Difference between revisions of "ENST00000517550.1"

Revision as of 11:10, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	ENST00000517550.1
Source	Gencode19
Same with	lnc-EVX1-10:6
Classification	antisense
Length	2022 nt
Genomic location	chr7+:27161536..27168379
Exon number	4
Exons	27161536..27161645,27162086..27162285,27163079..27164229,27167819..27168379
Genome context
Sequence	000001 AGGAAAAGGA AACGCCAAGA CATAGAAAAC CACGCTTTTC CCGTAGGAAG AACCGATGAT GAGCCCTGAT GAAAGAAGGA 000080 000081 AGAAGACCCG CTGTCTGCGA AGGCCTAAAG GCCGCGGTTG CCAGGAACCG TGGAGGGCCA ACTCCTCCCA ACCGCCCTGG 000160 000161 TGCAAAGTCC CACGCGGCGA AGAGTTTTGG AGCAGCGCTT ACCTAGAAAG ATGTTTAAAT TCTGAACCAG GAATTGTCTC 000240 000241 CAACTCCAGG CGCTCAGGGA ATCGCCTTTT CCGGTGTCCA GGCGCTCTGC AGACAAATAA ACAGCAGAAG CAAATGGTCA 000320 000321 CCGAGCCGGC AGTCAGCTTT CTGGGAGTGG GAGATGATGG GGAAAGAGGA AAGAATCGTC CGCTCGCCGG ACCCTGGCTT 000400 000401 GGAGAAGTTC TGCGCTCCGC TGGGACTCTG CGGGCCCTTT GCGTCTACAG ACCTATCCCT GCCCCGACTA CCCCTTCACT 000480 000481 CAGACCCAGG TAACCTCTTA CCCCAGCCTG CCCCAAACCA GCCCTCCGCT GTCTGTCTGC CTTCACGCAA TTCTGTAGAT 000560 000561 AGCGCTAAGA GGGGATATCA AATAGCTGAG GAGTCCCCTG ACCCCTGGCT TCGGAGCCCC CTAGCACGTG GAACAAGTGG 000640 000641 CCGCACACCG GTAGCTGCGC TCTGCCACAG TTCGACCCGT AGCCCCCACA AACCAAAGGA AAAGGACCCA GGATCCACGC 000720 000721 TGCGCGCTGC GCCCCCTTTC TCTTGTTCAA ACTTGCTTTC TGTGTCCCCA AAGGGAGTGC CCCCTGGTCT TGGGGCTCCT 000800 000801 GGCATGACCA TGAGCAAGGT GGACTCAGCC ATCCTGCACT TTGCCTCTCA ATTTCATTCC AGAAAGATCC GCTATGCCGC 000880 000881 CACCCACCAC TCCCCTGCGT GACACTTAGG AGTATGTAAT TATTATGGTT ATTATTTTTG CTGTTTCCTT ATCTCCAAGT 000960 000961 CTAATATTCA TGGCTGCTGT ACCCCATAAA TCGTTCAGAC TAATGAGTCA CAGAGAGATG CTGCCCAGGT CTCTCACTTT 001040 001041 ACAATGGCTG CCGCCGCCGC CGTGGCCTCT CTCTCCGCGT TTTTGGCGCT CGCTTGCTCC CTCGCTCGCC CGGCGCGGGT 001120 001121 GATTTATGAA CGCCGGGAAA ATTGAACAAA GCCGCGCGCC CGTCCTGTGG TATCTCTGCA GCCTTCCCCA GCGTGAATCA 001200 001201 GAACATTACC AACTGTCTGC GCATCCGTCC CACTTCATCA CCAAAGCCAG GATGTGACCG CAGAAAACCC AAGCCCGAAC 001280 001281 TCACGTTTCC CCGGACGCGG CGCGCTCCCT GGACTCGCAG AAACCCTGCG GAAAAGGCCC CAAGATCTGG TGAGGGCCTG 001360 001361 CCAGCTCCGT CCTCCCTGCC GAGGGCTCTC TCCTGCCTTC CTGAAGGAGT TAAAAGCCTT TGGAGATAAA TCTGAGGGTG 001440 001441 TGTGTTTTTA AAAATCAAAT GGGAAGGACA CGTTTCTATG CCTTACAGAG ACTTGAAGCC TGAAAGCCTG GCCAAGTTTG 001520 001521 GGAAGAAGAG GAGCCCTCTC AGAGCTCAAG AGCCTTCCTA CTCTTTGGAA CTTTTCCACA GTAGGCCAAG CTTGACAAGA 001600 001601 GTTCAGCTCA AGTTGAACAT ACATACACAC ACTCTCACAC ACAAATTATG TGAGCCGTCA GAATCCAAGT GAATCCAGCT 001680 001681 CAAGCTATCT ACAAGGTTTT TACATGCAAG GTCAAGTATC TCAATCCAGA GGACTTTTGT TTTCTTAATG AAAAGCTTAG 001760 001761 AAAACACATG AATCTTAGAT TTTTAATGTT TTTTAAATGG AGTTTATTCT TAGCACATGG CTTTCTATGT AGCCACATCA 001840 001841 CAATTTGTAC AGTTCCACAT AAGTCTAAAT GCACTCCCCT CTCCCCAAAG ACCGTGCCCC AGAAGGGGAC AACAGTATCT 001920 001921 CTGTAACAGT GTCTTAAATA AATGCAAGTA AGAAAAACTA ACATGTCACA CCTACCATCA AGGTCTACAC ATCTTAAGAA 002000 002001 TTAA

@@ Line 42: / Line 42: @@
 sequence = <dnaseq>AGGAAAAGGAAACGCCAAGACATAGAAAACCACGCTTTTCCCGTAGGAAGAACCGATGATGAGCCCTGATGAAAGAAGGAAGAAGACCCGCTGTCTGCGAAGGCCTAAAGGCCGCGGTTGCCAGGAACCGTGGAGGGCCAACTCCTCCCAACCGCCCTGGTGCAAAGTCCCACGCGGCGAAGAGTTTTGGAGCAGCGCTTACCTAGAAAGATGTTTAAATTCTGAACCAGGAATTGTCTCCAACTCCAGGCGCTCAGGGAATCGCCTTTTCCGGTGTCCAGGCGCTCTGCAGACAAATAAACAGCAGAAGCAAATGGTCACCGAGCCGGCAGTCAGCTTTCTGGGAGTGGGAGATGATGGGGAAAGAGGAAAGAATCGTCCGCTCGCCGGACCCTGGCTTGGAGAAGTTCTGCGCTCCGCTGGGACTCTGCGGGCCCTTTGCGTCTACAGACCTATCCCTGCCCCGACTACCCCTTCACTCAGACCCAGGTAACCTCTTACCCCAGCCTGCCCCAAACCAGCCCTCCGCTGTCTGTCTGCCTTCACGCAATTCTGTAGATAGCGCTAAGAGGGGATATCAAATAGCTGAGGAGTCCCCTGACCCCTGGCTTCGGAGCCCCCTAGCACGTGGAACAAGTGGCCGCACACCGGTAGCTGCGCTCTGCCACAGTTCGACCCGTAGCCCCCACAAACCAAAGGAAAAGGACCCAGGATCCACGCTGCGCGCTGCGCCCCCTTTCTCTTGTTCAAACTTGCTTTCTGTGTCCCCAAAGGGAGTGCCCCCTGGTCTTGGGGCTCCTGGCATGACCATGAGCAAGGTGGACTCAGCCATCCTGCACTTTGCCTCTCAATTTCATTCCAGAAAGATCCGCTATGCCGCCACCCACCACTCCCCTGCGTGACACTTAGGAGTATGTAATTATTATGGTTATTATTTTTGCTGTTTCCTTATCTCCAAGTCTAATATTCATGGCTGCTGTACCCCATAAATCGTTCAGACTAATGAGTCACAGAGAGATGCTGCCCAGGTCTCTCACTTTACAATGGCTGCCGCCGCCGCCGTGGCCTCTCTCTCCGCGTTTTTGGCGCTCGCTTGCTCCCTCGCTCGCCCGGCGCGGGTGATTTATGAACGCCGGGAAAATTGAACAAAGCCGCGCGCCCGTCCTGTGGTATCTCTGCAGCCTTCCCCAGCGTGAATCAGAACATTACCAACTGTCTGCGCATCCGTCCCACTTCATCACCAAAGCCAGGATGTGACCGCAGAAAACCCAAGCCCGAACTCACGTTTCCCCGGACGCGGCGCGCTCCCTGGACTCGCAGAAACCCTGCGGAAAAGGCCCCAAGATCTGGTGAGGGCCTGCCAGCTCCGTCCTCCCTGCCGAGGGCTCTCTCCTGCCTTCCTGAAGGAGTTAAAAGCCTTTGGAGATAAATCTGAGGGTGTGTGTTTTTAAAAATCAAATGGGAAGGACACGTTTCTATGCCTTACAGAGACTTGAAGCCTGAAAGCCTGGCCAAGTTTGGGAAGAAGAGGAGCCCTCTCAGAGCTCAAGAGCCTTCCTACTCTTTGGAACTTTTCCACAGTAGGCCAAGCTTGACAAGAGTTCAGCTCAAGTTGAACATACATACACACACTCTCACACACAAATTATGTGAGCCGTCAGAATCCAAGTGAATCCAGCTCAAGCTATCTACAAGGTTTTTACATGCAAGGTCAAGTATCTCAATCCAGAGGACTTTTGTTTTCTTAATGAAAAGCTTAGAAAACACATGAATCTTAGATTTTTAATGTTTTTTAAATGGAGTTTATTCTTAGCACATGGCTTTCTATGTAGCCACATCACAATTTGTACAGTTCCACATAAGTCTAAATGCACTCCCCTCTCCCCAAAGACCGTGCCCCAGAAGGGGACAACAGTATCTCTGTAACAGTGTCTTAAATAAATGCAAGTAAGAAAAACTAACATGTCACACCTACCATCAAGGTCTACACATCTTAAGAATTAAATAATCTTGTGAGGTCCA</dnaseq>|
 }}
-[[Category:Antisense]]
+[[Category:Antisense]][[Category:ENSG00000253552.3]]