Difference between revisions of "FEZF1-AS1"
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==Annotated Information== | ==Annotated Information== | ||
| − | === | + | ===Name=== |
| − | FEZF1-AS1 | + | FEZF1-AS1:FEZF1 antisense RNA 1<ref name="ref1" /> |
| − | === | + | |
| − | FEZF1 | + | ===Characteristics=== |
| − | + | FEZF1-AS1 is a conserved ~2.6-kb RNA transcribed from the plus strand of chromosome 7, on the opposite strand of the gene coding FEZF1 protein (7q31.32), including 611 nucleotides of full complementarity between the frst FEZF1-AS1 exon and FEZF1 exons 1 <ref name="ref1" />. | |
| − | + | ||
| − | + | It belongs to the category of "Antisense" in lncRNA classification. | |
| − | + | ===Cellular Localization=== | |
| − | === | ||
7q31.32 | 7q31.32 | ||
| − | === | + | |
| − | + | ===Function=== | |
| − | + | Downregulation of FEZF1-AS1 expression signifcantly inhibited the CRC cells proliferation, migration and invasiveness, suppressed S-phase entry in vitro, repressed tumor growth and metastasis in vivo, and also reduced its sense-cognate gene FEZF1 mRNA and protein expression in CRC cells<ref name="ref1" />. | |
| − | + | ||
| − | === | + | ===Regulation=== |
| − | + | The expression of FEZF1 might be regulated by FEZF1-AS1<ref name="ref1" />. | |
| − | + | ||
| − | " | ||
===Disease=== | ===Disease=== | ||
| − | Colorectal carcinoma | + | *Colorectal carcinoma<ref name="ref1" /> |
| + | *Gastric cancer | ||
| + | |||
| + | |||
| + | ===Sequence=== | ||
| + | >NR_036484.1 Homo sapiens FEZF1 antisense RNA 1 (FEZF1-AS1), long non-coding RNA | ||
| + | <dnaseq>GAAAACTTTGGGCTTGGCATTAGGAGAGCCTCGGCTGAAATCCGAGGTTTTGAACGCGATTTTTTCCGAC | ||
| + | AGAAGCTGGGCGCTTTCTTTCATGTAATGCTGCAGCTGAGCCTGGGACAGGTCTTTGAAAGCTACTCCAG | ||
| + | AAGGGTATTTCTCCACCGCCGGGACCACCAGTTTATTCCTTTCGGCTAAATACGTTTTTGGCTGCGGGTG | ||
| + | CAAAGGGGAACTGAGGAAGTAGGAGGCCACCGGGTGGATGTTCACGCCGGCTGCCGGGTGGCATGGGCCG | ||
| + | TCACCTCGGTTCAGGTAGCACAAGGCGCCCATGGCGTGGAATGAAGAGTGGTTGACCACACGCGGCCTTA | ||
| + | CCAGCTTGTACTGCTGCAGCGGCAGCGCGTCGCGGGCCAGGTCGCCCTTGAGACTCAGTGCGCAGTTGAG | ||
| + | CAGGTCGCTGCAGCTGAATGCGGGAGCCGAGGGCACCGCCGCGGGCGCCGCCGGGGCCTCCAGACTGGCC | ||
| + | TTCCGCGGCTCGGAGCCCGTCACTCCTGCCTTGGGGCTCGTGTCGTAGGCCACAGGCACGAAGGGGATCA | ||
| + | TGCAGGGGATCGACGAGTTGAGATGCAGAGAGTGCTTGGGTTCCCCCTTGGCATCACCAGCCGAACCTGC | ||
| + | CTGCCCAGCCCAATGGACTCCTGCCAGCCCATCGCAGAGTTCTTGGCGCACCAATGACTCGGGGACAATC | ||
| + | ACTACTTATTTCTATCAATAGAAAGTGTTGTGTCAATAACGCAGCCAAGATCTCGCCAATCGTTAACTTC | ||
| + | CAAGAGGAGAAGGGCTCGGGGTTGCCCGCTCCCGGAATCCCGGAGTCTCCGCGGCCCGAACCGAGTCTGG | ||
| + | ACCATTTAGAAGACGCCGGCAGGTAACTGGCCTCCCCAAACGCCCCGAAAATTAAAAGCCTTAGGAGGCT | ||
| + | TGTTCTGTGTTTGTGGTTTTGTAAAGGCAATGCCCGCGGCAATAGGCCTGGGAAAGTCGCACTTTCATCC | ||
| + | ACAAAGTTGAGGAGTTGCAAGGAATAATTGGGTGTCACACCACAAGCAACCTTGACTCGATCGGACCCCA | ||
| + | CCCAGGATACACACAGACGCGCGCGCGCGCACGCTTCCGAGTTTCCATTGAGAGTCTGGAAAGAGCATTT | ||
| + | CTTTCTTAAGTACCTGCGCTCAGCTAGAGCTCTCCCGGAGCATTTTAAATACTGAATGCCGAGCGGAGAA | ||
| + | GGGAAACAGAGTGTATTAATCCCCACTCCGGTTGCCGGTGTCTGCAAGCCTCCTCTAAGCAGCGCAGGCG | ||
| + | GCAGCCTGGATGTCTGTGCGCATCAAGGAGACTTGCCGGCGCCAGAGTTGTGTCCACAGGTGCACTTGTG | ||
| + | CCTCCCAAAGAGCGCGCGTAGAGACCATTTCCCCTGCAACGCCCCCCAGCCGAACACCCGCCGGGTGTGG | ||
| + | CACCTCGGCCGAAACTCCTGGGGCGGCGCGGTGGAGCGTGTGGAGGTTTCCGGGAAGACGCCTACGGCTG | ||
| + | CGGCTCCGACTGTGCGGGCTCCCGCCGCCCAGGCAAGAGCGTCCAGGAGCGCGCTGGAAGCTGCGGCGCG | ||
| + | CACCTTCCCCGGCGCAGTCTCTTGCCAGCCGGCGATCACGCAGAGCTGAACCCCGCAGCTAGGCGCGCAG | ||
| + | GAAGGGCTGCACAGAGTTTGAAGACACGGCAGCTGTAAGCTGGCGTGAGGAGGCCAAAGGAGCGCGCAGA | ||
| + | GCTGCAAGCAAAGGGCGGTGGGGCCTGGACCCTGAAGTGAGTGGCCGACCGCAGCAGCTCAAGGTGCCAT | ||
| + | CTGCCTGGCAAGCTACCCGGGTCCCTCCGCCCCACTCTAACTTTCCGCGAAAATCAGTTCCGCCTCTGCC | ||
| + | CCAAGAGCCAAGAGGGGTGGAAAGGAAGAGAGCTTGGGCTGGGAACGCGCCTGATGTCTAACAGAAAGGC | ||
| + | AGTGGCAGCTGGCGAAAAATCCCCCTCCTGCTGCACTCCTCCGCCACCGGGCTAGGTTGAAAGGAAAAAG | ||
| + | CCAAGAAGCGCGAAGCAGCCCGGCTCTGGAAGGCTTTGGAGAGTCCAGCTGACTTGTACACAATTCGCGG | ||
| + | CCTCTGGAGCCTTACCTGCCTTCTTGACTGAATGCCACCAGTTCGTTTTACGCTTGTGGCTTTTTGTTGA | ||
| + | AGTCCCTATCATAAGCAAATGCAGTTTCTGGCTATGGTTACTGCAATTCGAAATAAAAGGCCTGTGAGGT | ||
| + | GTGTCCCTCCAGACTGAGAGGCTATGACTCAGGGTTGGACTTTATGGAAAAAAAGAAGTTTATAAAACAA | ||
| + | GTAACCCAGTTTCTCCAACCTTTACTGTGGAGCAACAGCGTCAAGCAACAAAACCCAGCAAAGTTTTGCT | ||
| + | TGTCACTTACAAGGGTGTTACTGAAATCTGGAAGGCGAACAATTAGAAGATAGCCCAAACATGCTCTATT | ||
| + | GCTCTACACTGAAATACTTGCCTCCAATAATAGAAAAAACCTGTTTTCGTGCAATTGATTGATTAGCGTT | ||
| + | CTGCAGCAGTCCCTGGACAATTTTAAAGACATTTTGTGTTTGTGGCCAAAATTAGAAACAAGCAGACACA | ||
| + | CACACAAAACAACCATATTCAAGACACGGTTCGACTGTTTCCTTGACACTACCCACGAAGTTTAAAGCAT | ||
| + | TTTTTATGTTATTTTCAAACTTTCTTAAGTGATCCCATGAAATAAAAGTCGATAATAGAAATT</dnaseq> | ||
| + | |||
| + | |||
| + | ==Labs working on this lncRNA== | ||
| + | *Department of Pathology, Nanfang Hospital, Southern Medical University, Guangzhou 510515, China. | ||
| + | *Department of Pathology, School of Basic Medical Sciences, Southern Medical University, Guangzhou 510515, China | ||
| + | *Department of Pharmacy, Nanfang Hospital, Southern Medical University, Guangzhou 510515, China.<ref name="ref1" /> | ||
| + | |||
| + | |||
| + | |||
| + | ==References== | ||
| + | <references> | ||
| + | <ref name="ref1"> | ||
| + | Chen N, Guo D, Xu Q, Yang M, Wang D, Peng M, Ding Y, Wang S, Zhou J. Long | ||
| + | non-coding RNA FEZF1-AS1 facilitates cell proliferation and migration in | ||
| + | colorectal carcinoma. Oncotarget. 2016 Mar 8;7(10):11271-83. | ||
| + | </ref> | ||
| + | </references> | ||
| + | |||
| + | |||
| + | |||
| + | |||
| + | [[Category: Antisense]] | ||
Revision as of 02:36, 20 July 2017
Contents
Annotated Information
Name
FEZF1-AS1:FEZF1 antisense RNA 1[1]
Characteristics
FEZF1-AS1 is a conserved ~2.6-kb RNA transcribed from the plus strand of chromosome 7, on the opposite strand of the gene coding FEZF1 protein (7q31.32), including 611 nucleotides of full complementarity between the frst FEZF1-AS1 exon and FEZF1 exons 1 [1].
It belongs to the category of "Antisense" in lncRNA classification.
Cellular Localization
7q31.32
Function
Downregulation of FEZF1-AS1 expression signifcantly inhibited the CRC cells proliferation, migration and invasiveness, suppressed S-phase entry in vitro, repressed tumor growth and metastasis in vivo, and also reduced its sense-cognate gene FEZF1 mRNA and protein expression in CRC cells[1].
Regulation
The expression of FEZF1 might be regulated by FEZF1-AS1[1].
Disease
- Colorectal carcinoma[1]
- Gastric cancer
Sequence
>NR_036484.1 Homo sapiens FEZF1 antisense RNA 1 (FEZF1-AS1), long non-coding RNA
000001 GAAAACTTTG GGCTTGGCAT TAGGAGAGCC TCGGCTGAAA TCCGAGGTTT TGAACGCGAT TTTTTCCGAC AGAAGCTGGG 000080
000081 CGCTTTCTTT CATGTAATGC TGCAGCTGAG CCTGGGACAG GTCTTTGAAA GCTACTCCAG AAGGGTATTT CTCCACCGCC 000160
000161 GGGACCACCA GTTTATTCCT TTCGGCTAAA TACGTTTTTG GCTGCGGGTG CAAAGGGGAA CTGAGGAAGT AGGAGGCCAC 000240
000241 CGGGTGGATG TTCACGCCGG CTGCCGGGTG GCATGGGCCG TCACCTCGGT TCAGGTAGCA CAAGGCGCCC ATGGCGTGGA 000320
000321 ATGAAGAGTG GTTGACCACA CGCGGCCTTA CCAGCTTGTA CTGCTGCAGC GGCAGCGCGT CGCGGGCCAG GTCGCCCTTG 000400
000401 AGACTCAGTG CGCAGTTGAG CAGGTCGCTG CAGCTGAATG CGGGAGCCGA GGGCACCGCC GCGGGCGCCG CCGGGGCCTC 000480
000481 CAGACTGGCC TTCCGCGGCT CGGAGCCCGT CACTCCTGCC TTGGGGCTCG TGTCGTAGGC CACAGGCACG AAGGGGATCA 000560
000561 TGCAGGGGAT CGACGAGTTG AGATGCAGAG AGTGCTTGGG TTCCCCCTTG GCATCACCAG CCGAACCTGC CTGCCCAGCC 000640
000641 CAATGGACTC CTGCCAGCCC ATCGCAGAGT TCTTGGCGCA CCAATGACTC GGGGACAATC ACTACTTATT TCTATCAATA 000720
000721 GAAAGTGTTG TGTCAATAAC GCAGCCAAGA TCTCGCCAAT CGTTAACTTC CAAGAGGAGA AGGGCTCGGG GTTGCCCGCT 000800
000801 CCCGGAATCC CGGAGTCTCC GCGGCCCGAA CCGAGTCTGG ACCATTTAGA AGACGCCGGC AGGTAACTGG CCTCCCCAAA 000880
000881 CGCCCCGAAA ATTAAAAGCC TTAGGAGGCT TGTTCTGTGT TTGTGGTTTT GTAAAGGCAA TGCCCGCGGC AATAGGCCTG 000960
000961 GGAAAGTCGC ACTTTCATCC ACAAAGTTGA GGAGTTGCAA GGAATAATTG GGTGTCACAC CACAAGCAAC CTTGACTCGA 001040
001041 TCGGACCCCA CCCAGGATAC ACACAGACGC GCGCGCGCGC ACGCTTCCGA GTTTCCATTG AGAGTCTGGA AAGAGCATTT 001120
001121 CTTTCTTAAG TACCTGCGCT CAGCTAGAGC TCTCCCGGAG CATTTTAAAT ACTGAATGCC GAGCGGAGAA GGGAAACAGA 001200
001201 GTGTATTAAT CCCCACTCCG GTTGCCGGTG TCTGCAAGCC TCCTCTAAGC AGCGCAGGCG GCAGCCTGGA TGTCTGTGCG 001280
001281 CATCAAGGAG ACTTGCCGGC GCCAGAGTTG TGTCCACAGG TGCACTTGTG CCTCCCAAAG AGCGCGCGTA GAGACCATTT 001360
001361 CCCCTGCAAC GCCCCCCAGC CGAACACCCG CCGGGTGTGG CACCTCGGCC GAAACTCCTG GGGCGGCGCG GTGGAGCGTG 001440
001441 TGGAGGTTTC CGGGAAGACG CCTACGGCTG CGGCTCCGAC TGTGCGGGCT CCCGCCGCCC AGGCAAGAGC GTCCAGGAGC 001520
001521 GCGCTGGAAG CTGCGGCGCG CACCTTCCCC GGCGCAGTCT CTTGCCAGCC GGCGATCACG CAGAGCTGAA CCCCGCAGCT 001600
001601 AGGCGCGCAG GAAGGGCTGC ACAGAGTTTG AAGACACGGC AGCTGTAAGC TGGCGTGAGG AGGCCAAAGG AGCGCGCAGA 001680
001681 GCTGCAAGCA AAGGGCGGTG GGGCCTGGAC CCTGAAGTGA GTGGCCGACC GCAGCAGCTC AAGGTGCCAT CTGCCTGGCA 001760
001761 AGCTACCCGG GTCCCTCCGC CCCACTCTAA CTTTCCGCGA AAATCAGTTC CGCCTCTGCC CCAAGAGCCA AGAGGGGTGG 001840
001841 AAAGGAAGAG AGCTTGGGCT GGGAACGCGC CTGATGTCTA ACAGAAAGGC AGTGGCAGCT GGCGAAAAAT CCCCCTCCTG 001920
001921 CTGCACTCCT CCGCCACCGG GCTAGGTTGA AAGGAAAAAG CCAAGAAGCG CGAAGCAGCC CGGCTCTGGA AGGCTTTGGA 002000
002001 GAGTCCAGCT GACTTGTACA CAATTCGCGG CCTCTGGAGC CTTACCTGCC TTCTTGACTG AATGCCACCA GTTCGTTTTA 002080
002081 CGCTTGTGGC TTTTTGTTGA AGTCCCTATC ATAAGCAAAT GCAGTTTCTG GCTATGGTTA CTGCAATTCG AAATAAAAGG 002160
002161 CCTGTGAGGT GTGTCCCTCC AGACTGAGAG GCTATGACTC AGGGTTGGAC TTTATGGAAA AAAAGAAGTT TATAAAACAA 002240
002241 GTAACCCAGT TTCTCCAACC TTTACTGTGG AGCAACAGCG TCAAGCAACA AAACCCAGCA AAGTTTTGCT TGTCACTTAC 002320
002321 AAGGGTGTTA CTGAAATCTG GAAGGCGAAC AATTAGAAGA TAGCCCAAAC ATGCTCTATT GCTCTACACT GAAATACTTG 002400
002401 CCTCCAATAA TAGAAAAAAC CTGTTTTCGT GCAATTGATT GATTAGCGTT CTGCAGCAGT CCCTGGACAA TTTTAAAGAC 002480
002481 ATTTTGTGTT TGTGGCCAAA ATTAGAAACA AGCAGACACA CACACAAAAC AACCATATTC AAGACACGGT TCGACTGTTT 002560
002561 CCTTGACACT ACCCACGAAG TTTAAAGCAT TTTTTATGTT ATTTTCAAAC TTTCTTAAGT GATCCCATGA AATAAAAGTC 002640
002641 GATAATAGAA ATT
000081 CGCTTTCTTT CATGTAATGC TGCAGCTGAG CCTGGGACAG GTCTTTGAAA GCTACTCCAG AAGGGTATTT CTCCACCGCC 000160
000161 GGGACCACCA GTTTATTCCT TTCGGCTAAA TACGTTTTTG GCTGCGGGTG CAAAGGGGAA CTGAGGAAGT AGGAGGCCAC 000240
000241 CGGGTGGATG TTCACGCCGG CTGCCGGGTG GCATGGGCCG TCACCTCGGT TCAGGTAGCA CAAGGCGCCC ATGGCGTGGA 000320
000321 ATGAAGAGTG GTTGACCACA CGCGGCCTTA CCAGCTTGTA CTGCTGCAGC GGCAGCGCGT CGCGGGCCAG GTCGCCCTTG 000400
000401 AGACTCAGTG CGCAGTTGAG CAGGTCGCTG CAGCTGAATG CGGGAGCCGA GGGCACCGCC GCGGGCGCCG CCGGGGCCTC 000480
000481 CAGACTGGCC TTCCGCGGCT CGGAGCCCGT CACTCCTGCC TTGGGGCTCG TGTCGTAGGC CACAGGCACG AAGGGGATCA 000560
000561 TGCAGGGGAT CGACGAGTTG AGATGCAGAG AGTGCTTGGG TTCCCCCTTG GCATCACCAG CCGAACCTGC CTGCCCAGCC 000640
000641 CAATGGACTC CTGCCAGCCC ATCGCAGAGT TCTTGGCGCA CCAATGACTC GGGGACAATC ACTACTTATT TCTATCAATA 000720
000721 GAAAGTGTTG TGTCAATAAC GCAGCCAAGA TCTCGCCAAT CGTTAACTTC CAAGAGGAGA AGGGCTCGGG GTTGCCCGCT 000800
000801 CCCGGAATCC CGGAGTCTCC GCGGCCCGAA CCGAGTCTGG ACCATTTAGA AGACGCCGGC AGGTAACTGG CCTCCCCAAA 000880
000881 CGCCCCGAAA ATTAAAAGCC TTAGGAGGCT TGTTCTGTGT TTGTGGTTTT GTAAAGGCAA TGCCCGCGGC AATAGGCCTG 000960
000961 GGAAAGTCGC ACTTTCATCC ACAAAGTTGA GGAGTTGCAA GGAATAATTG GGTGTCACAC CACAAGCAAC CTTGACTCGA 001040
001041 TCGGACCCCA CCCAGGATAC ACACAGACGC GCGCGCGCGC ACGCTTCCGA GTTTCCATTG AGAGTCTGGA AAGAGCATTT 001120
001121 CTTTCTTAAG TACCTGCGCT CAGCTAGAGC TCTCCCGGAG CATTTTAAAT ACTGAATGCC GAGCGGAGAA GGGAAACAGA 001200
001201 GTGTATTAAT CCCCACTCCG GTTGCCGGTG TCTGCAAGCC TCCTCTAAGC AGCGCAGGCG GCAGCCTGGA TGTCTGTGCG 001280
001281 CATCAAGGAG ACTTGCCGGC GCCAGAGTTG TGTCCACAGG TGCACTTGTG CCTCCCAAAG AGCGCGCGTA GAGACCATTT 001360
001361 CCCCTGCAAC GCCCCCCAGC CGAACACCCG CCGGGTGTGG CACCTCGGCC GAAACTCCTG GGGCGGCGCG GTGGAGCGTG 001440
001441 TGGAGGTTTC CGGGAAGACG CCTACGGCTG CGGCTCCGAC TGTGCGGGCT CCCGCCGCCC AGGCAAGAGC GTCCAGGAGC 001520
001521 GCGCTGGAAG CTGCGGCGCG CACCTTCCCC GGCGCAGTCT CTTGCCAGCC GGCGATCACG CAGAGCTGAA CCCCGCAGCT 001600
001601 AGGCGCGCAG GAAGGGCTGC ACAGAGTTTG AAGACACGGC AGCTGTAAGC TGGCGTGAGG AGGCCAAAGG AGCGCGCAGA 001680
001681 GCTGCAAGCA AAGGGCGGTG GGGCCTGGAC CCTGAAGTGA GTGGCCGACC GCAGCAGCTC AAGGTGCCAT CTGCCTGGCA 001760
001761 AGCTACCCGG GTCCCTCCGC CCCACTCTAA CTTTCCGCGA AAATCAGTTC CGCCTCTGCC CCAAGAGCCA AGAGGGGTGG 001840
001841 AAAGGAAGAG AGCTTGGGCT GGGAACGCGC CTGATGTCTA ACAGAAAGGC AGTGGCAGCT GGCGAAAAAT CCCCCTCCTG 001920
001921 CTGCACTCCT CCGCCACCGG GCTAGGTTGA AAGGAAAAAG CCAAGAAGCG CGAAGCAGCC CGGCTCTGGA AGGCTTTGGA 002000
002001 GAGTCCAGCT GACTTGTACA CAATTCGCGG CCTCTGGAGC CTTACCTGCC TTCTTGACTG AATGCCACCA GTTCGTTTTA 002080
002081 CGCTTGTGGC TTTTTGTTGA AGTCCCTATC ATAAGCAAAT GCAGTTTCTG GCTATGGTTA CTGCAATTCG AAATAAAAGG 002160
002161 CCTGTGAGGT GTGTCCCTCC AGACTGAGAG GCTATGACTC AGGGTTGGAC TTTATGGAAA AAAAGAAGTT TATAAAACAA 002240
002241 GTAACCCAGT TTCTCCAACC TTTACTGTGG AGCAACAGCG TCAAGCAACA AAACCCAGCA AAGTTTTGCT TGTCACTTAC 002320
002321 AAGGGTGTTA CTGAAATCTG GAAGGCGAAC AATTAGAAGA TAGCCCAAAC ATGCTCTATT GCTCTACACT GAAATACTTG 002400
002401 CCTCCAATAA TAGAAAAAAC CTGTTTTCGT GCAATTGATT GATTAGCGTT CTGCAGCAGT CCCTGGACAA TTTTAAAGAC 002480
002481 ATTTTGTGTT TGTGGCCAAA ATTAGAAACA AGCAGACACA CACACAAAAC AACCATATTC AAGACACGGT TCGACTGTTT 002560
002561 CCTTGACACT ACCCACGAAG TTTAAAGCAT TTTTTATGTT ATTTTCAAAC TTTCTTAAGT GATCCCATGA AATAAAAGTC 002640
002641 GATAATAGAA ATT
Labs working on this lncRNA
- Department of Pathology, Nanfang Hospital, Southern Medical University, Guangzhou 510515, China.
- Department of Pathology, School of Basic Medical Sciences, Southern Medical University, Guangzhou 510515, China
- Department of Pharmacy, Nanfang Hospital, Southern Medical University, Guangzhou 510515, China.[1]
