Difference between revisions of "NONHSAT007824"
(Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
|||
| Line 42: | Line 42: | ||
sequence = <dnaseq>ataatatagtataatttatttgtattttttctcagatattagtatttctattccagttctcttttggttattgtttatatggtgtatctttttcccttcttttgctttcagactgtttctgtctttgaatctacattttgtcccttacaaagaacatatagttctatgatttttaaaatccattctgccaatatctgtcttttaattggagtgtttcagtgttaatcttgaggatcctatgtatatgatgagttacttttttttgctgtttttaagattctttgtctatggcttttgacagtttgattttgaagtgtctaggtgtggatattttgaatttattccacttggagtttgttgagcttcgtggatgtgtaaattcatgtttttaatcaaatctgttaagtattgagcccttatgtcttcaagtactttttttccccctttctttttcttgcttctttctggtacttcagttatgcctattaacacttgatggtgtcccacacaagtctttgaggctctgttcattttccttcattctttttctttctgagattggataaccacaattggcctatcttcaagtttcccaattctctcttcttcctgctcacacctttcctggtgttcctcttgtgaatttttcatgttaatgccagaatttctatttgatttttaaaaataaattatatctctctccttttttttttttttttgagatggagtctcgctctgtcacccaggctggagtgcagtggtgtgatcttggctcactgcaacctccaactcccgggttcaagcattctcctgcctcaatctcccgagtagctgggattacaggtgcgtgctaccatacctggaaatttttgtatttttttagtagagacggggtctcaccatgttggtaaggctggtctcgaactcttgaccttgtga</dnaseq>| | sequence = <dnaseq>ataatatagtataatttatttgtattttttctcagatattagtatttctattccagttctcttttggttattgtttatatggtgtatctttttcccttcttttgctttcagactgtttctgtctttgaatctacattttgtcccttacaaagaacatatagttctatgatttttaaaatccattctgccaatatctgtcttttaattggagtgtttcagtgttaatcttgaggatcctatgtatatgatgagttacttttttttgctgtttttaagattctttgtctatggcttttgacagtttgattttgaagtgtctaggtgtggatattttgaatttattccacttggagtttgttgagcttcgtggatgtgtaaattcatgtttttaatcaaatctgttaagtattgagcccttatgtcttcaagtactttttttccccctttctttttcttgcttctttctggtacttcagttatgcctattaacacttgatggtgtcccacacaagtctttgaggctctgttcattttccttcattctttttctttctgagattggataaccacaattggcctatcttcaagtttcccaattctctcttcttcctgctcacacctttcctggtgttcctcttgtgaatttttcatgttaatgccagaatttctatttgatttttaaaaataaattatatctctctccttttttttttttttttgagatggagtctcgctctgtcacccaggctggagtgcagtggtgtgatcttggctcactgcaacctccaactcccgggttcaagcattctcctgcctcaatctcccgagtagctgggattacaggtgcgtgctaccatacctggaaatttttgtatttttttagtagagacggggtctcaccatgttggtaaggctggtctcgaactcttgaccttgtga</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG003573]] |
Revision as of 09:35, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
| Transcript ID |
NONHSAT007824 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intergenic |
| Length |
939 nt |
| Genomic location |
chr1+:178538612..178539550 |
| Exon number |
1 |
| Exons |
178538612..178539550 |
| Genome context |
|
| Sequence |
000001 ataatatagt ataatttatt tgtatttttt ctcagatatt agtatttcta ttccagttct cttttggtta ttgtttatat 000080
000081 ggtgtatctt tttcccttct tttgctttca gactgtttct gtctttgaat ctacattttg tcccttacaa agaacatata 000160 000161 gttctatgat ttttaaaatc cattctgcca atatctgtct tttaattgga gtgtttcagt gttaatcttg aggatcctat 000240 000241 gtatatgatg agttactttt ttttgctgtt tttaagattc tttgtctatg gcttttgaca gtttgatttt gaagtgtcta 000320 000321 ggtgtggata ttttgaattt attccacttg gagtttgttg agcttcgtgg atgtgtaaat tcatgttttt aatcaaatct 000400 000401 gttaagtatt gagcccttat gtcttcaagt actttttttc cccctttctt tttcttgctt ctttctggta cttcagttat 000480 000481 gcctattaac acttgatggt gtcccacaca agtctttgag gctctgttca ttttccttca ttctttttct ttctgagatt 000560 000561 ggataaccac aattggccta tcttcaagtt tcccaattct ctcttcttcc tgctcacacc tttcctggtg ttcctcttgt 000640 000641 gaatttttca tgttaatgcc agaatttcta tttgattttt aaaaataaat tatatctctc tccttttttt tttttttttg 000720 000721 agatggagtc tcgctctgtc acccaggctg gagtgcagtg gtgtgatctt ggctcactgc aacctccaac tcccgggttc 000800 000801 aagcattctc ctgcctcaat ctcccgagta gctgggatta caggtgcgtg ctaccatacc tggaaatttt tgtatttttt 000880 000881 tagtagagac ggggtctcac catgttggta aggctggtct cgaactcttg accttgtga |
Predicted Small Protein
| Name | NONHSAT007824_smProtein_722:910 |
| Length | 63 |
| Molecular weight | 6850.7094 |
| Aromaticity | 0.145161290323 |
| Instability index | 60.1322580645 |
| Isoelectric point | 8.61138916016 |
| Runs | 7 |
| Runs residual | 0.0407373271889 |
| Runs probability | 0.0414111590582 |
| Amino acid sequence | MESRSVTQAGVQWCDLGSLQPPTPGFKHSPASISRVAGITGACYHTWKFLYFFSRDGVSP CW |
| Secondary structure | LLLLLLLLLLEEEELLLLLLLLLLLLLLLLLLHHHHLLLLLLLLLLEEEEEEEELLLLLL LL |
| PRMN | - |
| PiMo | - |
