Difference between revisions of "Lnc-MTHFSD-2:4"

Revision as of 11:11, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-MTHFSD-2:4
Source	LNCipedia2.1
Same with	,
Classification	intergenic
Length	2579 nt
Genomic location	chr16-:86521343..86542441
Exon number	4
Exons	86521343..86523338,86523870..86524119,86524459..86524610,86542261..86542441
Genome context
Sequence	000001 CGGCAAGGGC GGCCCTCGCG CACCTGGCTG CCAGCCCGCA GGGGGCTCGC ACGCAGACCT GCCCTTGCCA CCTCAGCGCT 000080 000081 CGGGTGCGGG CTGGGGGCGG TGGAGCCACG AAAGGTGGTG CCGAGAGCGG AGCGCAGGAC AGCGCAGGAG CCCCGGCGCA 000160 000161 TCGCGGCGCG CACAGACCCA GGATTTGTGA AGAGGTGACC CAAATTTCAA GACAATGTTG GATGCAAACG GATTTGCCAG 000240 000241 CAACTGCATC ACTGTCAAAA CCAGCTCTGC CCGTGTCTTC CGAAGATACC AAGTGAAATA CATGTAGATG GGATTTACAT 000320 000321 CTGAAAAACC AAGTGAGAAA CTGAAGACCA GAGAGGGTGA GTGGTTTACT CAGTTTGGCA CAACTGACCC CAACCTAGCC 000400 000401 CTCCATGAGG ACTGAGCGCA TGAGAGATCC TGAGCCACAG CCGCCCAGCC CTGCTCCTCT CGAATTTCTG ACCTACAGGA 000480 000481 ACTGCAAGAA GTAATGAAAG ACTGCTGTTT AAAGCCACTG CATTTTGGCA TGATTTGTTA TGCAGTCGTA GATAACCAGA 000560 000561 AAACATCGGA TTTACATTTT AAGGATTTGG TGCATGGGAT GGGCTCAGTT GGGCAGTTCT TCTGTTCCAT GTGATGGTAC 000640 000641 TGGGGCTGCA GTCATTCAGA GGCTCAACTG GGCTGAACGT GCAAGGTTTC TTGCTCACGT GGCCATCAGT GGTGCTGGCT 000720 000721 GCTGTTGGGA GCTCCACTGG ACTTCTGTCC AGAGCTCCTC AGCTCACCTC TCTGTATCCT TGCCCTGTGG CTCAGGCTTC 000800 000801 TAACAATACA GAGGCTGGAT TCCAAGAGGA GGGAATTAGA AGCGTTCAGC CTTCTTAAGA CCAGGATTCA GATGTCCCAG 000880 000881 ACTGTCACTG TATTGACCGG AGCATTTACA GGCCAGCCTA GTAATTTTTC CATCTTGGGC AGGAATGGGT GGCATATGCT 000960 000961 GGGGGTAGGG GTAGCATTGT TGGGGATCAT CTTTGGAGCT GTGTGCCAAG GAGTAAATTG CTGGGCTGCT TTCTACCTGA 001040 001041 GGAAGTCCAC TATGCTTGCT TGTGGAGAGT GGATTGTGTG CTCAGAGTCC ACAAGGATTT AAGAATCCGA GCCCTGCTGC 001120 001121 CCTTGCCTCA GCCTGTGCAT TAGGGCCCGG TGGTGAGAGC ACTGAGCCAT TGTGAATCAA GGCCCCTCCC TCGACCTGCA 001200 001201 TACTAACAGG CCAGAAGAGC TTGCTTGATT TTGGTCCTAG GCTCCTGCCT GTGGGTTGGA TTCCAGGGGC ACTCTCTCCT 001280 001281 CCACAAACCA GACGGTGGCA GGTACATCCC CTCAATGGAA ATTGCCCACA CTTCACCCTA AAGACAGATC CTGCTGTTCA 001360 001361 GCAACAATGT GAGTGGCCCA CACATTTGTC CAGCATGAAA CCGTTTGCAG ATTCCTTTCC AGTACACAGT CCCGTCAGCC 001440 001441 GGTCACTTCA CGATGACAGC TCCTCGAAGC ACCTTTTGGT TTGCAGTTGT GTAGCTTAGA AGTAGGAGCC TGCACGGCTT 001520 001521 CAGGAATTCA CAGAAGGAGC ACACTTTGTG CTTGGAGAAG TTAATTATAG GAATATCCTG CAACCTGCTG CTCTGAGCCT 001600 001601 GTGCACCTGG GGTGTTTCCC TGGAGGTCCT GTGTATGAGG ATACTCATCA GCATGGGGTT TGGGAAGCCT AGCAGTGGAG 001680 001681 ACAACCTAGG TGGTCCTCTC CAGGGGAGTA GGTAAGAGCC CTACAGCAGT GAAAAGCATT GAAGGAAAAG TGTGTTCAGC 001760 001761 AGTGCTCTTA ATCTGATCAG AGCAGCCTGA ACACATTCTA AACACAGGGC ATTTAGAACT AGGGTAGAGG CACTAGAGCA 001840 001841 CCATAGATAC AAACTCAGAT TCTGAAGGTA AATGCCCAGG TTCAAATCCA AGCCCCCTCG CCAAGTGACC ATGACTCCCC 001920 001921 CGAGTCACCT GACCTCTGTG TTTACATCCT CAAAGTTAAG TAGTCAGGAA AGGGGGCT<

@@ Line 42: / Line 42: @@
 sequence = <dnaseq>CGGCAAGGGCGGCCCTCGCGCACCTGGCTGCCAGCCCGCAGGGGGCTCGCACGCAGACCTGCCCTTGCCACCTCAGCGCTCGGGTGCGGGCTGGGGGCGGTGGAGCCACGAAAGGTGGTGCCGAGAGCGGAGCGCAGGACAGCGCAGGAGCCCCGGCGCATCGCGGCGCGCACAGACCCAGGATTTGTGAAGAGGTGACCCAAATTTCAAGACAATGTTGGATGCAAACGGATTTGCCAGCAACTGCATCACTGTCAAAACCAGCTCTGCCCGTGTCTTCCGAAGATACCAAGTGAAATACATGTAGATGGGATTTACATCTGAAAAACCAAGTGAGAAACTGAAGACCAGAGAGGGTGAGTGGTTTACTCAGTTTGGCACAACTGACCCCAACCTAGCCCTCCATGAGGACTGAGCGCATGAGAGATCCTGAGCCACAGCCGCCCAGCCCTGCTCCTCTCGAATTTCTGACCTACAGGAACTGCAAGAAGTAATGAAAGACTGCTGTTTAAAGCCACTGCATTTTGGCATGATTTGTTATGCAGTCGTAGATAACCAGAAAACATCGGATTTACATTTTAAGGATTTGGTGCATGGGATGGGCTCAGTTGGGCAGTTCTTCTGTTCCATGTGATGGTACTGGGGCTGCAGTCATTCAGAGGCTCAACTGGGCTGAACGTGCAAGGTTTCTTGCTCACGTGGCCATCAGTGGTGCTGGCTGCTGTTGGGAGCTCCACTGGACTTCTGTCCAGAGCTCCTCAGCTCACCTCTCTGTATCCTTGCCCTGTGGCTCAGGCTTCTAACAATACAGAGGCTGGATTCCAAGAGGAGGGAATTAGAAGCGTTCAGCCTTCTTAAGACCAGGATTCAGATGTCCCAGACTGTCACTGTATTGACCGGAGCATTTACAGGCCAGCCTAGTAATTTTTCCATCTTGGGCAGGAATGGGTGGCATATGCTGGGGGTAGGGGTAGCATTGTTGGGGATCATCTTTGGAGCTGTGTGCCAAGGAGTAAATTGCTGGGCTGCTTTCTACCTGAGGAAGTCCACTATGCTTGCTTGTGGAGAGTGGATTGTGTGCTCAGAGTCCACAAGGATTTAAGAATCCGAGCCCTGCTGCCCTTGCCTCAGCCTGTGCATTAGGGCCCGGTGGTGAGAGCACTGAGCCATTGTGAATCAAGGCCCCTCCCTCGACCTGCATACTAACAGGCCAGAAGAGCTTGCTTGATTTTGGTCCTAGGCTCCTGCCTGTGGGTTGGATTCCAGGGGCACTCTCTCCTCCACAAACCAGACGGTGGCAGGTACATCCCCTCAATGGAAATTGCCCACACTTCACCCTAAAGACAGATCCTGCTGTTCAGCAACAATGTGAGTGGCCCACACATTTGTCCAGCATGAAACCGTTTGCAGATTCCTTTCCAGTACACAGTCCCGTCAGCCGGTCACTTCACGATGACAGCTCCTCGAAGCACCTTTTGGTTTGCAGTTGTGTAGCTTAGAAGTAGGAGCCTGCACGGCTTCAGGAATTCACAGAAGGAGCACACTTTGTGCTTGGAGAAGTTAATTATAGGAATATCCTGCAACCTGCTGCTCTGAGCCTGTGCACCTGGGGTGTTTCCCTGGAGGTCCTGTGTATGAGGATACTCATCAGCATGGGGTTTGGGAAGCCTAGCAGTGGAGACAACCTAGGTGGTCCTCTCCAGGGGAGTAGGTAAGAGCCCTACAGCAGTGAAAAGCATTGAAGGAAAAGTGTGTTCAGCAGTGCTCTTAATCTGATCAGAGCAGCCTGAACACATTCTAAACACAGGGCATTTAGAACTAGGGTAGAGGCACTAGAGCACCATAGATACAAACTCAGATTCTGAAGGTAAATGCCCAGGTTCAAATCCAAGCCCCCTCGCCAAGTGACCATGACTCCCCCGAGTCACCTGACCTCTGTGTTTACATCCTCAAAGTTAAGTAGTCAGGAAAGGGGGCTTGGGGCTTGCCACATGGATGGTTGCCACTCTCCTTTGCAAAGTGTAGTCCCCAAAAACAGGTGGAAGAGGGAAGGGTCCAATTAGAAGGCCGAGTACCAGCTGCCATGAATATGCCAGAGCTGCTGGCTAGTGATAAATAACTGAAACCCAGGGGGACAGCAGAGCTTGGGTGACCATACATTCTAGGAAAGAAAACATGCCTGTTGTCCTGGCTTTTTATCCAGCTTAGACAAAGATGGGCAAAGAAAATAATTTAGAAAATGGTAGAGATGGGCACAGAGAAAGGGCACGGAGGGAGGCACAAACAGAAGGCCAAGTGATGGTGGAGGCAGACATTGGAGAAATGCCTTTACAAGCCGGGGAATGCCAAGGATGCTGGCAACCCTGGGAGTGGGAAGAACCTGGAACACACCCTCCGTCAGAGTCTCCAGAAGGAACTGGCCCTTCATCACCTTTCGGACTTCTGGCCTCCAGAACTGGGCAAGAAAATGTTTCTGCTGTTGGAGGCCATCCAGCTGGTGGTCATTTGTTATGGTTGCCACAGAAAACGAATATAGATTTAGACATCTAATTTGCATATATAGATATGCATGTGTATTT</dnaseq>|
 }}
-[[Category:Intergenic]]
+[[Category:Intergenic]][[Category:lnc-MTHFSD-2]]