Difference between revisions of "NONHSAT034163"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>gacaaataagggaatatatgctggccacctcagccagggatggcaacccgctggggtctccttccgctgtgtggaagggttgtttttctgctcttcgcaataaatcttgctgctgctcattctttgggtcgccgccgccttttatgagttgtagcactcaccgcgaaggtctgcagcttcactcctgaagccagctagagccagcgagaccacgaacccactgggagggatgaacaactccggactcgccacctttatgaactgttaacactcacagcgaaggtctgcagcttcactcctgaagccagcgagaccacaaacccactaggaggaatgcacaactcctgatgccctgcctttaaaagctgtaacggtcactgcgaaggtctgcggcttcattcctgaagtcagcgaaaccacgaacccacctgaaggaagaaactccggacacatccgaacatcagaaggaacaaactctggacacaccatctttaactgtaacactcaccacgagggtccgcagcttcattcttaaagtcagcgagaccaagaacccaccaattccggacacGCAAGTATTCGTAACgttcttctgttccaagaaaaatggtcttcttacttccttgatggctcacaacatgctcctttctactgcaggaacactgtataacttctgtcaagcatgaactccccacctctgtttgacatacttctctactttcagaactcagctgaactatcgcttctcaagggagcactcaaacttcctgaacagagtaagagatttg</dnaseq>| | sequence = <dnaseq>gacaaataagggaatatatgctggccacctcagccagggatggcaacccgctggggtctccttccgctgtgtggaagggttgtttttctgctcttcgcaataaatcttgctgctgctcattctttgggtcgccgccgccttttatgagttgtagcactcaccgcgaaggtctgcagcttcactcctgaagccagctagagccagcgagaccacgaacccactgggagggatgaacaactccggactcgccacctttatgaactgttaacactcacagcgaaggtctgcagcttcactcctgaagccagcgagaccacaaacccactaggaggaatgcacaactcctgatgccctgcctttaaaagctgtaacggtcactgcgaaggtctgcggcttcattcctgaagtcagcgaaaccacgaacccacctgaaggaagaaactccggacacatccgaacatcagaaggaacaaactctggacacaccatctttaactgtaacactcaccacgagggtccgcagcttcattcttaaagtcagcgagaccaagaacccaccaattccggacacGCAAGTATTCGTAACgttcttctgttccaagaaaaatggtcttcttacttccttgatggctcacaacatgctcctttctactgcaggaacactgtataacttctgtcaagcatgaactccccacctctgtttgacatacttctctactttcagaactcagctgaactatcgcttctcaagggagcactcaaacttcctgaacagagtaagagatttg</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG013680]] |
Revision as of 10:22, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT034163 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
788 nt |
Genomic location |
chr13+:64167530..64184581 |
Exon number |
2 |
Exons |
64167530..64168115,64184380..64184581 |
Genome context |
|
Sequence |
000001 gacaaataag ggaatatatg ctggccacct cagccaggga tggcaacccg ctggggtctc cttccgctgt gtggaagggt 000080
000081 tgtttttctg ctcttcgcaa taaatcttgc tgctgctcat tctttgggtc gccgccgcct tttatgagtt gtagcactca 000160 000161 ccgcgaaggt ctgcagcttc actcctgaag ccagctagag ccagcgagac cacgaaccca ctgggaggga tgaacaactc 000240 000241 cggactcgcc acctttatga actgttaaca ctcacagcga aggtctgcag cttcactcct gaagccagcg agaccacaaa 000320 000321 cccactagga ggaatgcaca actcctgatg ccctgccttt aaaagctgta acggtcactg cgaaggtctg cggcttcatt 000400 000401 cctgaagtca gcgaaaccac gaacccacct gaaggaagaa actccggaca catccgaaca tcagaaggaa caaactctgg 000480 000481 acacaccatc tttaactgta acactcacca cgagggtccg cagcttcatt cttaaagtca gcgagaccaa gaacccacca 000560 000561 attccggaca cGCAAGTATT CGTAACgttc ttctgttcca agaaaaatgg tcttcttact tccttgatgg ctcacaacat 000640 000641 gctcctttct actgcaggaa cactgtataa cttctgtcaa gcatgaactc cccacctctg tttgacatac ttctctactt 000720 000721 tcagaactca gctgaactat cgcttctcaa gggagcactc aaacttcctg aacagagtaa gagatttg |
Predicted Small Protein
Name | NONHSAT034163_smProtein_17:187 |
Length | 57 |
Molecular weight | 5963.7869 |
Aromaticity | 0.0892857142857 |
Instability index | 70.9071428571 |
Isoelectric point | 8.78802490234 |
Runs | 7 |
Runs residual | 0.0282982045277 |
Runs probability | 0.0140686905393 |
Amino acid sequence | MLATSARDGNPLGSPSAVWKGCFSALRNKSCCCSFFGSPPPFMSCSTHREGLQLHS |
Secondary structure | LLLLLLLLLLLLLLHHHHHHHHHHHHLLLLEEELLLLLLLLLLLLLLLLLLLEELL |
PRMN | - |
PiMo | - |