Difference between revisions of "NONHSAT021661"
(Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
|||
| Line 42: | Line 42: | ||
sequence = <dnaseq>ATCTCACATCTCCTTCAGAACTTACGCTGGAAAAACTCCAACAGCTTCATATGGACAGATGGACTTCAAATGCTGTTTGTATTCCAGAGACTAGGGAGAGTTGGCCCTATGCATGGGCAAACAGCTGGACTTTCCAAGGAAGGTTCAGACTAGCTGTGTTCAGCATTCAAGAAGGAAGATCCTCCCTCTTGCACAATTAGAGTGTCCCCATCGGTCTCCAGTGCGGCATCCCTTCCTTGCCTTCTACCTCTGTTCCACCCCCTTTCCTTCCTTTCCTCTCTGTACCATTCATTCTCCCTGACCGGCCTTTCTTGCCGAGGGTTCTGTGGCTCTTACCCTTGTGAAGCTTTTCCTTTAGCCTGGGACAGAAGGACCTCCCAGCCCCCAAAGGATCTCCCAGTGACCAAAGGATGCGAAGAGTGATAGTTACGTGCTCCTGACTGATCACACCGCAGACATTTAGATTTTTATACCCAAGGCACTTTAAAAAAATGTTTTATAAATAGAGAATAAATTGAATTCTTGTTCCATAAA</dnaseq>| | sequence = <dnaseq>ATCTCACATCTCCTTCAGAACTTACGCTGGAAAAACTCCAACAGCTTCATATGGACAGATGGACTTCAAATGCTGTTTGTATTCCAGAGACTAGGGAGAGTTGGCCCTATGCATGGGCAAACAGCTGGACTTTCCAAGGAAGGTTCAGACTAGCTGTGTTCAGCATTCAAGAAGGAAGATCCTCCCTCTTGCACAATTAGAGTGTCCCCATCGGTCTCCAGTGCGGCATCCCTTCCTTGCCTTCTACCTCTGTTCCACCCCCTTTCCTTCCTTTCCTCTCTGTACCATTCATTCTCCCTGACCGGCCTTTCTTGCCGAGGGTTCTGTGGCTCTTACCCTTGTGAAGCTTTTCCTTTAGCCTGGGACAGAAGGACCTCCCAGCCCCCAAAGGATCTCCCAGTGACCAAAGGATGCGAAGAGTGATAGTTACGTGCTCCTGACTGATCACACCGCAGACATTTAGATTTTTATACCCAAGGCACTTTAAAAAAATGTTTTATAAATAGAGAATAAATTGAATTCTTGTTCCATAAA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG008468]] |
Revision as of 13:39, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
| Transcript ID |
NONHSAT021661 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
534 nt |
| Genomic location |
chr11+:61135377..61136683 |
| Exon number |
2 |
| Exons |
61135377..61135470,61136244..61136683 |
| Genome context |
|
| Sequence |
000001 ATCTCACATC TCCTTCAGAA CTTACGCTGG AAAAACTCCA ACAGCTTCAT ATGGACAGAT GGACTTCAAA TGCTGTTTGT 000080
000081 ATTCCAGAGA CTAGGGAGAG TTGGCCCTAT GCATGGGCAA ACAGCTGGAC TTTCCAAGGA AGGTTCAGAC TAGCTGTGTT 000160 000161 CAGCATTCAA GAAGGAAGAT CCTCCCTCTT GCACAATTAG AGTGTCCCCA TCGGTCTCCA GTGCGGCATC CCTTCCTTGC 000240 000241 CTTCTACCTC TGTTCCACCC CCTTTCCTTC CTTTCCTCTC TGTACCATTC ATTCTCCCTG ACCGGCCTTT CTTGCCGAGG 000320 000321 GTTCTGTGGC TCTTACCCTT GTGAAGCTTT TCCTTTAGCC TGGGACAGAA GGACCTCCCA GCCCCCAAAG GATCTCCCAG 000400 000401 TGACCAAAGG ATGCGAAGAG TGATAGTTAC GTGCTCCTGA CTGATCACAC CGCAGACATT TAGATTTTTA TACCCAAGGC 000480 000481 ACTTTAAAAA AATGTTTTAT AAATAGAGAA TAAATTGAAT TCTTGTTCCA TAAA |
Predicted Small Protein
| Name | NONHSAT021661_smProtein_50:199 |
| Length | 50 |
| Molecular weight | 5803.4219 |
| Aromaticity | 0.163265306122 |
| Instability index | 46.6469387755 |
| Isoelectric point | 8.00006103516 |
| Runs | 9 |
| Runs residual | 0.0216216216216 |
| Runs probability | 0.032709179768 |
| Amino acid sequence | MDRWTSNAVCIPETRESWPYAWANSWTFQGRFRLAVFSIQEGRSSLLHN |
| Secondary structure | LLLLLLLLEELLLLLLLLLHHHHLLLEEEEEEEEEEEEEELLLEELLLL |
| PRMN | - |
| PiMo | - |
