Difference between revisions of "NONHSAT021232"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>TTCATCCAGCCTCAAGACCCTCTGTGTAGGGGGCTGGGAATAACGGGAACTGTGTTTAACATGACCCAATTTTCAGGCTGGTGACGAGTTCACGGGTGTCTCAGCAAAGTTGGACACAAGCTAGAGAGAGCTCTCTCCTCCCAGCCAAAACCTGGGAATTCCCCACTGCAGCTCCTCAGGGGCCCTGGACAGTAGCTGTGACCAGGCTGGTGAAAGGCCCGTCCCTCCCATCCAGGGCTTTCAAAGAAGTGGGTAGAATCACGGCCATCAAGTAAACGCCACTGCGGATGACAGAGGCCTAGCTGAGGAGGCTAGGGCCATGTCCTCCCAGCTGGCAGAGTCTGGACAGAGCCTCTGGTGGCCTCTGCCCTGTCATAGCCTAAGCTGCTGCAGCCACTGTGAGAGGCCACAGAGGGGAAGGGGACCCTGACGCCGGGCGCTGCCGCCTGGGGGAGCATGGCACGATTGCTCTTAGTGTTGAACTTTCTGTTTTGTCTCTTGCCCGTCCGGTTTTAGTTCCTGAAATTAAAGAAGTGGTGAGCCACAAGTACAAGACACCAATGGCCCACGAAATCTGCTACTCCGTATTATGTCTCTTCTCGTACGTGGCTGCAGTTCATAGCAGTGAGGAAGATCTCAGAACCCCGCCCCGGCCTGTCTCTAGCTGATGGAGAGGGGCTACGCAGCTGCCCCAGCCCAGGGCACGCCCCTGGCCCCTTGCTGTTCCCAAGTGCACGATGCTGCTGTGACTGAGGAGTGGATGATGCTCGTGTGTCCTCTGCAAGCCCCCTGCTGTGGCTTGGTTGGTTACCGGTTATGTGTCCCTCTGAGTGTGTCTTGAGCGTGTCCACCTTCTCCCTCTCCACTCCCAGAAGACCAAACTGCCTTCCCCTCAGGGCTCAAGAATGTGTACAGTCTGTGGGG</dnaseq>| | sequence = <dnaseq>TTCATCCAGCCTCAAGACCCTCTGTGTAGGGGGCTGGGAATAACGGGAACTGTGTTTAACATGACCCAATTTTCAGGCTGGTGACGAGTTCACGGGTGTCTCAGCAAAGTTGGACACAAGCTAGAGAGAGCTCTCTCCTCCCAGCCAAAACCTGGGAATTCCCCACTGCAGCTCCTCAGGGGCCCTGGACAGTAGCTGTGACCAGGCTGGTGAAAGGCCCGTCCCTCCCATCCAGGGCTTTCAAAGAAGTGGGTAGAATCACGGCCATCAAGTAAACGCCACTGCGGATGACAGAGGCCTAGCTGAGGAGGCTAGGGCCATGTCCTCCCAGCTGGCAGAGTCTGGACAGAGCCTCTGGTGGCCTCTGCCCTGTCATAGCCTAAGCTGCTGCAGCCACTGTGAGAGGCCACAGAGGGGAAGGGGACCCTGACGCCGGGCGCTGCCGCCTGGGGGAGCATGGCACGATTGCTCTTAGTGTTGAACTTTCTGTTTTGTCTCTTGCCCGTCCGGTTTTAGTTCCTGAAATTAAAGAAGTGGTGAGCCACAAGTACAAGACACCAATGGCCCACGAAATCTGCTACTCCGTATTATGTCTCTTCTCGTACGTGGCTGCAGTTCATAGCAGTGAGGAAGATCTCAGAACCCCGCCCCGGCCTGTCTCTAGCTGATGGAGAGGGGCTACGCAGCTGCCCCAGCCCAGGGCACGCCCCTGGCCCCTTGCTGTTCCCAAGTGCACGATGCTGCTGTGACTGAGGAGTGGATGATGCTCGTGTGTCCTCTGCAAGCCCCCTGCTGTGGCTTGGTTGGTTACCGGTTATGTGTCCCTCTGAGTGTGTCTTGAGCGTGTCCACCTTCTCCCTCTCCACTCCCAGAAGACCAAACTGCCTTCCCCTCAGGGCTCAAGAATGTGTACAGTCTGTGGGG</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG008234]] |
Revision as of 13:26, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT021232 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
924 nt |
| Genomic location |
chr11+:47349693..47350957 |
| Exon number |
2 |
| Exons |
47349693..47350255,47350597..47350957 |
| Genome context |
|
| Sequence |
000001 TTCATCCAGC CTCAAGACCC TCTGTGTAGG GGGCTGGGAA TAACGGGAAC TGTGTTTAAC ATGACCCAAT TTTCAGGCTG 000080
000081 GTGACGAGTT CACGGGTGTC TCAGCAAAGT TGGACACAAG CTAGAGAGAG CTCTCTCCTC CCAGCCAAAA CCTGGGAATT 000160 000161 CCCCACTGCA GCTCCTCAGG GGCCCTGGAC AGTAGCTGTG ACCAGGCTGG TGAAAGGCCC GTCCCTCCCA TCCAGGGCTT 000240 000241 TCAAAGAAGT GGGTAGAATC ACGGCCATCA AGTAAACGCC ACTGCGGATG ACAGAGGCCT AGCTGAGGAG GCTAGGGCCA 000320 000321 TGTCCTCCCA GCTGGCAGAG TCTGGACAGA GCCTCTGGTG GCCTCTGCCC TGTCATAGCC TAAGCTGCTG CAGCCACTGT 000400 000401 GAGAGGCCAC AGAGGGGAAG GGGACCCTGA CGCCGGGCGC TGCCGCCTGG GGGAGCATGG CACGATTGCT CTTAGTGTTG 000480 000481 AACTTTCTGT TTTGTCTCTT GCCCGTCCGG TTTTAGTTCC TGAAATTAAA GAAGTGGTGA GCCACAAGTA CAAGACACCA 000560 000561 ATGGCCCACG AAATCTGCTA CTCCGTATTA TGTCTCTTCT CGTACGTGGC TGCAGTTCAT AGCAGTGAGG AAGATCTCAG 000640 000641 AACCCCGCCC CGGCCTGTCT CTAGCTGATG GAGAGGGGCT ACGCAGCTGC CCCAGCCCAG GGCACGCCCC TGGCCCCTTG 000720 000721 CTGTTCCCAA GTGCACGATG CTGCTGTGAC TGAGGAGTGG ATGATGCTCG TGTGTCCTCT GCAAGCCCCC TGCTGTGGCT 000800 000801 TGGTTGGTTA CCGGTTATGT GTCCCTCTGA GTGTGTCTTG AGCGTGTCCA CCTTCTCCCT CTCCACTCCC AGAAGACCAA 000880 000881 ACTGCCTTCC CCTCAGGGCT CAAGAATGTG TACAGTCTGT GGGG |
Predicted Small Protein
| Name | NONHSAT021232_smProtein_560:667 |
| Length | 36 |
| Molecular weight | 3895.3981 |
| Aromaticity | 0.0857142857143 |
| Instability index | 73.0028571429 |
| Isoelectric point | 5.34783935547 |
| Runs | 7 |
| Runs residual | 0.0188861985472 |
| Runs probability | 0.0369066545538 |
| Amino acid sequence | MAHEICYSVLCLFSYVAAVHSSEEDLRTPPRPVSS |
| Secondary structure | LLEEEEHHHHHHHHEEEEELLLHHHLLLLLLLLLL |
| PRMN | - |
| PiMo | - |
