Difference between revisions of "ENST00000399492.2"

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(Created page with "Please input one-sentence summary here. ==Annotated Information== ===Transcriptomic Nomeclature=== Please input transcriptomic nomeclature information here. ===Functio...")
 
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sequence = <dnaseq>GACAAGAGGATGGGACTGCAGTTGTGGCTGCCAGGGCCCCGGCCAGGGTGAAAACAAGGAACATTCCAGAGAAGATCACAAGGATGCGAATAAAATCGGAGCTGCACAGGGATCTTTGGGCTGTAATAGGAGGGGACACACAGGGGTTGGAGTGCAGTGGCACGATCTCGGCTCAGTGCAACCTCCGCCTCCTGAGTTCAAGTGATTCTCCTGCCTCAGCCTCCCTAGTAGCTGGGATTACAGGACAAGGAGAGGGACAAATTCCTTCTTGGCATCCTTATGGCCCTGTGACCTGCTAATGAATGCTGACTCTGAGTTGCTACTAGAATTTGGTTTCCTTGTGGCTTCCCAGGAATTGGTCTCACTCTGCTCACTCTGTCTCCCAAGCTGGAGTGCAGTGGTACAGTCACGGCTCACTGCAGCCTCCACTTCCTGGACTCAAGTGATCTTCTCACTTCAGCCTTCTGAGTAGCTGGGACTACAGCCCCCTCTGCAGCTCTTCATGGGGGTCCACTCAAGTCAGAAGCCACATTTGGGTGTGATTCAGAGAGCTGTTTATGCAAAACCAGCTTTGTCACCATCAGGCAAGGCACCTGAATTCCCACCGCAGAGAGTGTTGTGGCCGTGAGGACTTTTCTGTCACCAGCCATTTCCAGGTAGACCCAGTGTAATCACAAGCATCCTTGTAAGTGGCAAAGAGGCAGAGGAGACAGCGCCAGAGAGGCAGCTGCATGAGAAGGATCAAGATGTTGCTGACTTTGAAGTTGGAAGAAGAAGGCCATGAGCCTCAGTATGTGGGCGGCTTCTAGAAGCTGGAAGGGGCAAGGAGATGGATTTGACCCTTCAGCCTCCAGGGGCAGCTGTACCTGCCATCACTGATTGTAGCCTGGTGAGGCCTGTTTTAGACTTCTGACCTGTAGAGCTGTAACATAATACATTTGGGTTGTTTTCAACCACTAAGTTTGTGGTAATTTGTTGTAGCAGCTGTAGAAAATGAATACATATGAATCCTCTGGCATTTGTTTGAGATTTGCTCTATGGCCTAGTATGTGGTTGTAAATGTTCCATCTGTGCCTGAAAAAATGTATATTTCT</dnaseq>|
 
sequence = <dnaseq>GACAAGAGGATGGGACTGCAGTTGTGGCTGCCAGGGCCCCGGCCAGGGTGAAAACAAGGAACATTCCAGAGAAGATCACAAGGATGCGAATAAAATCGGAGCTGCACAGGGATCTTTGGGCTGTAATAGGAGGGGACACACAGGGGTTGGAGTGCAGTGGCACGATCTCGGCTCAGTGCAACCTCCGCCTCCTGAGTTCAAGTGATTCTCCTGCCTCAGCCTCCCTAGTAGCTGGGATTACAGGACAAGGAGAGGGACAAATTCCTTCTTGGCATCCTTATGGCCCTGTGACCTGCTAATGAATGCTGACTCTGAGTTGCTACTAGAATTTGGTTTCCTTGTGGCTTCCCAGGAATTGGTCTCACTCTGCTCACTCTGTCTCCCAAGCTGGAGTGCAGTGGTACAGTCACGGCTCACTGCAGCCTCCACTTCCTGGACTCAAGTGATCTTCTCACTTCAGCCTTCTGAGTAGCTGGGACTACAGCCCCCTCTGCAGCTCTTCATGGGGGTCCACTCAAGTCAGAAGCCACATTTGGGTGTGATTCAGAGAGCTGTTTATGCAAAACCAGCTTTGTCACCATCAGGCAAGGCACCTGAATTCCCACCGCAGAGAGTGTTGTGGCCGTGAGGACTTTTCTGTCACCAGCCATTTCCAGGTAGACCCAGTGTAATCACAAGCATCCTTGTAAGTGGCAAAGAGGCAGAGGAGACAGCGCCAGAGAGGCAGCTGCATGAGAAGGATCAAGATGTTGCTGACTTTGAAGTTGGAAGAAGAAGGCCATGAGCCTCAGTATGTGGGCGGCTTCTAGAAGCTGGAAGGGGCAAGGAGATGGATTTGACCCTTCAGCCTCCAGGGGCAGCTGTACCTGCCATCACTGATTGTAGCCTGGTGAGGCCTGTTTTAGACTTCTGACCTGTAGAGCTGTAACATAATACATTTGGGTTGTTTTCAACCACTAAGTTTGTGGTAATTTGTTGTAGCAGCTGTAGAAAATGAATACATATGAATCCTCTGGCATTTGTTTGAGATTTGCTCTATGGCCTAGTATGTGGTTGTAAATGTTCCATCTGTGCCTGAAAAAATGTATATTTCT</dnaseq>|
 
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[[Category:Intergenic]]
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[[Category:Intergenic]][[Category:lnc-VAMP1-1]]

Revision as of 13:33, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000399492.2

Source

Gencode19

Same with

lnc-VAMP1-1:6,NONHSAT026077

Classification

intergenic

Length

1094 nt

Genomic location

chr12-:6548405..6560668

Exon number

7

Exons

6548405..6548842,6552712..6552883,6556127..6556253,6557203..6557316,6557806..6557903,6560036..6560146,6560635..6560668

Genome context

Sequence
000001 GACAAGAGGA TGGGACTGCA GTTGTGGCTG CCAGGGCCCC GGCCAGGGTG AAAACAAGGA ACATTCCAGA GAAGATCACA 000080
000081 AGGATGCGAA TAAAATCGGA GCTGCACAGG GATCTTTGGG CTGTAATAGG AGGGGACACA CAGGGGTTGG AGTGCAGTGG 000160
000161 CACGATCTCG GCTCAGTGCA ACCTCCGCCT CCTGAGTTCA AGTGATTCTC CTGCCTCAGC CTCCCTAGTA GCTGGGATTA 000240
000241 CAGGACAAGG AGAGGGACAA ATTCCTTCTT GGCATCCTTA TGGCCCTGTG ACCTGCTAAT GAATGCTGAC TCTGAGTTGC 000320
000321 TACTAGAATT TGGTTTCCTT GTGGCTTCCC AGGAATTGGT CTCACTCTGC TCACTCTGTC TCCCAAGCTG GAGTGCAGTG 000400
000401 GTACAGTCAC GGCTCACTGC AGCCTCCACT TCCTGGACTC AAGTGATCTT CTCACTTCAG CCTTCTGAGT AGCTGGGACT 000480
000481 ACAGCCCCCT CTGCAGCTCT TCATGGGGGT CCACTCAAGT CAGAAGCCAC ATTTGGGTGT GATTCAGAGA GCTGTTTATG 000560
000561 CAAAACCAGC TTTGTCACCA TCAGGCAAGG CACCTGAATT CCCACCGCAG AGAGTGTTGT GGCCGTGAGG ACTTTTCTGT 000640
000641 CACCAGCCAT TTCCAGGTAG ACCCAGTGTA ATCACAAGCA TCCTTGTAAG TGGCAAAGAG GCAGAGGAGA CAGCGCCAGA 000720
000721 GAGGCAGCTG CATGAGAAGG ATCAAGATGT TGCTGACTTT GAAGTTGGAA GAAGAAGGCC ATGAGCCTCA GTATGTGGGC 000800
000801 GGCTTCTAGA AGCTGGAAGG GGCAAGGAGA TGGATTTGAC CCTTCAGCCT CCAGGGGCAG CTGTACCTGC CATCACTGAT 000880
000881 TGTAGCCTGG TGAGGCCTGT TTTAGACTTC TGACCTGTAG AGCTGTAACA TAATACATTT GGGTTGTTTT CAACCACTAA 000960
000961 GTTTGTGGTA ATTTGTTGTA GCAGCTGTAG AAAATGAATA CATATGAATC CTCTGGCATT TGTTTGAGAT TTGCTCTATG 001040
001041 GCCTAGTATG TGGTTGTAAA TGTTCCATCT GTGCCTGAAA AAATGTATAT TTCT
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