Difference between revisions of "Lnc-DDX1-2:1"

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(Created page with "Please input one-sentence summary here. ==Annotated Information== ===Transcriptomic Nomeclature=== Please input transcriptomic nomeclature information here. ===Functio...")
 
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sequence = <dnaseq>AGTGAGGGGAGCGTGCTAGAACAGGAGGGTGGTTTGGGAGGGCTCTGCACTTCCTCGTCCCCCACCTCGCGTTTGAGGAACGCGAGGAGGGGACCTCATGGAACATTCCGGCTTGCTAGTCCAAGCTCCGTCCGTTCTGACCCCCAAACAGTCATCTCTTTGCCACGCCTTGGACCTAGGAGTGAGTACCCCGTGACCCAATCAGCCATTAGGAGCATAGACCCTGGAAGCAAGCTCTGAGCCATACTGGGAACATCAGGAGAGCCTGAGAATAAAATTCACTGAAGGTGGCAGAACAGAAAGACAGAAGAAATCTGGGCCCATGCCGATGTCATTAAACTGCTTAATTAACCAGCCCTGGAACTGCCCCACTTCTGGACTTATTATTTTTAAGGACAGGATCCCGGTCCAGTCTCCTGACTGCGTAGAGATCCCTCTTCTTCCCGAAAGGCAGTGGATGTACTTGAAAGGAGACTTCACGGACATTCCCAAGGAGACCTGCATTTTAAGCCCAGCTCTGTCTGCACTTGCTGTAAATGAGATCTCGCTTTGCTGCCCAGGCTGGTCTTGAGCTCTTGGCTCAGAAGATCCTCCCTCCTCAATCTCCTGAAGTGCTGGGATTGCAGGCATCAGCCACCACGCCCGGCCAAGCTTCTGTTCCATGTGCCGTCCTGGATCCCGCCTCCCACAACCCAGACCTGCTGCTGTCTTCCTTTTCTCTCTCTCTGCTGCTTTCTTCCCATTCTCCCAGTCTCTGCCATAAGCTCCAGATTTATTGAAGAGTAAAACATCCTTCCCTGCCCTCCAGGTACCCACAGCTTGGCAAGGGAGACAAACAAGAGAATGGCCCAGGGCAACGCGTGATAAACTATAAAATGGGTGGGAAAATCCAGAGAAAGCAACTTGCTCTACCCTGGAGGTTCAGACTGGCTTCACAGAGAACAGGACATCTGGGCAGGAATTTGTTAGAATGAGGAGAGATGTTTCCAAGCAGAGAGAACAAACTGCCTGGGCCAGGACAGAACCGGGAGACATTTAGAGAATGCAGGCAGTTGCTCAGTGGTTTCTTTTGAAAGGGTGAGGCCATGGCTATTCAACCAGTGATGGGAGCAACACATGGAGATAGAGGAGAGAGACAAGAAAAGGAAATCAAAGAAGAAGAAGCCAGAAAGGCATTGATCATGCACCCTGCTGGGGCCAGCCTCGGGGTTGGTATTCCCACCTGAGTTCAGCAGGTGGAGAAACCAGGGTCTCCCCCAAGCTGGGAGCAGAGCTGTGCTCTCAGGGATCTTTCCAGCCATGCTCCTTGGCTTATAGCTGGTGGGTTTGGGTTTCTTCTGAAATTGCAGAAGCTCTCTGGAGGTTTCTAGGCAGGGCCCTTTGGCCTCCTCTGTTTACCTGGTCTCAGGCCCTGACCTGCACCGCCAACCCTAGGACTCCGGGCTCTCCCTTTCACCCCACCTGCTGGCCTCCCTTCATCCTGCCAGATTCACTGCCACTGGGTGCCCACCCTGTCTGGACAAAGCCAAGGCCCCTCCTGCTAGGCCCATCCTGTGGCCACCTGGGGCTGCGAGAGATAGTTGCCCTTTTCCGCTTGACACTGTGTGTTTGGTCCCCTGCCCCGGGCAGCCCCATGCTCCTCCCTGGCCCTGCCGGCTTCCAGAGCATTTATCAGGGCCTGTGTATGTTTTTCTTGTGTGGGATTTGAAATGATTTCTTTAAACAAGGCCTAAACTGGGATTGATTTCCTCTCTTTATTTAGAGTGGTTTGTTTTGTAATATGGTTCTTCTAACAGTCTAAATTGTGGGAACTTGGGAGAAAAAAAAGAGAATTTTCTGACTTCATATAAATATAAATTACTTTATCTCTC</dnaseq>|
 
sequence = <dnaseq>AGTGAGGGGAGCGTGCTAGAACAGGAGGGTGGTTTGGGAGGGCTCTGCACTTCCTCGTCCCCCACCTCGCGTTTGAGGAACGCGAGGAGGGGACCTCATGGAACATTCCGGCTTGCTAGTCCAAGCTCCGTCCGTTCTGACCCCCAAACAGTCATCTCTTTGCCACGCCTTGGACCTAGGAGTGAGTACCCCGTGACCCAATCAGCCATTAGGAGCATAGACCCTGGAAGCAAGCTCTGAGCCATACTGGGAACATCAGGAGAGCCTGAGAATAAAATTCACTGAAGGTGGCAGAACAGAAAGACAGAAGAAATCTGGGCCCATGCCGATGTCATTAAACTGCTTAATTAACCAGCCCTGGAACTGCCCCACTTCTGGACTTATTATTTTTAAGGACAGGATCCCGGTCCAGTCTCCTGACTGCGTAGAGATCCCTCTTCTTCCCGAAAGGCAGTGGATGTACTTGAAAGGAGACTTCACGGACATTCCCAAGGAGACCTGCATTTTAAGCCCAGCTCTGTCTGCACTTGCTGTAAATGAGATCTCGCTTTGCTGCCCAGGCTGGTCTTGAGCTCTTGGCTCAGAAGATCCTCCCTCCTCAATCTCCTGAAGTGCTGGGATTGCAGGCATCAGCCACCACGCCCGGCCAAGCTTCTGTTCCATGTGCCGTCCTGGATCCCGCCTCCCACAACCCAGACCTGCTGCTGTCTTCCTTTTCTCTCTCTCTGCTGCTTTCTTCCCATTCTCCCAGTCTCTGCCATAAGCTCCAGATTTATTGAAGAGTAAAACATCCTTCCCTGCCCTCCAGGTACCCACAGCTTGGCAAGGGAGACAAACAAGAGAATGGCCCAGGGCAACGCGTGATAAACTATAAAATGGGTGGGAAAATCCAGAGAAAGCAACTTGCTCTACCCTGGAGGTTCAGACTGGCTTCACAGAGAACAGGACATCTGGGCAGGAATTTGTTAGAATGAGGAGAGATGTTTCCAAGCAGAGAGAACAAACTGCCTGGGCCAGGACAGAACCGGGAGACATTTAGAGAATGCAGGCAGTTGCTCAGTGGTTTCTTTTGAAAGGGTGAGGCCATGGCTATTCAACCAGTGATGGGAGCAACACATGGAGATAGAGGAGAGAGACAAGAAAAGGAAATCAAAGAAGAAGAAGCCAGAAAGGCATTGATCATGCACCCTGCTGGGGCCAGCCTCGGGGTTGGTATTCCCACCTGAGTTCAGCAGGTGGAGAAACCAGGGTCTCCCCCAAGCTGGGAGCAGAGCTGTGCTCTCAGGGATCTTTCCAGCCATGCTCCTTGGCTTATAGCTGGTGGGTTTGGGTTTCTTCTGAAATTGCAGAAGCTCTCTGGAGGTTTCTAGGCAGGGCCCTTTGGCCTCCTCTGTTTACCTGGTCTCAGGCCCTGACCTGCACCGCCAACCCTAGGACTCCGGGCTCTCCCTTTCACCCCACCTGCTGGCCTCCCTTCATCCTGCCAGATTCACTGCCACTGGGTGCCCACCCTGTCTGGACAAAGCCAAGGCCCCTCCTGCTAGGCCCATCCTGTGGCCACCTGGGGCTGCGAGAGATAGTTGCCCTTTTCCGCTTGACACTGTGTGTTTGGTCCCCTGCCCCGGGCAGCCCCATGCTCCTCCCTGGCCCTGCCGGCTTCCAGAGCATTTATCAGGGCCTGTGTATGTTTTTCTTGTGTGGGATTTGAAATGATTTCTTTAAACAAGGCCTAAACTGGGATTGATTTCCTCTCTTTATTTAGAGTGGTTTGTTTTGTAATATGGTTCTTCTAACAGTCTAAATTGTGGGAACTTGGGAGAAAAAAAAGAGAATTTTCTGACTTCATATAAATATAAATTACTTTATCTCTC</dnaseq>|
 
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[[Category:Intergenic]]
+
[[Category:Intergenic]][[Category:lnc-DDX1-2]]

Revision as of 10:17, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-DDX1-2:1

Source

LNCipedia2.1

Same with

NONHSAT069288

Classification

intergenic

Length

1871 nt

Genomic location

chr2+:15830906..15859085

Exon number

6

Exons

15830906..15830991,15831068..15831222,15840514..15840659,15841353..15841499,15855537..15855653,15857866..15859085

Genome context

Sequence
000001 AGTGAGGGGA GCGTGCTAGA ACAGGAGGGT GGTTTGGGAG GGCTCTGCAC TTCCTCGTCC CCCACCTCGC GTTTGAGGAA 000080
000081 CGCGAGGAGG GGACCTCATG GAACATTCCG GCTTGCTAGT CCAAGCTCCG TCCGTTCTGA CCCCCAAACA GTCATCTCTT 000160
000161 TGCCACGCCT TGGACCTAGG AGTGAGTACC CCGTGACCCA ATCAGCCATT AGGAGCATAG ACCCTGGAAG CAAGCTCTGA 000240
000241 GCCATACTGG GAACATCAGG AGAGCCTGAG AATAAAATTC ACTGAAGGTG GCAGAACAGA AAGACAGAAG AAATCTGGGC 000320
000321 CCATGCCGAT GTCATTAAAC TGCTTAATTA ACCAGCCCTG GAACTGCCCC ACTTCTGGAC TTATTATTTT TAAGGACAGG 000400
000401 ATCCCGGTCC AGTCTCCTGA CTGCGTAGAG ATCCCTCTTC TTCCCGAAAG GCAGTGGATG TACTTGAAAG GAGACTTCAC 000480
000481 GGACATTCCC AAGGAGACCT GCATTTTAAG CCCAGCTCTG TCTGCACTTG CTGTAAATGA GATCTCGCTT TGCTGCCCAG 000560
000561 GCTGGTCTTG AGCTCTTGGC TCAGAAGATC CTCCCTCCTC AATCTCCTGA AGTGCTGGGA TTGCAGGCAT CAGCCACCAC 000640
000641 GCCCGGCCAA GCTTCTGTTC CATGTGCCGT CCTGGATCCC GCCTCCCACA ACCCAGACCT GCTGCTGTCT TCCTTTTCTC 000720
000721 TCTCTCTGCT GCTTTCTTCC CATTCTCCCA GTCTCTGCCA TAAGCTCCAG ATTTATTGAA GAGTAAAACA TCCTTCCCTG 000800
000801 CCCTCCAGGT ACCCACAGCT TGGCAAGGGA GACAAACAAG AGAATGGCCC AGGGCAACGC GTGATAAACT ATAAAATGGG 000880
000881 TGGGAAAATC CAGAGAAAGC AACTTGCTCT ACCCTGGAGG TTCAGACTGG CTTCACAGAG AACAGGACAT CTGGGCAGGA 000960
000961 ATTTGTTAGA ATGAGGAGAG ATGTTTCCAA GCAGAGAGAA CAAACTGCCT GGGCCAGGAC AGAACCGGGA GACATTTAGA 001040
001041 GAATGCAGGC AGTTGCTCAG TGGTTTCTTT TGAAAGGGTG AGGCCATGGC TATTCAACCA GTGATGGGAG CAACACATGG 001120
001121 AGATAGAGGA GAGAGACAAG AAAAGGAAAT CAAAGAAGAA GAAGCCAGAA AGGCATTGAT CATGCACCCT GCTGGGGCCA 001200
001201 GCCTCGGGGT TGGTATTCCC ACCTGAGTTC AGCAGGTGGA GAAACCAGGG TCTCCCCCAA GCTGGGAGCA GAGCTGTGCT 001280
001281 CTCAGGGATC TTTCCAGCCA TGCTCCTTGG CTTATAGCTG GTGGGTTTGG GTTTCTTCTG AAATTGCAGA AGCTCTCTGG 001360
001361 AGGTTTCTAG GCAGGGCCCT TTGGCCTCCT CTGTTTACCT GGTCTCAGGC CCTGACCTGC ACCGCCAACC CTAGGACTCC 001440
001441 GGGCTCTCCC TTTCACCCCA CCTGCTGGCC TCCCTTCATC CTGCCAGATT CACTGCCACT GGGTGCCCAC CCTGTCTGGA 001520
001521 CAAAGCCAAG GCCCCTCCTG CTAGGCCCAT CCTGTGGCCA CCTGGGGCTG CGAGAGATAG TTGCCCTTTT CCGCTTGACA 001600
001601 CTGTGTGTTT GGTCCCCTGC CCCGGGCAGC CCCATGCTCC TCCCTGGCCC TGCCGGCTTC CAGAGCATTT ATCAGGGCCT 001680
001681 GTGTATGTTT TTCTTGTGTG GGATTTGAAA TGATTTCTTT AAACAAGGCC TAAACTGGGA TTGATTTCCT CTCTTTATTT 001760
001761 AGAGTGGTTT GTTTTGTAAT ATGGTTCTTC TAACAGTCTA AATTGTGGGA ACTTGGGAGA AAAAAAAGAG AATTTTCTGA 001840
001841 CTTCATATAA ATATAAATTA CTTTATCTCT C
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