Difference between revisions of "ENST00000587036.1"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
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sequence = <dnaseq>TGGGCAAGTTAGTTGCTCCAAAAACAAGATAAAATGATTGAGTTCTTTTCTCAAGCGGGAGTCGGAGTTTATCTGCTCTGAGGGTCATCCAACTAAAAAATATATATATCTTGAGGATTTGCATTGATATTCAATATCGACATATCCAAGGCCTCCCTCCAGACCACTAGATTCTAGTAATTTGAACCGGCTTCTCCTCTCCCTCAAAGCAGCTCTGCTTAGTACAGTGCTTGGCACAAAGCAAATATTCAATAAATGTTAGCCAACGTTAGCTGCTCATCTGCTTTCCTTAAAAGCCAAGTCATTTCAACAAACCACCCCTGAGGCCCCAAGACACAGAAGAACAGCATCCAGTCCAAGCCTTCTGGTGCAGAGCCCCAGCAGCTACTATTAATGAGTGTCTGGAATATGTTCCTGGCATTTCACCTACCCTCTCTCCAATCCTTCCAAGAAACTCACAAAGCAGGGCTTTTTCTTGAACTTCTCTTCCTCACAACAGTTAAATCATCCATTTAAAGATGTCAAACAACCTCCGTGTTCTAAGAACTATTTACTGAGCTCTACGGAGACACAGCTACAAGCACCACATGCTGGACCCCTGAATATGGAGGGCCAACTACACTAGAAACACACACGCTAGCTGAGAAAGATGGTG</dnaseq>| | sequence = <dnaseq>TGGGCAAGTTAGTTGCTCCAAAAACAAGATAAAATGATTGAGTTCTTTTCTCAAGCGGGAGTCGGAGTTTATCTGCTCTGAGGGTCATCCAACTAAAAAATATATATATCTTGAGGATTTGCATTGATATTCAATATCGACATATCCAAGGCCTCCCTCCAGACCACTAGATTCTAGTAATTTGAACCGGCTTCTCCTCTCCCTCAAAGCAGCTCTGCTTAGTACAGTGCTTGGCACAAAGCAAATATTCAATAAATGTTAGCCAACGTTAGCTGCTCATCTGCTTTCCTTAAAAGCCAAGTCATTTCAACAAACCACCCCTGAGGCCCCAAGACACAGAAGAACAGCATCCAGTCCAAGCCTTCTGGTGCAGAGCCCCAGCAGCTACTATTAATGAGTGTCTGGAATATGTTCCTGGCATTTCACCTACCCTCTCTCCAATCCTTCCAAGAAACTCACAAAGCAGGGCTTTTTCTTGAACTTCTCTTCCTCACAACAGTTAAATCATCCATTTAAAGATGTCAAACAACCTCCGTGTTCTAAGAACTATTTACTGAGCTCTACGGAGACACAGCTACAAGCACCACATGCTGGACCCCTGAATATGGAGGGCCAACTACACTAGAAACACACACGCTAGCTGAGAAAGATGGTG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:ENSG00000232295.3]] |
Revision as of 05:52, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
ENST00000587036.1 |
| Source |
Gencode19 |
| Same with |
NONHSAT113480 |
| Classification |
intergenic |
| Length |
655 nt |
| Genomic location |
chr6-:72012681..72037762 |
| Exon number |
6 |
| Exons |
72012681..72012748,72014051..72014093,72019999..72020076,72020253..72020345,72036033..72036323,72037681..72037762 |
| Genome context |
|
| Sequence |
000001 TGGGCAAGTT AGTTGCTCCA AAAACAAGAT AAAATGATTG AGTTCTTTTC TCAAGCGGGA GTCGGAGTTT ATCTGCTCTG 000080
000081 AGGGTCATCC AACTAAAAAA TATATATATC TTGAGGATTT GCATTGATAT TCAATATCGA CATATCCAAG GCCTCCCTCC 000160 000161 AGACCACTAG ATTCTAGTAA TTTGAACCGG CTTCTCCTCT CCCTCAAAGC AGCTCTGCTT AGTACAGTGC TTGGCACAAA 000240 000241 GCAAATATTC AATAAATGTT AGCCAACGTT AGCTGCTCAT CTGCTTTCCT TAAAAGCCAA GTCATTTCAA CAAACCACCC 000320 000321 CTGAGGCCCC AAGACACAGA AGAACAGCAT CCAGTCCAAG CCTTCTGGTG CAGAGCCCCA GCAGCTACTA TTAATGAGTG 000400 000401 TCTGGAATAT GTTCCTGGCA TTTCACCTAC CCTCTCTCCA ATCCTTCCAA GAAACTCACA AAGCAGGGCT TTTTCTTGAA 000480 000481 CTTCTCTTCC TCACAACAGT TAAATCATCC ATTTAAAGAT GTCAAACAAC CTCCGTGTTC TAAGAACTAT TTACTGAGCT 000560 000561 CTACGGAGAC ACAGCTACAA GCACCACATG CTGGACCCCT GAATATGGAG GGCCAACTAC ACTAGAAACA CACACGCTAG 000640 000641 CTGAGAAAGA TGGTG |
Predicted Small Protein
| Name | ENST00000587036.1_smProtein_518:556 |
| Length | 13 |
| Molecular weight | 1479.7461 |
| Aromaticity | 0.0833333333333 |
| Instability index | 77.8833333333 |
| Isoelectric point | 10.8344116211 |
| Runs | 4 |
| Runs residual | 0.0166666666667 |
| Runs probability | 0.0333200847908 |
| Amino acid sequence | MSNNLRVLRTIY |
| Secondary structure | LLLLHHHHHEEL |
| PRMN | - |
| PiMo | - |
