Difference between revisions of "NONHSAT037103"
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==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
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sequence = <dnaseq>CAGTCGTCCCTTTGTCTTTTGAAGTTACTCCCACTGTGGAAGAACAAATGGACACAGTCACAGGGCCAAATGAGGAGTTCACACCAGTTCTGGGATCTCCAGTGACACCTCCTGGAATAATGGTGGGGGAACCCAGCATTTCCCCTGCACTTCCTGCTTTGGAGGCATCCTCTGAGAGAAGAACTGTTGTTCCATCTATTACTCGTGTTAATACAGCTGCCTCATATGGCCTGGACCAACTTGAATCTGAAGGTATTCATGCTTTGAAGGGGATCTTTTCAAGGACTGGTTGAGTGAGTCACTGAGCAAATGTTTTTGAAAAAGAATTAAGTAGGAGTATATTCAATCTGCAGTATAGATcagaggacagtaaactacagctgggccaaatctggcctgccacttgtttttgaatggtttgtaagctaagaatggtttttacattttgaaatgattgaaaaaaaaagtcaaaagaagaataatattttgtgacatagaaaagttataaaaattcaaattccagtgttcataaataaagctatattggaacacagcca</dnaseq>| | sequence = <dnaseq>CAGTCGTCCCTTTGTCTTTTGAAGTTACTCCCACTGTGGAAGAACAAATGGACACAGTCACAGGGCCAAATGAGGAGTTCACACCAGTTCTGGGATCTCCAGTGACACCTCCTGGAATAATGGTGGGGGAACCCAGCATTTCCCCTGCACTTCCTGCTTTGGAGGCATCCTCTGAGAGAAGAACTGTTGTTCCATCTATTACTCGTGTTAATACAGCTGCCTCATATGGCCTGGACCAACTTGAATCTGAAGGTATTCATGCTTTGAAGGGGATCTTTTCAAGGACTGGTTGAGTGAGTCACTGAGCAAATGTTTTTGAAAAAGAATTAAGTAGGAGTATATTCAATCTGCAGTATAGATcagaggacagtaaactacagctgggccaaatctggcctgccacttgtttttgaatggtttgtaagctaagaatggtttttacattttgaaatgattgaaaaaaaaagtcaaaagaagaataatattttgtgacatagaaaagttataaaaattcaaattccagtgttcataaataaagctatattggaacacagcca</dnaseq>| | ||
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| − | [[Category:Sense]] | + | [[Category:Sense]][[Category:NONHSAG015096]] |
Revision as of 11:36, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
NONHSAT037103 |
| Source |
NONCODE4.0 |
| Same with |
, |
| Classification |
sense |
| Length |
557 nt |
| Genomic location |
chr14-:58597925..58599849 |
| Exon number |
2 |
| Exons |
58597925..58598439,58599808..58599849 |
| Genome context |
|
| Sequence |
000001 CAGTCGTCCC TTTGTCTTTT GAAGTTACTC CCACTGTGGA AGAACAAATG GACACAGTCA CAGGGCCAAA TGAGGAGTTC 000080
000081 ACACCAGTTC TGGGATCTCC AGTGACACCT CCTGGAATAA TGGTGGGGGA ACCCAGCATT TCCCCTGCAC TTCCTGCTTT 000160 000161 GGAGGCATCC TCTGAGAGAA GAACTGTTGT TCCATCTATT ACTCGTGTTA ATACAGCTGC CTCATATGGC CTGGACCAAC 000240 000241 TTGAATCTGA AGGTATTCAT GCTTTGAAGG GGATCTTTTC AAGGACTGGT TGAGTGAGTC ACTGAGCAAA TGTTTTTGAA 000320 000321 AAAGAATTAA GTAGGAGTAT ATTCAATCTG CAGTATAGAT cagaggacag taaactacag ctgggccaaa tctggcctgc 000400 000401 cacttgtttt tgaatggttt gtaagctaag aatggttttt acattttgaa atgattgaaa aaaaaagtca aaagaagaat 000480 000481 aatattttgt gacatagaaa agttataaaa attcaaattc cagtgttcat aaataaagct atattggaac acagcca |
Predicted Small Protein
| Name | NONHSAT037103_smProtein_47:292 |
| Length | 82 |
| Molecular weight | 8406.3818 |
| Aromaticity | 0.037037037037 |
| Instability index | 53.6481481481 |
| Isoelectric point | 4.67803955078 |
| Runs | 13 |
| Runs residual | 0.0183141198594 |
| Runs probability | 0.0235280529398 |
| Amino acid sequence | MDTVTGPNEEFTPVLGSPVTPPGIMVGEPSISPALPALEASSERRTVVPSITRVNTAASY GLDQLESEGIHALKGIFSRTG |
| Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLEEELLLLLLLLLLLLLLLLLLLEEEEEEEEELLHHHL LLLLHHHHLLLHHHLEEELLL |
| PRMN | - |
| PiMo | - |
