Difference between revisions of "NONHSAT024173"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>ATATTTAATACTGTTTTCATTCCCTAGTGATGACTGGTTCTCCAGCCTCTGCTGTTTTAGTCATCTGGGTTATCGGGGCAGTGACCTAACAAGGGGCTATTTCTGCTTATTGACTTTGGCAGGGGGCTGTGTTTAAAGTTAACATCTTATCTTTCCAGCTATTGATCAACAGTCTATTTTAGTGCTCTCTCCTTGTGTTGCAGGTTGGAGGAGGTGACGTTAAAGGATTTTAAAGCAGCTATTGATCGGGAAGGAAATCACCGGTATCACTTCAAAGCACTGGATCCTGAGTTTGGCACTGTCAAAGAGGAGATTTTCCATGATGATGATGCCATCCCTGGATGGGAAGGGAAAATTGTAGCTTGGGTGGAAGAAGACCATGGAGAGAATTAATGCCAAGTATCAGATTGAGGGCTTATGGAACCTGGTCACTCCCTGGCTGCTTCACTCAGGAAAGGGAACTAAAACCAGAATACACTAAGAAGTTTCTAGTTTGTGTGCCAAAACAGAAGCTTCTCCAAGCATGATGGCCACAGGTCAGTCCTCTTTCTGTGCCTGGCATATCTGGTACTTAAAAT</dnaseq>| | sequence = <dnaseq>ATATTTAATACTGTTTTCATTCCCTAGTGATGACTGGTTCTCCAGCCTCTGCTGTTTTAGTCATCTGGGTTATCGGGGCAGTGACCTAACAAGGGGCTATTTCTGCTTATTGACTTTGGCAGGGGGCTGTGTTTAAAGTTAACATCTTATCTTTCCAGCTATTGATCAACAGTCTATTTTAGTGCTCTCTCCTTGTGTTGCAGGTTGGAGGAGGTGACGTTAAAGGATTTTAAAGCAGCTATTGATCGGGAAGGAAATCACCGGTATCACTTCAAAGCACTGGATCCTGAGTTTGGCACTGTCAAAGAGGAGATTTTCCATGATGATGATGCCATCCCTGGATGGGAAGGGAAAATTGTAGCTTGGGTGGAAGAAGACCATGGAGAGAATTAATGCCAAGTATCAGATTGAGGGCTTATGGAACCTGGTCACTCCCTGGCTGCTTCACTCAGGAAAGGGAACTAAAACCAGAATACACTAAGAAGTTTCTAGTTTGTGTGCCAAAACAGAAGCTTCTCCAAGCATGATGGCCACAGGTCAGTCCTCTTTCTGTGCCTGGCATATCTGGTACTTAAAAT</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG009609]] |
Revision as of 06:17, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT024173 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
578 nt |
| Genomic location |
chr11+:111888298..111889945 |
| Exon number |
2 |
| Exons |
111888298..111888609,111889680..111889945 |
| Genome context |
|
| Sequence |
000001 ATATTTAATA CTGTTTTCAT TCCCTAGTGA TGACTGGTTC TCCAGCCTCT GCTGTTTTAG TCATCTGGGT TATCGGGGCA 000080
000081 GTGACCTAAC AAGGGGCTAT TTCTGCTTAT TGACTTTGGC AGGGGGCTGT GTTTAAAGTT AACATCTTAT CTTTCCAGCT 000160 000161 ATTGATCAAC AGTCTATTTT AGTGCTCTCT CCTTGTGTTG CAGGTTGGAG GAGGTGACGT TAAAGGATTT TAAAGCAGCT 000240 000241 ATTGATCGGG AAGGAAATCA CCGGTATCAC TTCAAAGCAC TGGATCCTGA GTTTGGCACT GTCAAAGAGG AGATTTTCCA 000320 000321 TGATGATGAT GCCATCCCTG GATGGGAAGG GAAAATTGTA GCTTGGGTGG AAGAAGACCA TGGAGAGAAT TAATGCCAAG 000400 000401 TATCAGATTG AGGGCTTATG GAACCTGGTC ACTCCCTGGC TGCTTCACTC AGGAAAGGGA ACTAAAACCA GAATACACTA 000480 000481 AGAAGTTTCT AGTTTGTGTG CCAAAACAGA AGCTTCTCCA AGCATGATGG CCACAGGTCA GTCCTCTTTC TGTGCCTGGC 000560 000561 ATATCTGGTA CTTAAAAT |
Predicted Small Protein
| Name | NONHSAT024173_smProtein_341:526 |
| Length | 62 |
| Molecular weight | 7155.3837 |
| Aromaticity | 0.0983606557377 |
| Instability index | 45.3901639344 |
| Isoelectric point | 9.93817138672 |
| Runs | 11 |
| Runs residual | 0.0275108347466 |
| Runs probability | 0.028199322317 |
| Amino acid sequence | MGRENCSLGGRRPWRELMPSIRLRAYGTWSLPGCFTQERELKPEYTKKFLVCVPKQKLLQ A |
| Secondary structure | LLLLLLLLLLLLLHHHHLLLLEEEELLLLLLLLLLLLLEEELLLLLLEEEEEELLHHHLL L |
| PRMN | - |
| PiMo | - |
