Difference between revisions of "ENST00000340444.1"

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(Created page with "Please input one-sentence summary here. ==Annotated Information== ===Transcriptomic Nomeclature=== Please input transcriptomic nomeclature information here. ===Functio...")
 
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sequence = <dnaseq>GGTGGAGCCAAATAAGGGAATGAAAGCAGGCCACCGGAGCCTCGGAGAGGCAACCGTTTGGGGTACTCTTCCACACTGTGGCAGCTTTGTTCTTTTGCTCTTTGCAGTAAGTTTTGCTGTTGCTTACTCTTTGGGTCTGCACTGCCTTTATGAACTGTAACACTGACCATGGAGGTCTGCAGCTTCACTCCTCAAGCCAGCAAGACCAGGAGCCCACTGGGAGGAGGAATGAACAACTCTGGACACGCCACCCTTAAGAGCTGTAACACTCACCGCGACGGTCTGCAGCTTCACTCCTGAAGTCAGCGAGACCACAAACCCACCAGAAGGAAGAAAATCCGGACACATCTGAACATCTGAGGGAACTCCGCACACACCATCTTTAAGAACTGTAACACTCACCACGAGGGCCCGTGGCTTCATTCTTGAAGTCAGCAAGACCAAGAACCCACCAATTCTGGACACAACAGGACACACACATGGGAGGGGGAGGCCAGAGGGAAACCTAGCTGGCTTGGGGTGGGAATTTGAATCCCTGAGCCCATCTTCTTCTTTCACCACTTTGTCCGGTGACATTAGGACCAACCAACCAATGCCATTATATTTCTTAGTTTACAAGAAAATGTTTGAAGTTCTCATGCACAGAATCACTTAGCTTCTTGCTTTTTACAAGTGGTTGATTAGGAGTATTCAATACAGATTTTGTGTATCACTATAAACAGTTCACAGCATGGACTACTGGTGTTCTCTTTACTAACTGAAATGGTGTCATTAGCACCTTTAAATCTAATCCATTTAGAGAGCCAGTTCCGGAAACCTCAGAACCAGTTTGGAAAACTTCCGTTCTTCTGAAGCCATTTTTGGAACCACATCTGTGCTAGGTTCTCCAGGGAAACAGAACCAATATGTTTTATTTACTATGGGGACTGGCTCATATGATTCTGGAGGCCTAGAAGTCCCTCCCTCTCAAGATGTGCTGTCAGCAAGCTGCAGAACCAGGAAAGCTGGTGGTGTCAGAGTCTGAAGGCCTGAGAACTGGGTGGGGAGTGGGACAGACTAAGGGGCCTTTAGTCTCTGGGTTGGTGTGGTCCCCACAGGTGAGCCTTTCGTGGAGAAGGGTGGAGAGGGGATCTGGAAGGGCCAATAGAAGATACTCAGCACTAAGAGACCTTTGGACTCAGACCAGAACTTACACCATTCATTCATTCAGTCGGTGAAAATGTATTGACCACTGTATCAACCAGGATTGTGACACAAAAACAGATGGCACACTCAAAAGAGGATAATTCAAGAAGGGCTTCTTTAAGGGACTATTTCCCAAGATGGGAATGGAGGGGAACCTGCAGGGCTAGTGTCCTACCCTCCAGCAGGCAGCAGCTAATTCCTGAGGGGATAAGGACGTGGTTGCGAGGACATGGAGGGAAAGTTCTACAGAGGAGGCACAGTGGGCTTCAGGAACACCCTGCTTGAGAGGCCTGTGAGAGGGATTGTTTTCTACTGTTTGACATTCACGTAACCTCCTAACGCTGTCTGGGGAAGATGCTACCCCCTGCTCTCCCCGTCTTTCCTGCACTCTCAGCAATGGGATGGGCTGACTGATGCCCTGTGGGCTGGAAAGCTGACCACAGTTGCTGCAGACCAGACCCCCTCACATAGTGAGTGCTGGGCTGAGGAATCCAGGAGAGCCCGAGGGGGGACACTGAAGGTGTATCGTTGGCCCTGCCAGCTGCAAGTGAACTGCTTCTGATGAATTTTAATAGGGAGAAAGAAGTATTTGCTAAGAATGGCAATCCTGATGCTCAGCCTTCAACTCATCTTGTTATTAATACCATCAATATCCCATGAGGCTCATAAAACGAGTCTTTCTTCTTGGAAACATGACCAAGATTGGGCAAACGTCTCCAACATGACTTTCAGCAACGGAAAACTAAGAGTCAAAGGCATTTATTACCGGAATGCCGACATTTGCTCTCGACATCGCGTAACCTCAGCAGGCCTAACTCTGCAGGACCTTCAGCTATGGTGTAATTTGAGGTCAGTGGCCAGAGGACAGATCCCGTCTACATTATGAGTGAAGCGGAGAGCTACTGCAGGGTTCTGAGCAGAGTCCTAATTTATATTTTAGAAGAATCATCATGGCTCCTAGATTAGGAATAAAACGAAGGGGCCCAGGGATGGAAACGATGAGTCCAGTTGGGTTACTGCAAAGATCCAGGCCAGAAATCCAGGCACAGTGGCACACACCTGAGTCCCAGATAATTCCACCTACTGGTCCTGCTCTGTGGCCTACTGGTCCGAGTCCAGCCCCGACTGATTTCTGGGCCTGTAATGTCTAAAAACGCTCCCTGCTGATGTTTTGCAAGTGACTGTGTTACTTGAAGGCAGTTCCTAGGATAAACTAGTCGCTTTATC</dnaseq>|
 
sequence = <dnaseq>GGTGGAGCCAAATAAGGGAATGAAAGCAGGCCACCGGAGCCTCGGAGAGGCAACCGTTTGGGGTACTCTTCCACACTGTGGCAGCTTTGTTCTTTTGCTCTTTGCAGTAAGTTTTGCTGTTGCTTACTCTTTGGGTCTGCACTGCCTTTATGAACTGTAACACTGACCATGGAGGTCTGCAGCTTCACTCCTCAAGCCAGCAAGACCAGGAGCCCACTGGGAGGAGGAATGAACAACTCTGGACACGCCACCCTTAAGAGCTGTAACACTCACCGCGACGGTCTGCAGCTTCACTCCTGAAGTCAGCGAGACCACAAACCCACCAGAAGGAAGAAAATCCGGACACATCTGAACATCTGAGGGAACTCCGCACACACCATCTTTAAGAACTGTAACACTCACCACGAGGGCCCGTGGCTTCATTCTTGAAGTCAGCAAGACCAAGAACCCACCAATTCTGGACACAACAGGACACACACATGGGAGGGGGAGGCCAGAGGGAAACCTAGCTGGCTTGGGGTGGGAATTTGAATCCCTGAGCCCATCTTCTTCTTTCACCACTTTGTCCGGTGACATTAGGACCAACCAACCAATGCCATTATATTTCTTAGTTTACAAGAAAATGTTTGAAGTTCTCATGCACAGAATCACTTAGCTTCTTGCTTTTTACAAGTGGTTGATTAGGAGTATTCAATACAGATTTTGTGTATCACTATAAACAGTTCACAGCATGGACTACTGGTGTTCTCTTTACTAACTGAAATGGTGTCATTAGCACCTTTAAATCTAATCCATTTAGAGAGCCAGTTCCGGAAACCTCAGAACCAGTTTGGAAAACTTCCGTTCTTCTGAAGCCATTTTTGGAACCACATCTGTGCTAGGTTCTCCAGGGAAACAGAACCAATATGTTTTATTTACTATGGGGACTGGCTCATATGATTCTGGAGGCCTAGAAGTCCCTCCCTCTCAAGATGTGCTGTCAGCAAGCTGCAGAACCAGGAAAGCTGGTGGTGTCAGAGTCTGAAGGCCTGAGAACTGGGTGGGGAGTGGGACAGACTAAGGGGCCTTTAGTCTCTGGGTTGGTGTGGTCCCCACAGGTGAGCCTTTCGTGGAGAAGGGTGGAGAGGGGATCTGGAAGGGCCAATAGAAGATACTCAGCACTAAGAGACCTTTGGACTCAGACCAGAACTTACACCATTCATTCATTCAGTCGGTGAAAATGTATTGACCACTGTATCAACCAGGATTGTGACACAAAAACAGATGGCACACTCAAAAGAGGATAATTCAAGAAGGGCTTCTTTAAGGGACTATTTCCCAAGATGGGAATGGAGGGGAACCTGCAGGGCTAGTGTCCTACCCTCCAGCAGGCAGCAGCTAATTCCTGAGGGGATAAGGACGTGGTTGCGAGGACATGGAGGGAAAGTTCTACAGAGGAGGCACAGTGGGCTTCAGGAACACCCTGCTTGAGAGGCCTGTGAGAGGGATTGTTTTCTACTGTTTGACATTCACGTAACCTCCTAACGCTGTCTGGGGAAGATGCTACCCCCTGCTCTCCCCGTCTTTCCTGCACTCTCAGCAATGGGATGGGCTGACTGATGCCCTGTGGGCTGGAAAGCTGACCACAGTTGCTGCAGACCAGACCCCCTCACATAGTGAGTGCTGGGCTGAGGAATCCAGGAGAGCCCGAGGGGGGACACTGAAGGTGTATCGTTGGCCCTGCCAGCTGCAAGTGAACTGCTTCTGATGAATTTTAATAGGGAGAAAGAAGTATTTGCTAAGAATGGCAATCCTGATGCTCAGCCTTCAACTCATCTTGTTATTAATACCATCAATATCCCATGAGGCTCATAAAACGAGTCTTTCTTCTTGGAAACATGACCAAGATTGGGCAAACGTCTCCAACATGACTTTCAGCAACGGAAAACTAAGAGTCAAAGGCATTTATTACCGGAATGCCGACATTTGCTCTCGACATCGCGTAACCTCAGCAGGCCTAACTCTGCAGGACCTTCAGCTATGGTGTAATTTGAGGTCAGTGGCCAGAGGACAGATCCCGTCTACATTATGAGTGAAGCGGAGAGCTACTGCAGGGTTCTGAGCAGAGTCCTAATTTATATTTTAGAAGAATCATCATGGCTCCTAGATTAGGAATAAAACGAAGGGGCCCAGGGATGGAAACGATGAGTCCAGTTGGGTTACTGCAAAGATCCAGGCCAGAAATCCAGGCACAGTGGCACACACCTGAGTCCCAGATAATTCCACCTACTGGTCCTGCTCTGTGGCCTACTGGTCCGAGTCCAGCCCCGACTGATTTCTGGGCCTGTAATGTCTAAAAACGCTCCCTGCTGATGTTTTGCAAGTGACTGTGTTACTTGAAGGCAGTTCCTAGGATAAACTAGTCGCTTTATC</dnaseq>|
 
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[[Category:Intergenic]]
+
[[Category:Intergenic]][[Category:lnc-CYS1-3]]

Revision as of 09:23, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000340444.1

Source

Gencode19

Same with

lnc-CYS1-3:2,NONHSAT069074

Classification

intergenic

Length

2412 nt

Genomic location

chr2-:10143286..10146158

Exon number

2

Exons

10143286..10144213,10144675..10146158

Genome context

Sequence
000001 GGTGGAGCCA AATAAGGGAA TGAAAGCAGG CCACCGGAGC CTCGGAGAGG CAACCGTTTG GGGTACTCTT CCACACTGTG 000080
000081 GCAGCTTTGT TCTTTTGCTC TTTGCAGTAA GTTTTGCTGT TGCTTACTCT TTGGGTCTGC ACTGCCTTTA TGAACTGTAA 000160
000161 CACTGACCAT GGAGGTCTGC AGCTTCACTC CTCAAGCCAG CAAGACCAGG AGCCCACTGG GAGGAGGAAT GAACAACTCT 000240
000241 GGACACGCCA CCCTTAAGAG CTGTAACACT CACCGCGACG GTCTGCAGCT TCACTCCTGA AGTCAGCGAG ACCACAAACC 000320
000321 CACCAGAAGG AAGAAAATCC GGACACATCT GAACATCTGA GGGAACTCCG CACACACCAT CTTTAAGAAC TGTAACACTC 000400
000401 ACCACGAGGG CCCGTGGCTT CATTCTTGAA GTCAGCAAGA CCAAGAACCC ACCAATTCTG GACACAACAG GACACACACA 000480
000481 TGGGAGGGGG AGGCCAGAGG GAAACCTAGC TGGCTTGGGG TGGGAATTTG AATCCCTGAG CCCATCTTCT TCTTTCACCA 000560
000561 CTTTGTCCGG TGACATTAGG ACCAACCAAC CAATGCCATT ATATTTCTTA GTTTACAAGA AAATGTTTGA AGTTCTCATG 000640
000641 CACAGAATCA CTTAGCTTCT TGCTTTTTAC AAGTGGTTGA TTAGGAGTAT TCAATACAGA TTTTGTGTAT CACTATAAAC 000720
000721 AGTTCACAGC ATGGACTACT GGTGTTCTCT TTACTAACTG AAATGGTGTC ATTAGCACCT TTAAATCTAA TCCATTTAGA 000800
000801 GAGCCAGTTC CGGAAACCTC AGAACCAGTT TGGAAAACTT CCGTTCTTCT GAAGCCATTT TTGGAACCAC ATCTGTGCTA 000880
000881 GGTTCTCCAG GGAAACAGAA CCAATATGTT TTATTTACTA TGGGGACTGG CTCATATGAT TCTGGAGGCC TAGAAGTCCC 000960
000961 TCCCTCTCAA GATGTGCTGT CAGCAAGCTG CAGAACCAGG AAAGCTGGTG GTGTCAGAGT CTGAAGGCCT GAGAACTGGG 001040
001041 TGGGGAGTGG GACAGACTAA GGGGCCTTTA GTCTCTGGGT TGGTGTGGTC CCCACAGGTG AGCCTTTCGT GGAGAAGGGT 001120
001121 GGAGAGGGGA TCTGGAAGGG CCAATAGAAG ATACTCAGCA CTAAGAGACC TTTGGACTCA GACCAGAACT TACACCATTC 001200
001201 ATTCATTCAG TCGGTGAAAA TGTATTGACC ACTGTATCAA CCAGGATTGT GACACAAAAA CAGATGGCAC ACTCAAAAGA 001280
001281 GGATAATTCA AGAAGGGCTT CTTTAAGGGA CTATTTCCCA AGATGGGAAT GGAGGGGAAC CTGCAGGGCT AGTGTCCTAC 001360
001361 CCTCCAGCAG GCAGCAGCTA ATTCCTGAGG GGATAAGGAC GTGGTTGCGA GGACATGGAG GGAAAGTTCT ACAGAGGAGG 001440
001441 CACAGTGGGC TTCAGGAACA CCCTGCTTGA GAGGCCTGTG AGAGGGATTG TTTTCTACTG TTTGACATTC ACGTAACCTC 001520
001521 CTAACGCTGT CTGGGGAAGA TGCTACCCCC TGCTCTCCCC GTCTTTCCTG CACTCTCAGC AATGGGATGG GCTGACTGAT 001600
001601 GCCCTGTGGG CTGGAAAGCT GACCACAGTT GCTGCAGACC AGACCCCCTC ACATAGTGAG TGCTGGGCTG AGGAATCCAG 001680
001681 GAGAGCCCGA GGGGGGACAC TGAAGGTGTA TCGTTGGCCC TGCCAGCTGC AAGTGAACTG CTTCTGATGA ATTTTAATAG 001760
001761 GGAGAAAGAA GTATTTGCTA AGAATGGCAA TCCTGATGCT CAGCCTTCAA CTCATCTTGT TATTAATACC ATCAATATCC 001840
001841 CATGAGGCTC ATAAAACGAG TCTTTCTTCT TGGAAACATG ACCAAGATTG GGCAAACGTC TCCAACATGA CTTTCAGCAA 001920
001921 CGGAAAACTA AGAGTCAAAG GCATTTATTA CCGGAATGCC GACATTTGCT CTCGACATCG CGTAACCTCA GCAGGCCTAA 002000
002001 CTCTGCAGGA CCTTCAGCTA TGGTGTAATT TGAGGTCAGT GGCCAGAGGA CAGATCCCGT CTACATTATG AGTGAAGCGG 002080
002081 AGAGCTACTG CAGGGTTCTG AGCAGAGTCC TAATTTATAT TTTAGAAGAA TCATCATGGC TCCTAGATTA GGAATAAAAC 002160
002161 GAAGGGGCCC AGGGATGGAA ACGATGAGTC CAGTTGGGTT ACTGCAAAGA TCCAGGCCAG AAATCCAGGC ACAGTGGCAC 002240
002241 ACACCTGAGT CCCAGATAAT TCCACCTACT GGTCCTGCTC TGTGGCCTAC TGGTCCGAGT CCAGCCCCGA CTGATTTCTG 002320
002321 GGCCTGTAAT GTCTAAAAAC GCTCCCTGCT GATGTTTTGC AAGTGACTGT GTTACTTGAA GGCAGTTCCT AGGATAAACT 002400
002401 AGTCGCTTTA TC
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