Difference between revisions of "NONHSAT036036"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>CCCAACGCCCAGGTGCCCCGGCTCGCGCTCTGGCCCGGGCGAATCGGGCTATAGGAAGGGCCACACGGATGGAAGTCCTAGTCCGGGTGCTCACCTCTTGTGGAACGTGCAAAGCCTGTCCCAGGACCTCTTTACACTCTGGGGGTCTCTGCCCAGGCACGCTTGCTGCTTCCGGACACAGCTGTGGGCGGAGCTAGTAGGGGCGGGGCTACGTGATTGACACTTCTCTCCTCAGACTTCAAGGGCTACCACTGGACCCTTCCCCTGTCTTGAACCCTGAGCCGGCACCATGGTGAGAACCCTGAGCCCAGCCCTTCACCTCCGCAGGCCCGCGCCCTCACCCCCAGTGGCAGTGCCATGGTTGCCCCGTATGAACCTAGGGCTCCACAGTGTGGGGTTTTTGCAGGTCAGCTTCTGCAAGGCAACCTGCACTCTTCCAACCCGTTCATCCTTGTAGCACGGACGCCTGAAGGTGAAGACGTCAGAAGAGCAGGCGGAGGCCAAAAGGCTAGAGCGAGAGCAGAAGCTGAAGCTATACCAGTCAGCCACCCAGGCCGTATTCCAGAAGCGCCAGGCTGGTGAGCTGGATGAGTCCGTGCTGGAACTGACAAGCCAGATTCTGGGAGCCAACCCTGATTTTGCCACCCTCTGGAACTGCCGACGAGAGGTGCTCCAGCA</dnaseq>| | sequence = <dnaseq>CCCAACGCCCAGGTGCCCCGGCTCGCGCTCTGGCCCGGGCGAATCGGGCTATAGGAAGGGCCACACGGATGGAAGTCCTAGTCCGGGTGCTCACCTCTTGTGGAACGTGCAAAGCCTGTCCCAGGACCTCTTTACACTCTGGGGGTCTCTGCCCAGGCACGCTTGCTGCTTCCGGACACAGCTGTGGGCGGAGCTAGTAGGGGCGGGGCTACGTGATTGACACTTCTCTCCTCAGACTTCAAGGGCTACCACTGGACCCTTCCCCTGTCTTGAACCCTGAGCCGGCACCATGGTGAGAACCCTGAGCCCAGCCCTTCACCTCCGCAGGCCCGCGCCCTCACCCCCAGTGGCAGTGCCATGGTTGCCCCGTATGAACCTAGGGCTCCACAGTGTGGGGTTTTTGCAGGTCAGCTTCTGCAAGGCAACCTGCACTCTTCCAACCCGTTCATCCTTGTAGCACGGACGCCTGAAGGTGAAGACGTCAGAAGAGCAGGCGGAGGCCAAAAGGCTAGAGCGAGAGCAGAAGCTGAAGCTATACCAGTCAGCCACCCAGGCCGTATTCCAGAAGCGCCAGGCTGGTGAGCTGGATGAGTCCGTGCTGGAACTGACAAGCCAGATTCTGGGAGCCAACCCTGATTTTGCCACCCTCTGGAACTGCCGACGAGAGGTGCTCCAGCA</dnaseq>| | ||
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− | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG014548]] |
Revision as of 11:11, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT036036 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
678 nt |
Genomic location |
chr14-:24739555..24740610 |
Exon number |
2 |
Exons |
24739555..24739664,24740043..24740610 |
Genome context |
|
Sequence |
000001 CCCAACGCCC AGGTGCCCCG GCTCGCGCTC TGGCCCGGGC GAATCGGGCT ATAGGAAGGG CCACACGGAT GGAAGTCCTA 000080
000081 GTCCGGGTGC TCACCTCTTG TGGAACGTGC AAAGCCTGTC CCAGGACCTC TTTACACTCT GGGGGTCTCT GCCCAGGCAC 000160 000161 GCTTGCTGCT TCCGGACACA GCTGTGGGCG GAGCTAGTAG GGGCGGGGCT ACGTGATTGA CACTTCTCTC CTCAGACTTC 000240 000241 AAGGGCTACC ACTGGACCCT TCCCCTGTCT TGAACCCTGA GCCGGCACCA TGGTGAGAAC CCTGAGCCCA GCCCTTCACC 000320 000321 TCCGCAGGCC CGCGCCCTCA CCCCCAGTGG CAGTGCCATG GTTGCCCCGT ATGAACCTAG GGCTCCACAG TGTGGGGTTT 000400 000401 TTGCAGGTCA GCTTCTGCAA GGCAACCTGC ACTCTTCCAA CCCGTTCATC CTTGTAGCAC GGACGCCTGA AGGTGAAGAC 000480 000481 GTCAGAAGAG CAGGCGGAGG CCAAAAGGCT AGAGCGAGAG CAGAAGCTGA AGCTATACCA GTCAGCCACC CAGGCCGTAT 000560 000561 TCCAGAAGCG CCAGGCTGGT GAGCTGGATG AGTCCGTGCT GGAACTGACA AGCCAGATTC TGGGAGCCAA CCCTGATTTT 000640 000641 GCCACCCTCT GGAACTGCCG ACGAGAGGTG CTCCAGCA |
Predicted Small Protein
Name | NONHSAT036036_smProtein_68:196 |
Length | 43 |
Molecular weight | 4204.8801 |
Aromaticity | 0.0 |
Instability index | 52.480952381 |
Isoelectric point | 8.80792236328 |
Runs | 6 |
Runs residual | 0.0333031946956 |
Runs probability | 0.0427927927927 |
Amino acid sequence | MEVLVRVLTSCGTCKACPRTSLHSGGLCPGTLAASGHSCGRS |
Secondary structure | LEEEEEEELLLLLLLLLLLLLLLLLLLLHHHHEELLLLLLLL |
PRMN | - |
PiMo | - |