Difference between revisions of "NONHSAT036036"

From LncRNAWiki
Jump to: navigation, search
(Created page with "Please input one-sentence summary here. ==Annotated Information== ===Transcriptomic Nomeclature=== Please input transcriptomic nomeclature information here. ===Functio...")
 
Line 42: Line 42:
 
sequence = <dnaseq>CCCAACGCCCAGGTGCCCCGGCTCGCGCTCTGGCCCGGGCGAATCGGGCTATAGGAAGGGCCACACGGATGGAAGTCCTAGTCCGGGTGCTCACCTCTTGTGGAACGTGCAAAGCCTGTCCCAGGACCTCTTTACACTCTGGGGGTCTCTGCCCAGGCACGCTTGCTGCTTCCGGACACAGCTGTGGGCGGAGCTAGTAGGGGCGGGGCTACGTGATTGACACTTCTCTCCTCAGACTTCAAGGGCTACCACTGGACCCTTCCCCTGTCTTGAACCCTGAGCCGGCACCATGGTGAGAACCCTGAGCCCAGCCCTTCACCTCCGCAGGCCCGCGCCCTCACCCCCAGTGGCAGTGCCATGGTTGCCCCGTATGAACCTAGGGCTCCACAGTGTGGGGTTTTTGCAGGTCAGCTTCTGCAAGGCAACCTGCACTCTTCCAACCCGTTCATCCTTGTAGCACGGACGCCTGAAGGTGAAGACGTCAGAAGAGCAGGCGGAGGCCAAAAGGCTAGAGCGAGAGCAGAAGCTGAAGCTATACCAGTCAGCCACCCAGGCCGTATTCCAGAAGCGCCAGGCTGGTGAGCTGGATGAGTCCGTGCTGGAACTGACAAGCCAGATTCTGGGAGCCAACCCTGATTTTGCCACCCTCTGGAACTGCCGACGAGAGGTGCTCCAGCA</dnaseq>|
 
sequence = <dnaseq>CCCAACGCCCAGGTGCCCCGGCTCGCGCTCTGGCCCGGGCGAATCGGGCTATAGGAAGGGCCACACGGATGGAAGTCCTAGTCCGGGTGCTCACCTCTTGTGGAACGTGCAAAGCCTGTCCCAGGACCTCTTTACACTCTGGGGGTCTCTGCCCAGGCACGCTTGCTGCTTCCGGACACAGCTGTGGGCGGAGCTAGTAGGGGCGGGGCTACGTGATTGACACTTCTCTCCTCAGACTTCAAGGGCTACCACTGGACCCTTCCCCTGTCTTGAACCCTGAGCCGGCACCATGGTGAGAACCCTGAGCCCAGCCCTTCACCTCCGCAGGCCCGCGCCCTCACCCCCAGTGGCAGTGCCATGGTTGCCCCGTATGAACCTAGGGCTCCACAGTGTGGGGTTTTTGCAGGTCAGCTTCTGCAAGGCAACCTGCACTCTTCCAACCCGTTCATCCTTGTAGCACGGACGCCTGAAGGTGAAGACGTCAGAAGAGCAGGCGGAGGCCAAAAGGCTAGAGCGAGAGCAGAAGCTGAAGCTATACCAGTCAGCCACCCAGGCCGTATTCCAGAAGCGCCAGGCTGGTGAGCTGGATGAGTCCGTGCTGGAACTGACAAGCCAGATTCTGGGAGCCAACCCTGATTTTGCCACCCTCTGGAACTGCCGACGAGAGGTGCTCCAGCA</dnaseq>|
 
}}
 
}}
[[Category:Sense]]
+
[[Category:Sense]][[Category:NONHSAG014548]]

Revision as of 11:11, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT036036

Source

NONCODE4.0

Same with

,

Classification

sense

Length

678 nt

Genomic location

chr14-:24739555..24740610

Exon number

2

Exons

24739555..24739664,24740043..24740610

Genome context

Sequence
000001 CCCAACGCCC AGGTGCCCCG GCTCGCGCTC TGGCCCGGGC GAATCGGGCT ATAGGAAGGG CCACACGGAT GGAAGTCCTA 000080
000081 GTCCGGGTGC TCACCTCTTG TGGAACGTGC AAAGCCTGTC CCAGGACCTC TTTACACTCT GGGGGTCTCT GCCCAGGCAC 000160
000161 GCTTGCTGCT TCCGGACACA GCTGTGGGCG GAGCTAGTAG GGGCGGGGCT ACGTGATTGA CACTTCTCTC CTCAGACTTC 000240
000241 AAGGGCTACC ACTGGACCCT TCCCCTGTCT TGAACCCTGA GCCGGCACCA TGGTGAGAAC CCTGAGCCCA GCCCTTCACC 000320
000321 TCCGCAGGCC CGCGCCCTCA CCCCCAGTGG CAGTGCCATG GTTGCCCCGT ATGAACCTAG GGCTCCACAG TGTGGGGTTT 000400
000401 TTGCAGGTCA GCTTCTGCAA GGCAACCTGC ACTCTTCCAA CCCGTTCATC CTTGTAGCAC GGACGCCTGA AGGTGAAGAC 000480
000481 GTCAGAAGAG CAGGCGGAGG CCAAAAGGCT AGAGCGAGAG CAGAAGCTGA AGCTATACCA GTCAGCCACC CAGGCCGTAT 000560
000561 TCCAGAAGCG CCAGGCTGGT GAGCTGGATG AGTCCGTGCT GGAACTGACA AGCCAGATTC TGGGAGCCAA CCCTGATTTT 000640
000641 GCCACCCTCT GGAACTGCCG ACGAGAGGTG CTCCAGCA
[back to top]

Predicted Small Protein

Name NONHSAT036036_smProtein_68:196
Length 43
Molecular weight 4204.8801
Aromaticity 0.0
Instability index 52.480952381
Isoelectric point 8.80792236328
Runs 6
Runs residual 0.0333031946956
Runs probability 0.0427927927927
Amino acid sequence MEVLVRVLTSCGTCKACPRTSLHSGGLCPGTLAASGHSCGRS
Secondary structure LEEEEEEELLLLLLLLLLLLLLLLLLLLHHHHEELLLLLLLL
PRMN -
PiMo -