Difference between revisions of "Lnc-MYOCD-2:4"

From LncRNAWiki
Jump to: navigation, search
(Created page with "Please input one-sentence summary here. ==Annotated Information== ===Transcriptomic Nomeclature=== Please input transcriptomic nomeclature information here. ===Functio...")
 
Line 42: Line 42:
 
sequence = <dnaseq>AGTTGAAATAACTCCTTCGTGGAGGCTGGCTACATTTTCACAACGTCTGGTCCCAAGCTAGATCTTCGGGAAAAGGGATCAAGGAAATGACTATTCCTCCAAATAAAATGCAACAAGAAGAATGAAAAAACGTAGAAGAGAAAGCCTCGTGAAACTGAGAAGCATCTGCAACCACAAACTACAAAATGTAGCTGCTAAACAAAATGAAAGTTGGATCAAAGTGGTGGCAAATATCAAGAGTGAATATACTCCACGGCAGAGTACTGCAAATGCTGCACATCTTTCATGGATTCTGGTCCACCTCGTCCTCACGCGGGGATGCAGACTGACAAGCTTCCACCATGAAGGGTTGTCATTTGCCATAGCAGGGAGAGGAAAATGGAGCAAATCAGTCACCAGCTCGTCATACAGAAGAGTGTCCCACGTCATATCTGCTGATATGTTATGGCCAAAGTACATGACTATCTCCAAGGAGCTGAGAGGTGAAATTCGGACATTTGTCTGGACGGAGTAGAACCAAGAGAGTCGTAAACATCCTGTGGACTACACACCGTTTAACAAGATGCAACAGTATTCTGGCTTTGCCTTTCCTGGAGCCCTTAAACAGGCTGAAGTGAAAAGCACCATGACCTGTCACTACAAGACGAGAAGCCTCAGGAGAAGGAAGGAGATCCCTTTTCATTGGTTTTGCCGAGTTTCCCGAGCTCCATCCTCCTACAGTTAAATCAACACTCTTTATCCTTAGACTGCTGATAATCTCACCAACCGCTTCCTGGTAAGATCTGTAATGCGTGAGGTCTTCCTTCTTAGTTGTTTGCAAACATCAGTGATTAGGGACAATTAGGGACTGGTGTGCCTGTCATTCTTCTCCTTTCAGCTGAGGAGGAAATCCTCATGCACCGTTATCGGGAGTGAGACTTCATCTGTCAGCTGCAGTCTCAGGAATCCACGGGTTCATTCAGTCGCAACTCTAATCTCACTAACTTTATCTGTGTTCCTCAAATGCCTTAGACTATTTGCTTCCCACTGATAGGGAAACCTGACATCTCATTTTCTCAGTGTCCAGACAAAGATTCGTACATAGCAAGAAACTAAGATAGGTGTTACAGAACATGGAGGGAACCAGGAAAACCAAATAGAGGACCCCCTTCATGGGGCTTCCAACACGACAATAGGCAAAAGAGAAGAAACATACATGTAAGAGACAAGCAAAACCCAGAACCATCACTTATGAAGGATGTCCTCATCACCCTCTTTTGCTGCCTGTCAAAACCGGTGAGGGCTCATATGACACCTTAATTATGAATTAATCTTCGTTCCTCCTACACCAGCACTTCCCCTCACCCCAGTCGAAGCCATCTCTTTATATTTCCATAGCTTAAAATGCTATTTTTGGTTCTAGATGCTTTGCCTCTAGATTTGGATACTGCATCCATATTGTTGTATATTTTTTCCTTTCTATCTTTTCCACAATGTTTTTTTTTTTTAACTTTTAAGTTTAGGGGTCCAAGTGCAGGTTTGTTACATAGGTAAACTTGTGTCATGGGGGCTTGTTGTACAGATTATTTCATCACCAAGATATTAAGCCTAGTACCCATTAGTTACGTCTTTCTTCTCCCACCCTCCACCTTCCAAAAGGCCCCAGTATGTGTTGTACCTCTCTATGTGTCCATGTGTTCTCATCATTTAGCTCCCACTTATAAGTGAGAACGTGCGGTATCTGGCTTTCTGTCCCTACGTTAGTTTGCTAAGGATGATGGGCTCCAGCTTCATCCATGTCCCTGCAAAGGACATGGTCTTGTCCTTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTACCAATTTTGCTTTATTCAGTCTACCATCGATGGGCATTTAGGTTGATTCAATGTCTTTGCTATTGTGAATAGTGCTGCAATGAACATACACGTGCAGGTGTCTTTATCATAGAATTATTTATATTCCTTTGGGTATATATCCAGTAATGGGATTGCTGGGTTGAATGGTAGTTCTGTCTGTAGGTATTTGAAGGATCACCACACTGTCTTCCGCAGTGGCTGAACTAATTTACACTCCCACCGGCAGGGTCAAAGCATTTCTTTTTCTCCACAACCTCGCCAGTGCCTGTTGTTTTTTGACTTTTTAATAATAGCCATTCTGACTGGCGTTAGATGGTATCTTGTGGTTTTGATTTGCATTTCTCTAATGACCAGTGATGTTGAGCTTTTTCTCATGTGATTTTCAGCCACATACATGTCTTCCTTTGAAAAGTGTTCATGTCCTTTGCCCACTTCTTTATGTGGTTGTTTGTTTTTTTCTTGTAAATTTATTTAAGTTCATTATAGATGCTGGATGTTAGACCTTTGTCAGATGCATAGTTTGCAAAAATTTTCTCCCATTCTGTAGGTTGTCTGTTTACTCTGTTGATAGTTTCTTTTGCTATTCCACAATGTTTTGTGCAAGATAAGTGCTTAGCAAATGCTTGTAAAGGAATGCCTGCACCAGGAAAGTCCAATAGCTATGAATAAAGAAAGAAAGGACAAGTTCCAGGGGAGGTGATTTTTTTTTCATTTTCATTTTTTTAGACAGCTTTTAAAGGAATGGAGTAGCATGTTCTTCTGGAGCAGGAGTTACAAATTGGACCTCTAAGGGCCACATTCAGCCTATCCACATGGTTGCAGCACTGACAGAGTGTTTTGAAATTTTAAACTCTGAATACTTGTAGATAACATATGCATGCCACAATAAACTGCATTTCCATC</dnaseq>|
 
sequence = <dnaseq>AGTTGAAATAACTCCTTCGTGGAGGCTGGCTACATTTTCACAACGTCTGGTCCCAAGCTAGATCTTCGGGAAAAGGGATCAAGGAAATGACTATTCCTCCAAATAAAATGCAACAAGAAGAATGAAAAAACGTAGAAGAGAAAGCCTCGTGAAACTGAGAAGCATCTGCAACCACAAACTACAAAATGTAGCTGCTAAACAAAATGAAAGTTGGATCAAAGTGGTGGCAAATATCAAGAGTGAATATACTCCACGGCAGAGTACTGCAAATGCTGCACATCTTTCATGGATTCTGGTCCACCTCGTCCTCACGCGGGGATGCAGACTGACAAGCTTCCACCATGAAGGGTTGTCATTTGCCATAGCAGGGAGAGGAAAATGGAGCAAATCAGTCACCAGCTCGTCATACAGAAGAGTGTCCCACGTCATATCTGCTGATATGTTATGGCCAAAGTACATGACTATCTCCAAGGAGCTGAGAGGTGAAATTCGGACATTTGTCTGGACGGAGTAGAACCAAGAGAGTCGTAAACATCCTGTGGACTACACACCGTTTAACAAGATGCAACAGTATTCTGGCTTTGCCTTTCCTGGAGCCCTTAAACAGGCTGAAGTGAAAAGCACCATGACCTGTCACTACAAGACGAGAAGCCTCAGGAGAAGGAAGGAGATCCCTTTTCATTGGTTTTGCCGAGTTTCCCGAGCTCCATCCTCCTACAGTTAAATCAACACTCTTTATCCTTAGACTGCTGATAATCTCACCAACCGCTTCCTGGTAAGATCTGTAATGCGTGAGGTCTTCCTTCTTAGTTGTTTGCAAACATCAGTGATTAGGGACAATTAGGGACTGGTGTGCCTGTCATTCTTCTCCTTTCAGCTGAGGAGGAAATCCTCATGCACCGTTATCGGGAGTGAGACTTCATCTGTCAGCTGCAGTCTCAGGAATCCACGGGTTCATTCAGTCGCAACTCTAATCTCACTAACTTTATCTGTGTTCCTCAAATGCCTTAGACTATTTGCTTCCCACTGATAGGGAAACCTGACATCTCATTTTCTCAGTGTCCAGACAAAGATTCGTACATAGCAAGAAACTAAGATAGGTGTTACAGAACATGGAGGGAACCAGGAAAACCAAATAGAGGACCCCCTTCATGGGGCTTCCAACACGACAATAGGCAAAAGAGAAGAAACATACATGTAAGAGACAAGCAAAACCCAGAACCATCACTTATGAAGGATGTCCTCATCACCCTCTTTTGCTGCCTGTCAAAACCGGTGAGGGCTCATATGACACCTTAATTATGAATTAATCTTCGTTCCTCCTACACCAGCACTTCCCCTCACCCCAGTCGAAGCCATCTCTTTATATTTCCATAGCTTAAAATGCTATTTTTGGTTCTAGATGCTTTGCCTCTAGATTTGGATACTGCATCCATATTGTTGTATATTTTTTCCTTTCTATCTTTTCCACAATGTTTTTTTTTTTTAACTTTTAAGTTTAGGGGTCCAAGTGCAGGTTTGTTACATAGGTAAACTTGTGTCATGGGGGCTTGTTGTACAGATTATTTCATCACCAAGATATTAAGCCTAGTACCCATTAGTTACGTCTTTCTTCTCCCACCCTCCACCTTCCAAAAGGCCCCAGTATGTGTTGTACCTCTCTATGTGTCCATGTGTTCTCATCATTTAGCTCCCACTTATAAGTGAGAACGTGCGGTATCTGGCTTTCTGTCCCTACGTTAGTTTGCTAAGGATGATGGGCTCCAGCTTCATCCATGTCCCTGCAAAGGACATGGTCTTGTCCTTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTACCAATTTTGCTTTATTCAGTCTACCATCGATGGGCATTTAGGTTGATTCAATGTCTTTGCTATTGTGAATAGTGCTGCAATGAACATACACGTGCAGGTGTCTTTATCATAGAATTATTTATATTCCTTTGGGTATATATCCAGTAATGGGATTGCTGGGTTGAATGGTAGTTCTGTCTGTAGGTATTTGAAGGATCACCACACTGTCTTCCGCAGTGGCTGAACTAATTTACACTCCCACCGGCAGGGTCAAAGCATTTCTTTTTCTCCACAACCTCGCCAGTGCCTGTTGTTTTTTGACTTTTTAATAATAGCCATTCTGACTGGCGTTAGATGGTATCTTGTGGTTTTGATTTGCATTTCTCTAATGACCAGTGATGTTGAGCTTTTTCTCATGTGATTTTCAGCCACATACATGTCTTCCTTTGAAAAGTGTTCATGTCCTTTGCCCACTTCTTTATGTGGTTGTTTGTTTTTTTCTTGTAAATTTATTTAAGTTCATTATAGATGCTGGATGTTAGACCTTTGTCAGATGCATAGTTTGCAAAAATTTTCTCCCATTCTGTAGGTTGTCTGTTTACTCTGTTGATAGTTTCTTTTGCTATTCCACAATGTTTTGTGCAAGATAAGTGCTTAGCAAATGCTTGTAAAGGAATGCCTGCACCAGGAAAGTCCAATAGCTATGAATAAAGAAAGAAAGGACAAGTTCCAGGGGAGGTGATTTTTTTTTCATTTTCATTTTTTTAGACAGCTTTTAAAGGAATGGAGTAGCATGTTCTTCTGGAGCAGGAGTTACAAATTGGACCTCTAAGGGCCACATTCAGCCTATCCACATGGTTGCAGCACTGACAGAGTGTTTTGAAATTTTAAACTCTGAATACTTGTAGATAACATATGCATGCCACAATAAACTGCATTTCCATC</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]]
+
[[Category:Intergenic]][[Category:lnc-MYOCD-2]]

Revision as of 12:53, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

lnc-MYOCD-2:4

Source

LNCipedia2.1

Same with

,

Classification

intergenic

Length

2766 nt

Genomic location

chr17+:12453286..12540504

Exon number

4

Exons

12453286..12453394,12487877..12488038,12493758..12494065,12538318..12540504

Genome context

Sequence
000001 AGTTGAAATA ACTCCTTCGT GGAGGCTGGC TACATTTTCA CAACGTCTGG TCCCAAGCTA GATCTTCGGG AAAAGGGATC 000080
000081 AAGGAAATGA CTATTCCTCC AAATAAAATG CAACAAGAAG AATGAAAAAA CGTAGAAGAG AAAGCCTCGT GAAACTGAGA 000160
000161 AGCATCTGCA ACCACAAACT ACAAAATGTA GCTGCTAAAC AAAATGAAAG TTGGATCAAA GTGGTGGCAA ATATCAAGAG 000240
000241 TGAATATACT CCACGGCAGA GTACTGCAAA TGCTGCACAT CTTTCATGGA TTCTGGTCCA CCTCGTCCTC ACGCGGGGAT 000320
000321 GCAGACTGAC AAGCTTCCAC CATGAAGGGT TGTCATTTGC CATAGCAGGG AGAGGAAAAT GGAGCAAATC AGTCACCAGC 000400
000401 TCGTCATACA GAAGAGTGTC CCACGTCATA TCTGCTGATA TGTTATGGCC AAAGTACATG ACTATCTCCA AGGAGCTGAG 000480
000481 AGGTGAAATT CGGACATTTG TCTGGACGGA GTAGAACCAA GAGAGTCGTA AACATCCTGT GGACTACACA CCGTTTAACA 000560
000561 AGATGCAACA GTATTCTGGC TTTGCCTTTC CTGGAGCCCT TAAACAGGCT GAAGTGAAAA GCACCATGAC CTGTCACTAC 000640
000641 AAGACGAGAA GCCTCAGGAG AAGGAAGGAG ATCCCTTTTC ATTGGTTTTG CCGAGTTTCC CGAGCTCCAT CCTCCTACAG 000720
000721 TTAAATCAAC ACTCTTTATC CTTAGACTGC TGATAATCTC ACCAACCGCT TCCTGGTAAG ATCTGTAATG CGTGAGGTCT 000800
000801 TCCTTCTTAG TTGTTTGCAA ACATCAGTGA TTAGGGACAA TTAGGGACTG GTGTGCCTGT CATTCTTCTC CTTTCAGCTG 000880
000881 AGGAGGAAAT CCTCATGCAC CGTTATCGGG AGTGAGACTT CATCTGTCAG CTGCAGTCTC AGGAATCCAC GGGTTCATTC 000960
000961 AGTCGCAACT CTAATCTCAC TAACTTTATC TGTGTTCCTC AAATGCCTTA GACTATTTGC TTCCCACTGA TAGGGAAACC 001040
001041 TGACATCTCA TTTTCTCAGT GTCCAGACAA AGATTCGTAC ATAGCAAGAA ACTAAGATAG GTGTTACAGA ACATGGAGGG 001120
001121 AACCAGGAAA ACCAAATAGA GGACCCCCTT CATGGGGCTT CCAACACGAC AATAGGCAAA AGAGAAGAAA CATACATGTA 001200
001201 AGAGACAAGC AAAACCCAGA ACCATCACTT ATGAAGGATG TCCTCATCAC CCTCTTTTGC TGCCTGTCAA AACCGGTGAG 001280
001281 GGCTCATATG ACACCTTAAT TATGAATTAA TCTTCGTTCC TCCTACACCA GCACTTCCCC TCACCCCAGT CGAAGCCATC 001360
001361 TCTTTATATT TCCATAGCTT AAAATGCTAT TTTTGGTTCT AGATGCTTTG CCTCTAGATT TGGATACTGC ATCCATATTG 001440
001441 TTGTATATTT TTTCCTTTCT ATCTTTTCCA CAATGTTTTT TTTTTTTAAC TTTTAAGTTT AGGGGTCCAA GTGCAGGTTT 001520
001521 GTTACATAGG TAAACTTGTG TCATGGGGGC TTGTTGTACA GATTATTTCA TCACCAAGAT ATTAAGCCTA GTACCCATTA 001600
001601 GTTACGTCTT TCTTCTCCCA CCCTCCACCT TCCAAAAGGC CCCAGTATGT GTTGTACCTC TCTATGTGTC CATGTGTTCT 001680
001681 CATCATTTAG CTCCCACTTA TAAGTGAGAA CGTGCGGTAT CTGGCTTTCT GTCCCTACGT TAGTTTGCTA AGGATGATGG 001760
001761 GCTCCAGCTT CATCCATGTC CCTGCAAAGG ACATGGTCTT GTCCTTTTTT ATGGCTGCAT AGTATTCCAT GGTGTATATG 001840
001841 TACCAATTTT GCTTTATTCA GTCTACCATC GATGGGCATT TAGGTTGATT CAATGTCTTT GCTATTGTGA ATAGTGCTGC 001920
001921 AATGAACATA CACGTGCAGG TGTCTTTATC ATAGAATTAT TTATATTCCT TTGGGTATAT ATCCAGTAAT GGGATTGCTG 002000
002001 GGTTGAATGG TAGTTCTGTC TGTAGGTATT TGAAGGATCA CCACACTGTC TTCCGCAGTG GCTGAACTAA TTTACACTCC 002080
002081 CACCGGCAGG GTCAAAGCAT TTCTTTTTCT CCACAACCTC GCCAGTGCCT GTTGTTTTTT GACTTTTTAA TAATAGCCAT 002160
002161 TCTGACTGGC GTTAGATGGT ATCTTGTGGT TTTGATTTGC ATTTCTCTAA TGACCAGTGA TGTTGAGCTT TTTCTCATGT 002240
002241 GATTTTCAGC CACATACATG TCTTCCTTTG AAAAGTGTTC ATGTCCTTTG CCCACTTCTT TATGTGGTTG TTTGTTTTTT 002320
002321 TCTTGTAAAT TTATTTAAGT TCATTATAGA TGCTGGATGT TAGACCTTTG TCAGATGCAT AGTTTGCAAA AATTTTCTCC 002400
002401 CATTCTGTAG GTTGTCTGTT TACTCTGTTG ATAGTTTCTT TTGCTATTCC ACAATGTTTT GTGCAAGATA AGTGCTTAGC 002480
002481 AAATGCTTGT AAAGGAATGC CTGCACCAGG AAAGTCCAAT AGCTATGAAT AAAGAAAGAA AGGACAAGTT CCAGGGGAGG 002560
002561 TGATTTTTTT TTCATTTTCA TTTTTTTAGA CAGCTTTTAA AGGAATGGAG TAGCATGTTC TTCTGGAGCA GGAGTTACAA 002640
002641 ATTGGACCTC TAAGGGCCAC ATTCAGCCTA TCCACATGGT TGCAGCACTG ACAGAGTGTT TTGAAATTTT AAACTCTGAA 002720
002721 TACTTGTAGA TAACATATGC ATGCCACAAT AAACTGCATT TCCATC
[back to top]