Difference between revisions of "NONHSAT035141"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>AGGTTATGCGGCACCCCCCGCGCGGGCTGCTGGCTCAGTCCCCCTGCTTGCTGTATCTGCGTCTGGGGACCGCCACCACCCGCATCTGTCTCCACGTGGTGGCCATCCAGGACTCTCAGTGACGACACCGCAGACGGTTGAGCTGGGAGCCCTCACACACTTGCAGGCATCATCATCCCAGCAGGCATGGTGGAGTCTGGGGAGATGCGCAGGAATTCCCGCGGGCTCTTAGAGTCTAGTGTTCAGTGGAAATTCGTGCTGGGGATAAAGAATGGCCCTGGCTGGAGTGGAATTTCGATGACTGCCACATCATCTTCAGGAACTCCATTGTATTCTACGGGCAGCTCCCAAACCCAAGACTGCTGGCAGCAGAAAGGCCTCCAGGAAGGCACCTAGTGACGTAGATAACAAATCCGTTTTATGTGCCACATTTCCTCATAGGATGTGCATAGGATCTCCTTTCCTGAAAGCCAGGACTGGCATGCAGCTCCCTGGTTTGGGGTTGCAGCCACCTGTGTGGAGTCAGTTGTCTGGGCTGTGTCCTTGTCACCAGAATCAGCTCCCCTGACTCTCAGCGTCACACACTTCCTGATCCCAGGCTCACGCGCTGTGAAGCCTGGTGAAAGCACATGTGTCGTCTCTCCTGGGTTCACAGCCTGAGCTGTGCGCTATGAATGCGACTGCACACAGCTGTAGTTTAGGGTGCCTCAGGCTCAACACTGTGTGAGACTTGTTTTTGACTACTTTAATACTTTTCTTTATTTAGAATGTACCCCACACCTTTTCTGGCTTTGTGATGTACTCAAATTGCCTTCGTAGAATTAGGAAATCTGCATATGGAAAATAAACCAAAATCGTATTGC</dnaseq>| | sequence = <dnaseq>AGGTTATGCGGCACCCCCCGCGCGGGCTGCTGGCTCAGTCCCCCTGCTTGCTGTATCTGCGTCTGGGGACCGCCACCACCCGCATCTGTCTCCACGTGGTGGCCATCCAGGACTCTCAGTGACGACACCGCAGACGGTTGAGCTGGGAGCCCTCACACACTTGCAGGCATCATCATCCCAGCAGGCATGGTGGAGTCTGGGGAGATGCGCAGGAATTCCCGCGGGCTCTTAGAGTCTAGTGTTCAGTGGAAATTCGTGCTGGGGATAAAGAATGGCCCTGGCTGGAGTGGAATTTCGATGACTGCCACATCATCTTCAGGAACTCCATTGTATTCTACGGGCAGCTCCCAAACCCAAGACTGCTGGCAGCAGAAAGGCCTCCAGGAAGGCACCTAGTGACGTAGATAACAAATCCGTTTTATGTGCCACATTTCCTCATAGGATGTGCATAGGATCTCCTTTCCTGAAAGCCAGGACTGGCATGCAGCTCCCTGGTTTGGGGTTGCAGCCACCTGTGTGGAGTCAGTTGTCTGGGCTGTGTCCTTGTCACCAGAATCAGCTCCCCTGACTCTCAGCGTCACACACTTCCTGATCCCAGGCTCACGCGCTGTGAAGCCTGGTGAAAGCACATGTGTCGTCTCTCCTGGGTTCACAGCCTGAGCTGTGCGCTATGAATGCGACTGCACACAGCTGTAGTTTAGGGTGCCTCAGGCTCAACACTGTGTGAGACTTGTTTTTGACTACTTTAATACTTTTCTTTATTTAGAATGTACCCCACACCTTTTCTGGCTTTGTGATGTACTCAAATTGCCTTCGTAGAATTAGGAAATCTGCATATGGAAAATAAACCAAAATCGTATTGC</dnaseq>| | ||
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| − | [[Category:Intronic(S)]] | + | [[Category:Intronic(S)]][[Category:NONHSAG014172]] |
Revision as of 10:43, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT035141 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
intronic(S) |
| Length |
863 nt |
| Genomic location |
chr13-:110917598..110918460 |
| Exon number |
1 |
| Exons |
110917598..110918460 |
| Genome context |
|
| Sequence |
000001 AGGTTATGCG GCACCCCCCG CGCGGGCTGC TGGCTCAGTC CCCCTGCTTG CTGTATCTGC GTCTGGGGAC CGCCACCACC 000080
000081 CGCATCTGTC TCCACGTGGT GGCCATCCAG GACTCTCAGT GACGACACCG CAGACGGTTG AGCTGGGAGC CCTCACACAC 000160 000161 TTGCAGGCAT CATCATCCCA GCAGGCATGG TGGAGTCTGG GGAGATGCGC AGGAATTCCC GCGGGCTCTT AGAGTCTAGT 000240 000241 GTTCAGTGGA AATTCGTGCT GGGGATAAAG AATGGCCCTG GCTGGAGTGG AATTTCGATG ACTGCCACAT CATCTTCAGG 000320 000321 AACTCCATTG TATTCTACGG GCAGCTCCCA AACCCAAGAC TGCTGGCAGC AGAAAGGCCT CCAGGAAGGC ACCTAGTGAC 000400 000401 GTAGATAACA AATCCGTTTT ATGTGCCACA TTTCCTCATA GGATGTGCAT AGGATCTCCT TTCCTGAAAG CCAGGACTGG 000480 000481 CATGCAGCTC CCTGGTTTGG GGTTGCAGCC ACCTGTGTGG AGTCAGTTGT CTGGGCTGTG TCCTTGTCAC CAGAATCAGC 000560 000561 TCCCCTGACT CTCAGCGTCA CACACTTCCT GATCCCAGGC TCACGCGCTG TGAAGCCTGG TGAAAGCACA TGTGTCGTCT 000640 000641 CTCCTGGGTT CACAGCCTGA GCTGTGCGCT ATGAATGCGA CTGCACACAG CTGTAGTTTA GGGTGCCTCA GGCTCAACAC 000720 000721 TGTGTGAGAC TTGTTTTTGA CTACTTTAAT ACTTTTCTTT ATTTAGAATG TACCCCACAC CTTTTCTGGC TTTGTGATGT 000800 000801 ACTCAAATTG CCTTCGTAGA ATTAGGAAAT CTGCATATGG AAAATAAACC AAAATCGTAT TGC |
Predicted Small Protein
| Name | NONHSAT035141_smProtein_5:121 |
| Length | 39 |
| Molecular weight | 4229.9953 |
| Aromaticity | 0.0263157894737 |
| Instability index | 62.2315789474 |
| Isoelectric point | 9.68438720703 |
| Runs | 6 |
| Runs residual | 0.014716066482 |
| Runs probability | 0.0474297827239 |
| Amino acid sequence | MRHPPRGLLAQSPCLLYLRLGTATTRICLHVVAIQDSQ |
| Secondary structure | LLLLLLLLLLLLHHHHHHHLLLHHHEEEEEEEEEELLL |
| PRMN | - |
| PiMo | - |
