Difference between revisions of "NONHSAT031172"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>GAACAGTGTGGGGGAGGCATGCACGGACATGAAGCGCGAGTACGACCAGTGCTTCAATCGCTGGTTCGCCGAGAAATTTCTCAAGGGGGACAGCTCCGGGGACCCGTGCACCGACCTCTTCAAGCGCTACCAGCAGTGTGTTCAGGTGAGCCCTCCCGCCTCTGTTCCCAGGCCCTGCATTCTCGGCGCTGTGTCCCACCACACTCATCGTATTTTACGGGGATTGGGACTGGACTGGAAGGGTGGAGAAAAGTCGCAGTGAGGCCAGTGGCAGGAGCTCGCTCCCCTACCATCACCACCGAGGCCACTTGGGTGTCTCTCCGAATGACAAATATTGGGGCAGTGCTTTTCAAGaagcacagtcacatcctttggttcatttggtgttcaccctaaactcgcaagAAAGCAATAAAGGAGAAAGAGATTCCTATTGAAGGACTGGAGTTCATGGGCCATGGCAAAGAAAAGCCTGAAAATTCTTCTTGACCTTGACAGTCACCTTGAAGGATTTCGCAAGTCCAGAAATTGAGGACTCTGGATTTTTGTCAACTAACTCTGTGAACATAGCCATCAGATTTGATGAGGAACTTAGGAGAGAGGAGTTTTATTTCCTCCTTCGATGTTTTCCTCTCAGTTGTAAAAGATGAACTCTTTGAGATGATTTCTCACCTGCTGTGGTATCTTGCAGGAACTGTGTGCTAAAATTGAACAATTTTTTTGAGATTATGGTTGCAATACTTGGCGTGGAATCAGCTTTACATAAATATACCTTGTATGCAAACGATGATAAACTAGTCAGGATGAGCAGAGCTGCCTGACCTCTTGATTTCTGCTGCAAAAGACATATACACTGTACTGGGGTCACTATTTATGAAAGCAATTGGTTAGGACCTCTTTTTTTCCTCTCAGGGAACTAATGCTCTGAAAAGGGATCTGGGCACAACAGTTTCAGTGAGTGCTTTTGAGCACACTTTTATTTTTATATAGTAACTAATGGTTAAGATTGATGGTGGCCTGGATTAGCAAAGAGGAAGACAGCTTTTAACACAGTTCCCTGCCTTCACAAGAGGTGTCAGATTAAGATGTGAAAGCTGCAAGAATGTTGCAGTGAACACCATTTCAGAGCTCTCAGTGTGCAGTTCAGGAATTA</dnaseq>| | sequence = <dnaseq>GAACAGTGTGGGGGAGGCATGCACGGACATGAAGCGCGAGTACGACCAGTGCTTCAATCGCTGGTTCGCCGAGAAATTTCTCAAGGGGGACAGCTCCGGGGACCCGTGCACCGACCTCTTCAAGCGCTACCAGCAGTGTGTTCAGGTGAGCCCTCCCGCCTCTGTTCCCAGGCCCTGCATTCTCGGCGCTGTGTCCCACCACACTCATCGTATTTTACGGGGATTGGGACTGGACTGGAAGGGTGGAGAAAAGTCGCAGTGAGGCCAGTGGCAGGAGCTCGCTCCCCTACCATCACCACCGAGGCCACTTGGGTGTCTCTCCGAATGACAAATATTGGGGCAGTGCTTTTCAAGaagcacagtcacatcctttggttcatttggtgttcaccctaaactcgcaagAAAGCAATAAAGGAGAAAGAGATTCCTATTGAAGGACTGGAGTTCATGGGCCATGGCAAAGAAAAGCCTGAAAATTCTTCTTGACCTTGACAGTCACCTTGAAGGATTTCGCAAGTCCAGAAATTGAGGACTCTGGATTTTTGTCAACTAACTCTGTGAACATAGCCATCAGATTTGATGAGGAACTTAGGAGAGAGGAGTTTTATTTCCTCCTTCGATGTTTTCCTCTCAGTTGTAAAAGATGAACTCTTTGAGATGATTTCTCACCTGCTGTGGTATCTTGCAGGAACTGTGTGCTAAAATTGAACAATTTTTTTGAGATTATGGTTGCAATACTTGGCGTGGAATCAGCTTTACATAAATATACCTTGTATGCAAACGATGATAAACTAGTCAGGATGAGCAGAGCTGCCTGACCTCTTGATTTCTGCTGCAAAAGACATATACACTGTACTGGGGTCACTATTTATGAAAGCAATTGGTTAGGACCTCTTTTTTTCCTCTCAGGGAACTAATGCTCTGAAAAGGGATCTGGGCACAACAGTTTCAGTGAGTGCTTTTGAGCACACTTTTATTTTTATATAGTAACTAATGGTTAAGATTGATGGTGGCCTGGATTAGCAAAGAGGAAGACAGCTTTTAACACAGTTCCCTGCCTTCACAAGAGGTGTCAGATTAAGATGTGAAAGCTGCAAGAATGTTGCAGTGAACACCATTTCAGAGCTCTCAGTGTGCAGTTCAGGAATTA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG012515]] |
Revision as of 09:22, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT031172 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
1153 nt |
| Genomic location |
chr12-:120882011..120884173 |
| Exon number |
2 |
| Exons |
120882011..120882758,120883769..120884173 |
| Genome context |
|
| Sequence |
000001 GAACAGTGTG GGGGAGGCAT GCACGGACAT GAAGCGCGAG TACGACCAGT GCTTCAATCG CTGGTTCGCC GAGAAATTTC 000080
000081 TCAAGGGGGA CAGCTCCGGG GACCCGTGCA CCGACCTCTT CAAGCGCTAC CAGCAGTGTG TTCAGGTGAG CCCTCCCGCC 000160 000161 TCTGTTCCCA GGCCCTGCAT TCTCGGCGCT GTGTCCCACC ACACTCATCG TATTTTACGG GGATTGGGAC TGGACTGGAA 000240 000241 GGGTGGAGAA AAGTCGCAGT GAGGCCAGTG GCAGGAGCTC GCTCCCCTAC CATCACCACC GAGGCCACTT GGGTGTCTCT 000320 000321 CCGAATGACA AATATTGGGG CAGTGCTTTT CAAGaagcac agtcacatcc tttggttcat ttggtgttca ccctaaactc 000400 000401 gcaagAAAGC AATAAAGGAG AAAGAGATTC CTATTGAAGG ACTGGAGTTC ATGGGCCATG GCAAAGAAAA GCCTGAAAAT 000480 000481 TCTTCTTGAC CTTGACAGTC ACCTTGAAGG ATTTCGCAAG TCCAGAAATT GAGGACTCTG GATTTTTGTC AACTAACTCT 000560 000561 GTGAACATAG CCATCAGATT TGATGAGGAA CTTAGGAGAG AGGAGTTTTA TTTCCTCCTT CGATGTTTTC CTCTCAGTTG 000640 000641 TAAAAGATGA ACTCTTTGAG ATGATTTCTC ACCTGCTGTG GTATCTTGCA GGAACTGTGT GCTAAAATTG AACAATTTTT 000720 000721 TTGAGATTAT GGTTGCAATA CTTGGCGTGG AATCAGCTTT ACATAAATAT ACCTTGTATG CAAACGATGA TAAACTAGTC 000800 000801 AGGATGAGCA GAGCTGCCTG ACCTCTTGAT TTCTGCTGCA AAAGACATAT ACACTGTACT GGGGTCACTA TTTATGAAAG 000880 000881 CAATTGGTTA GGACCTCTTT TTTTCCTCTC AGGGAACTAA TGCTCTGAAA AGGGATCTGG GCACAACAGT TTCAGTGAGT 000960 000961 GCTTTTGAGC ACACTTTTAT TTTTATATAG TAACTAATGG TTAAGATTGA TGGTGGCCTG GATTAGCAAA GAGGAAGACA 001040 001041 GCTTTTAACA CAGTTCCCTG CCTTCACAAG AGGTGTCAGA TTAAGATGTG AAAGCTGCAA GAATGTTGCA GTGAACACCA 001120 001121 TTTCAGAGCT CTCAGTGTGC AGTTCAGGAA TTA |
Predicted Small Protein
| Name | NONHSAT031172_smProtein_728:820 |
| Length | 31 |
| Molecular weight | 3336.8807 |
| Aromaticity | 0.0666666666667 |
| Instability index | 50.87 |
| Isoelectric point | 8.21038818359 |
| Runs | 6 |
| Runs residual | 0.00225225225225 |
| Runs probability | 0.0253047164812 |
| Amino acid sequence | MVAILGVESALHKYTLYANDDKLVRMSRAA |
| Secondary structure | LEEEEHHHHHHHHHHHHHLHHHHHHHHHHL |
| PRMN | - |
| PiMo | - |
