Difference between revisions of "ENST00000534336.1"
(Created page with "{{basic| tID = lnc-GREB1-7:1| classification = intergenic| location = chr2+:11534106-11543203| same = | sequence = <dnaseq>AGAGCCCCAGAGGCAGAGCTGCCCAAGGCTTTGGGAGCCCACCTCTTGCATC...") |
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sequence = <dnaseq>AGAGCCCCAGAGGCAGAGCTGCCCAAGGCTTTGGGAGCCCACCTCTTGCATCACTGTGCCCTGGATGTGAGACGTGGAATCAAGGAGATTATTTTGGAGCTTTAAGACGTAATGGCACCCTGCTGGGTTTCAGACTTGAGTGGAGCCTGCAGCCTTTCTTTCGGCCGGTTTCTCCCTTTTGGAACGGGAGTATTTACCCAATGCCTGTACCCCCATGACGTGCCCGTGTCCCCTTCCTCCACCACAAGATTGTAAGTTTTCTGGAGCCTCCCCAGAAGCTGAGAAGAAGCTGCTATGCTTCCTGTTCAGCCTGCAGAACCGCCACTTCCAGCATCGATGGTGTCAGGTCAGGTCCTCTGGGTAGAAGAAATGGAGTCAGTTAGGAGTGCTGGAGACTGAGTAAGAGGTGGCAGCTGAGGCTTACTACCCCAGGAAAGGGATGCCACCAGAGAAGGCAGACAACCAAGATGGCGACTCTCAATTTTTGAGC</dnaseq>| | sequence = <dnaseq>AGAGCCCCAGAGGCAGAGCTGCCCAAGGCTTTGGGAGCCCACCTCTTGCATCACTGTGCCCTGGATGTGAGACGTGGAATCAAGGAGATTATTTTGGAGCTTTAAGACGTAATGGCACCCTGCTGGGTTTCAGACTTGAGTGGAGCCTGCAGCCTTTCTTTCGGCCGGTTTCTCCCTTTTGGAACGGGAGTATTTACCCAATGCCTGTACCCCCATGACGTGCCCGTGTCCCCTTCCTCCACCACAAGATTGTAAGTTTTCTGGAGCCTCCCCAGAAGCTGAGAAGAAGCTGCTATGCTTCCTGTTCAGCCTGCAGAACCGCCACTTCCAGCATCGATGGTGTCAGGTCAGGTCCTCTGGGTAGAAGAAATGGAGTCAGTTAGGAGTGCTGGAGACTGAGTAAGAGGTGGCAGCTGAGGCTTACTACCCCAGGAAAGGGATGCCACCAGAGAAGGCAGACAACCAAGATGGCGACTCTCAATTTTTGAGC</dnaseq>| | ||
| + | }} | ||
| + | |||
| + | {{lnc| | ||
| + | tID = lnc-GREB1-7:1| | ||
| + | ltID = lnc-GREB1-7:1| | ||
| + | gID = lnc-GREB1-7| | ||
| + | size = 490 bp| | ||
| + | exons = 0| | ||
| + | sources = long non-coding rna db - lncrnadb.com| | ||
| + | tNames = ENST00000437795.1| | ||
| + | gNames = linc00570; Noncoding RNA activating5: ncRNA-a5| | ||
| + | sStructure = <html><img src="http://www.lncipedia.org/rnafold/lnc-GREB1-7:1.gif" border="0" width="400" height="400" /></html>| | ||
| + | score = -0.946025 (noncoding) | | ||
| + | tFrames = 0| | ||
| + | fFrames = 0| | ||
| + | LCM = yes| | ||
| + | LCZ = no| | ||
| + | hits = 0| | ||
| + | energy = -161.42| | ||
| + | PValue = 0.932| | ||
| + | prediction = <tab class=wikitable sep=tab head=top> | ||
| + | No microRNA targets found with MirTarget2 | ||
| + | </tab>| | ||
}} | }} | ||
Revision as of 18:09, 19 November 2013
Basic Information
| Transcript ID |
lnc-GREB1-7:1 |
| Source |
{{{source}}} |
| Same with |
' |
| Classification |
intergenic |
| Length |
{{{length}}} |
| Genomic location |
chr2+:11534106-11543203 |
| Exon number |
{{{number}}} |
| Exons |
{{{exons}}} |
| Genome context |
{{{context}}} |
| Sequence |
000001 AGAGCCCCAG AGGCAGAGCT GCCCAAGGCT TTGGGAGCCC ACCTCTTGCA TCACTGTGCC CTGGATGTGA GACGTGGAAT 000080
000081 CAAGGAGATT ATTTTGGAGC TTTAAGACGT AATGGCACCC TGCTGGGTTT CAGACTTGAG TGGAGCCTGC AGCCTTTCTT 000160 000161 TCGGCCGGTT TCTCCCTTTT GGAACGGGAG TATTTACCCA ATGCCTGTAC CCCCATGACG TGCCCGTGTC CCCTTCCTCC 000240 000241 ACCACAAGAT TGTAAGTTTT CTGGAGCCTC CCCAGAAGCT GAGAAGAAGC TGCTATGCTT CCTGTTCAGC CTGCAGAACC 000320 000321 GCCACTTCCA GCATCGATGG TGTCAGGTCA GGTCCTCTGG GTAGAAGAAA TGGAGTCAGT TAGGAGTGCT GGAGACTGAG 000400 000401 TAAGAGGTGG CAGCTGAGGC TTACTACCCC AGGAAAGGGA TGCCACCAGA GAAGGCAGAC AACCAAGATG GCGACTCTCA 000480 000481 ATTTTTGAGC |
