Difference between revisions of "NONHSAT035902"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>AGAGGAAATCCGTGATGCTCGGCATCCCCATGTTACCCGCCAGAGTCAGGAGGACCAACACAGGATTAACTATGAGGAGAGCATGATGGTGCGTTTGAGCGTCAGTAAGCGAGAGAAAGGACGGCGAAAACGAGCAAATGTCATGAGCTCACAACTTCATTCCCTTACACACTTCAGTGACATCAGTGCTTTGACAGGGGGAACTGTTCATCTTGATGAGGTGAGGTTGAGATATGGTTGTAGTAGGATGTGACTTTCATGCTTTCAGCAAAATGTATGTGGGGCTTATTACCATGAGGAACTTGGGAAGGGATGCTGGCTCTCAGAACCACAGTGCCATTCCATCACTTCTCCATCTGTCTCCAGGATCAGAATCCTATTAAGAAGCGGAAGAAGATACCTCAGAAAGGTCGGAAGAAAAAAGGTTTTCGGAGGCGGCGGTGATTATGGGTGT</dnaseq>| | sequence = <dnaseq>AGAGGAAATCCGTGATGCTCGGCATCCCCATGTTACCCGCCAGAGTCAGGAGGACCAACACAGGATTAACTATGAGGAGAGCATGATGGTGCGTTTGAGCGTCAGTAAGCGAGAGAAAGGACGGCGAAAACGAGCAAATGTCATGAGCTCACAACTTCATTCCCTTACACACTTCAGTGACATCAGTGCTTTGACAGGGGGAACTGTTCATCTTGATGAGGTGAGGTTGAGATATGGTTGTAGTAGGATGTGACTTTCATGCTTTCAGCAAAATGTATGTGGGGCTTATTACCATGAGGAACTTGGGAAGGGATGCTGGCTCTCAGAACCACAGTGCCATTCCATCACTTCTCCATCTGTCTCCAGGATCAGAATCCTATTAAGAAGCGGAAGAAGATACCTCAGAAAGGTCGGAAGAAAAAAGGTTTTCGGAGGCGGCGGTGATTATGGGTGT</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG014498]] |
Revision as of 11:06, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT035902 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
454 nt |
| Genomic location |
chr14+:23945554..23947245 |
| Exon number |
3 |
| Exons |
23945554..23945616,23946409..23946769,23947216..23947245 |
| Genome context |
|
| Sequence |
000001 AGAGGAAATC CGTGATGCTC GGCATCCCCA TGTTACCCGC CAGAGTCAGG AGGACCAACA CAGGATTAAC TATGAGGAGA 000080
000081 GCATGATGGT GCGTTTGAGC GTCAGTAAGC GAGAGAAAGG ACGGCGAAAA CGAGCAAATG TCATGAGCTC ACAACTTCAT 000160 000161 TCCCTTACAC ACTTCAGTGA CATCAGTGCT TTGACAGGGG GAACTGTTCA TCTTGATGAG GTGAGGTTGA GATATGGTTG 000240 000241 TAGTAGGATG TGACTTTCAT GCTTTCAGCA AAATGTATGT GGGGCTTATT ACCATGAGGA ACTTGGGAAG GGATGCTGGC 000320 000321 TCTCAGAACC ACAGTGCCAT TCCATCACTT CTCCATCTGT CTCCAGGATC AGAATCCTAT TAAGAAGCGG AAGAAGATAC 000400 000401 CTCAGAAAGG TCGGAAGAAA AAAGGTTTTC GGAGGCGGCG GTGATTATGG GTGT |
Predicted Small Protein
| Name | NONHSAT035902_smProtein_233:382 |
| Length | 50 |
| Molecular weight | 5295.0178 |
| Aromaticity | 0.0816326530612 |
| Instability index | 45.2897959184 |
| Isoelectric point | 6.80572509766 |
| Runs | 8 |
| Runs residual | 0.00121345835632 |
| Runs probability | 0.0490196078432 |
| Amino acid sequence | MVVVGCDFHAFSKMYVGLITMRNLGRDAGSQNHSAIPSLLHLSPGSESY |
| Secondary structure | LEEEEELLLLLLLLEEEEHHHHHLLLLLLLLLLLLLLLLEELLLLLLLL |
| PRMN | - |
| PiMo | - |
