTATATAAACTTCCCTAATCAAATATTTTTCATTAAAAAAATGTGTTTTTGGAAATAAACAGTTACAACCTGGAAAAAAAAAAAAAAA</dnaseq> | ||
Latest revision as of 11:57, 23 June 2016
Contents
Annotated Information
Approved Symbol
ERICH1-AS1
Approved Name
ERICH1 antisense RNA 1
Previous Symbols
C8orf68
Synonyms
_
Chromosome
8p23.3
RefSeq ID
NR_073397
OMIM ID
_
Ensembl ID
ENSG00000237647
pubmed IDs
26393913
Sequence
>gi|410442564|ref|NR_073397.1| Homo sapiens ERICH1 antisense RNA 1 (ERICH1-AS1), long non-coding RNA
000001 GAGTGCGCAG GCGCCGGCCG TGAAGACCGA CCGTGCGCCG GGCTCGAGCG CGGTCTGAGC GCGCGGCGCC TGCGGCGGCG 000080
000081 AACGGACGGA CGGACCGCGG ACGGACGTAC TGACCCCAAC CCGCGAGCCC CGGGAGCCGT CGGTCTGAGG AGGGGCCGCT 000160
000161 TCGCCATGTC GCCCCGCACC TGCTGAGCCC GGAGCGTCCG AGGATGTCCG CGCTGAGGAA GGCTTTCTCG CCATCCGAGG 000240
000241 CTTGGCCCTA GCCCTGCGCG GCTTCCCTCG CGGCTGCTAA CCCTCTGCCT GCGCCCAGCC CAGCCACAAT GGGGACTGCT 000320
000321 CAGGTTTTGC CTGGCATTCT GCAGAAGCAT TGCTGTATCT TACCAGACAG GAATACAGGC CGTCTCCAAA CTATAGTCCT 000400
000401 ATTGGACTGG TGCACCAAAT ATGGATTTGG GGTGTGCGTA ATTCAGTCCA TAGCACCCAC CAAACCACAG AAGCTGCCCC 000480
000481 GAGCTGATGT CCCGCTATCG GTGCGGCTGC AGGACACTGT CCCATTGCTG CATGGAGCCT CTCGCTGTCT GAGCCTCACC 000560
000561 TGAAGCCGGC CCACACCATT TTCTTACTCT ATGCATTGGA GCGAAAATGT TTAATTGACT ACGATGGGTG ATTCCTAAAG 000640
000641 TTATATTTGA CTCAGAAAAA AATGCATTAG TAAAACTCCC TGTTTGAATG TTTCTAGTAT TCACAGCCCG GGTCACTGTC 000720
000721 TTTCTATAAC GATTGGTATC TGAAATAAGA ACATGGGCTG CAACTTACAG CCTTGCTCTT TCTACTATAT AAACTTCCCT 000800
000801 AATCAAATAT TTTTCATTAA AAAAATGTGT TTTTGGAAAT AAACAGTTAC AACCTGGAAA AAAAAAAAAA AA
000081 AACGGACGGA CGGACCGCGG ACGGACGTAC TGACCCCAAC CCGCGAGCCC CGGGAGCCGT CGGTCTGAGG AGGGGCCGCT 000160
000161 TCGCCATGTC GCCCCGCACC TGCTGAGCCC GGAGCGTCCG AGGATGTCCG CGCTGAGGAA GGCTTTCTCG CCATCCGAGG 000240
000241 CTTGGCCCTA GCCCTGCGCG GCTTCCCTCG CGGCTGCTAA CCCTCTGCCT GCGCCCAGCC CAGCCACAAT GGGGACTGCT 000320
000321 CAGGTTTTGC CTGGCATTCT GCAGAAGCAT TGCTGTATCT TACCAGACAG GAATACAGGC CGTCTCCAAA CTATAGTCCT 000400
000401 ATTGGACTGG TGCACCAAAT ATGGATTTGG GGTGTGCGTA ATTCAGTCCA TAGCACCCAC CAAACCACAG AAGCTGCCCC 000480
000481 GAGCTGATGT CCCGCTATCG GTGCGGCTGC AGGACACTGT CCCATTGCTG CATGGAGCCT CTCGCTGTCT GAGCCTCACC 000560
000561 TGAAGCCGGC CCACACCATT TTCTTACTCT ATGCATTGGA GCGAAAATGT TTAATTGACT ACGATGGGTG ATTCCTAAAG 000640
000641 TTATATTTGA CTCAGAAAAA AATGCATTAG TAAAACTCCC TGTTTGAATG TTTCTAGTAT TCACAGCCCG GGTCACTGTC 000720
000721 TTTCTATAAC GATTGGTATC TGAAATAAGA ACATGGGCTG CAACTTACAG CCTTGCTCTT TCTACTATAT AAACTTCCCT 000800
000801 AATCAAATAT TTTTCATTAA AAAAATGTGT TTTTGGAAAT AAACAGTTAC AACCTGGAAA AAAAAAAAAA AA
Predicted Small Protein
| Name | ERICH1-AS1_smProtein_308:562 |
| Length | 84 |
| Molecular weight | 9165.8225 |
| Aromaticity | 0.0357142857143 |
| Instability index | 42.1130952381 |
| Isoelectric point | 9.26019287109 |
| Runs | 14 |
| Runs residual | 0.0326812253564 |
| Runs probability | 0.0465023847376 |
| Amino acid sequence | MGTAQVLPGILQKHCCILPDRNTGRLQTIVLLDWCTKYGFGVCVIQSIAPTKPQKLPRAD VPLSVRLQDTVPLLHGASRCLSLT |
| Secondary structure | LLLLLLLHHHHHHLLEEELLLLLLLEEEEEEEEHHHLLLLEEEEEEEELLLLLLLLLLLL LLLEEEELLLLLLLLLLLLEELLL |
| PRMN | - |
| PiMo | - |
